mRNA_L-elsbetiae_contig11816.1568.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: D7FX01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX01_ECTSI) HSP 1 Score: 488 bits (1256), Expect = 2.100e-169 Identity = 241/262 (91.98%), Postives = 255/262 (97.33%), Query Frame = 1
Query: 1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQVRASAPL 786
+DGVSKQLPGGRQLFADASL+F+RGAK+GVLGVNGSGKSTVLKI+AG +KEFDG+MWTRDGLR+KYLPQEPDLDSSLNVMENIRRGIAEQEN+V RFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAF+GTVISITHDRYFLDNVAGWILEVDRGSLLP+KGNYSAWL+QKQNRLD EHSKQ + + L
Sbjct: 1 MDGVSKQLPGGRQLFADASLTFMRGAKIGVLGVNGSGKSTVLKIIAGEDKEFDGDMWTRDGLRVKYLPQEPDLDSSLNVMENIRRGIAEQENMVARFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFKGTVISITHDRYFLDNVAGWILEVDRGSLLPFKGNYSAWLVQKQNRLDREHSKQAQVAKRL 262
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A6H5JQX9_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQX9_9PHAE) HSP 1 Score: 484 bits (1247), Expect = 1.180e-165 Identity = 239/262 (91.22%), Postives = 255/262 (97.33%), Query Frame = 1
Query: 1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQVRASAPL 786
+DGVSKQLPGGRQLFADASL+F+RGAK+GVLGVNGSGKSTVLKI+AG +KEFDG+MWTRDGLR+KYLPQEPDLDSSLNVM+NIRRGIAEQE+LV RFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAF+GTVISITHDRYFLDNVAGWILEVDRGSLLP++GNYSAWL+QKQNRLD EHSKQ + + L
Sbjct: 174 MDGVSKQLPGGRQLFADASLTFMRGAKIGVLGVNGSGKSTVLKIIAGEDKEFDGDMWTRDGLRVKYLPQEPDLDSSLNVMDNIRRGIAEQEDLVARFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFKGTVISITHDRYFLDNVAGWILEVDRGSLLPFRGNYSAWLVQKQNRLDREHSKQAQVAKRL 435
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A835ZAC8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC8_9STRA) HSP 1 Score: 347 bits (891), Expect = 1.130e-113 Identity = 168/248 (67.74%), Postives = 201/248 (81.05%), Query Frame = 1
Query: 10 VSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDME 753
V K+LPGGR LF SL+F GAK+GVLG NG GKS+++KI+AG++ EFDG +W R GL+I YLPQEP LD L+VM N+R GIAEQE L+ RF+ AMGDPDAD DALL EQAALQ +I+D AW LQH V+IAM +L VPP +PV LSGGE+RRVALCR+LLE+PDV++LDEPTNHLDAE RWLE YL+AFRG VIS+THDRYFLDNVA WILE+DRG+ +PY+GNYSAWL KQ RL++E
Sbjct: 48 VRKRLPGGRTLFDGVSLNFNHGAKIGVLGANGCGKSSLMKILAGLDAEFDGALWRRPGLKILYLPQEPQLDPDLDVMGNVRLGIAEQEALLARFDAISAAMGDPDADFDALLTEQAALQTRIDDLGAWALQHEVEIAMARLHVPPPRAPVASLSGGERRRVALCRMLLEKPDVLILDEPTNHLDAECTRWLETYLQAFRGMVISVTHDRYFLDNVASWILEIDRGATIPYEGNYSAWLAAKQRRLNVE 295
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A0N7L7Z3_PLAHL (Abc transporter atp-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7Z3_PLAHL) HSP 1 Score: 339 bits (870), Expect = 9.290e-111 Identity = 161/256 (62.89%), Postives = 201/256 (78.52%), Query Frame = 1
Query: 1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQV 768
L V +PGG++LF SL F+RGAK+GVLG NGSGKST+LKI+AGV K+FDG+ W +DGL++ YLPQEP LD + NV ENI G+ E + L+TRF+E +A+G+PDAD DALLEEQA LQ +IE+ W+L H V AM LRVP D+ +D LSGGEKRRVALCRLLLE+PD++LLDEPTNHLDAESV WLE+YL +RGTV+SITHDRYFLDNVAGW++E+DRG Y+GNY+ WL Q++NR +M+ V
Sbjct: 31 LQDVGMTIPGGKKLFERISLGFLRGAKIGVLGPNGSGKSTLLKIIAGVHKDFDGDRWIKDGLKVGYLPQEPQLDPTKNVYENIMDGLKESQTLLTRFDEVSMALGEPDADFDALLEEQAMLQDQIENLGCWDLSHEVAKAMAALRVPAADANIDDLSGGEKRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLENYLNKYRGTVLSITHDRYFLDNVAGWVMELDRGQTYAYQGNYTEWLKQRRNRFNMQRKSDV 286
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: H3GIT5_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GIT5_PHYRM) HSP 1 Score: 339 bits (870), Expect = 2.040e-110 Identity = 163/259 (62.93%), Postives = 205/259 (79.15%), Query Frame = 1
Query: 1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEH-SKQVRA 774
L V +PGG++LF SL F+RGAK+GVLG NGSGKST+LK++AGV +FDGE W +DGL++ YLPQEP LD S NV ENI G+ E + L+ +F+E +AMG+PDAD DALLEEQA LQ +IE + W+L H V+ AM LRVP D+ V+ LSGGE+RRVALCRLLLE+PD++LLDEPTNHLDAESV WLED+L+ +RGTV+SITHDRYFLDNVAGW+LE+DRG Y+GNY+AWL Q++NR +M+ S +RA
Sbjct: 60 LRDVGVVIPGGKKLFERVSLGFLRGAKIGVLGPNGSGKSTLLKVIAGVRSDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMEGLKESQTLLAKFDEVSMAMGEPDADFDALLEEQAKLQDQIEHLNCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTAWLTQRRNRFNMQRKSDAIRA 318
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A662XES6_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XES6_9STRA) HSP 1 Score: 337 bits (865), Expect = 1.740e-109 Identity = 159/256 (62.11%), Postives = 201/256 (78.52%), Query Frame = 1
Query: 1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQV 768
L V + GG++LF SL F+RGAK+GVLG NGSGKST++K++AG K+FDGE W +DGL++ YLPQEP LD S NV ENI G+ E + L+ RF+E +AMG+PDAD DALLEEQA LQ +IE W+L H V+ AM LRVP D+ V+ LSGGE+RRVALCRLLLE+PD++LLDEPTNHLDAESV WLE++L+ +RGTV+SITHDRYFLDNVAGW+LE+DRG Y+GNY+ WL+Q++NRL+M+ V
Sbjct: 77 LKDVGVTIQGGKKLFEHVSLGFLRGAKIGVLGPNGSGKSTLIKVVAGARKDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMEGLKESQTLLARFDEVSMAMGEPDADFDALLEEQAKLQDQIEHLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEEFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETFAYEGNYTQWLVQRRNRLNMQRKSDV 332
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A3R7HUG3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HUG3_9STRA) HSP 1 Score: 333 bits (855), Expect = 1.630e-108 Identity = 160/259 (61.78%), Postives = 206/259 (79.54%), Query Frame = 1
Query: 1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEH-SKQVRA 774
L V + GG++LF SL F+RGAK+GVLG NG+GKST++K++AGV +FDGE W +DGL++ YLPQEP LD + NV ENI G+ E ++L+TRF+E +AMG+PDAD DALL+EQA LQ +IE W+L + V+ AM LRVP D+ V+ LSGGE+RRVALCRLLLE+PD++LLDEPTNHLDAESV WLED+L+ +RGTV+SITHDRYFLDNVAGW+LE+DRG Y+GNY+AWL Q++NRL+M+ S +RA
Sbjct: 32 LRDVGVTIAGGKKLFEQVSLGFLRGAKIGVLGPNGTGKSTLIKVIAGVRNDFDGERWVKDGLKVGYLPQEPQLDPNKNVYENIMDGLKESQDLLTRFDEVSMAMGEPDADFDALLDEQAKLQDQIEHLGCWDLSYEVEKAMAALRVPAHDADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTAWLTQRRNRLNMQRKSDAIRA 290
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A8K1FE21_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE21_PYTOL) HSP 1 Score: 332 bits (850), Expect = 1.900e-107 Identity = 163/259 (62.93%), Postives = 203/259 (78.38%), Query Frame = 1
Query: 1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEH-SKQVRA 774
L V +PGG++LF SL F+RGAK+GVLG NG+GKST+LKI+AGV KEFDGE W +DGLR+ YL QEP LD + NV ENI G+ E +L+ RF+E +AMG+PDAD D LL EQA LQ KI+ + W+L H V+ AM LRVPP D V+ LSGGE+RRVALCRLLLE+PD++LLDEPTNHLDAESV WLE++L+ ++GTV+SITHDRYFLDNVAGW+LE+DRG Y+GNY+ WL Q++NRL+M+ S VRA
Sbjct: 58 LKDVGVTIPGGKKLFERVSLGFLRGAKIGVLGPNGTGKSTLLKIIAGVRKEFDGERWVKDGLRVGYLAQEPYLDPNKNVYENIMDGLKETTDLLERFDEVSMAMGEPDADFDTLLAEQAELQDKIDHLNCWDLSHEVEKAMAALRVPPRDGDVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEEFLQNYKGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTKWLQQRRNRLNMQRKSDAVRA 316
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A662Y3T7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y3T7_9STRA) HSP 1 Score: 337 bits (865), Expect = 2.480e-107 Identity = 159/256 (62.11%), Postives = 201/256 (78.52%), Query Frame = 1
Query: 1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQV 768
L V + GG++LF SL F+RGAK+GVLG NGSGKST++K++AG K+FDGE W +DGL++ YLPQEP LD S NV ENI G+ E + L+ RF+E +AMG+PDAD DALLEEQA LQ +IE W+L H V+ AM LRVP D+ V+ LSGGE+RRVALCRLLLE+PD++LLDEPTNHLDAESV WLE++L+ +RGTV+SITHDRYFLDNVAGW+LE+DRG Y+GNY+ WL+Q++NRL+M+ V
Sbjct: 76 LKDVGVTIQGGKKLFEHVSLGFLRGAKIGVLGPNGSGKSTLIKVIAGARKDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMEGLKESQTLLARFDEVSMAMGEPDADFDALLEEQAQLQDQIEHLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEEFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETFAYEGNYTQWLVQRRNRLNMQRKSDV 331
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: W7TRE6_9STRA (Abc transporter atp-binding protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRE6_9STRA) HSP 1 Score: 331 bits (848), Expect = 4.010e-107 Identity = 160/262 (61.07%), Postives = 203/262 (77.48%), Query Frame = 1
Query: 1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQVRASAPL 786
L V+K LPGGR L D LSF RGAK+GVLGVNGSGKS++LKI++GV++E G +W + ++ YL QEP LD +L+V N+R GIAEQE LV +F+E + MG+ DADLD LLEEQA LQ +IE D WN++HRVD M+ L +PP D+ + LSGGE+RRVALCR+LLEQPDV+LLDEPTNHLDA+SV WLE +L+ +RGTVI++THDRYFLDN+A W+LEVDRGSLLP++GNY+ WL K RLD+E K+ + L
Sbjct: 49 LSDVTKVLPGGRVLLKDTRLSFFRGAKIGVLGVNGSGKSSLLKIISGVDQEHHGVVWRKPDVKFMYLAQEPQLDPALDVKGNVRLGIAEQEALVQKFDEIAMKMGETDADLDKLLEEQAELQGRIEALDCWNVEHRVDTVMKALHLPPPDASIISLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVAWLERFLQEYRGTVIAVTHDRYFLDNIARWVLEVDRGSLLPFQGNYTQWLEHKAARLDLERGKEAAQARAL 310 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11816.1568.1 >prot_L-elsbetiae_contig11816.1568.1 ID=prot_L-elsbetiae_contig11816.1568.1|Name=mRNA_L-elsbetiae_contig11816.1568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKback to top mRNA from alignment at L-elsbetiae_contig11816:2882..5843+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11816.1568.1 ID=mRNA_L-elsbetiae_contig11816.1568.1|Name=mRNA_L-elsbetiae_contig11816.1568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2962bp|location=Sequence derived from alignment at L-elsbetiae_contig11816:2882..5843+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11816:2882..5843+ >mRNA_L-elsbetiae_contig11816.1568.1 ID=mRNA_L-elsbetiae_contig11816.1568.1|Name=mRNA_L-elsbetiae_contig11816.1568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig11816:2882..5843+ (Laminarionema elsbetiae ELsaHSoW15)back to top |