mRNA_L-elsbetiae_contig11816.1568.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11816.1568.1
Unique NamemRNA_L-elsbetiae_contig11816.1568.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: D7FX01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX01_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 2.100e-169
Identity = 241/262 (91.98%), Postives = 255/262 (97.33%), Query Frame = 1
Query:    1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQVRASAPL 786
            +DGVSKQLPGGRQLFADASL+F+RGAK+GVLGVNGSGKSTVLKI+AG +KEFDG+MWTRDGLR+KYLPQEPDLDSSLNVMENIRRGIAEQEN+V RFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAF+GTVISITHDRYFLDNVAGWILEVDRGSLLP+KGNYSAWL+QKQNRLD EHSKQ + +  L
Sbjct:    1 MDGVSKQLPGGRQLFADASLTFMRGAKIGVLGVNGSGKSTVLKIIAGEDKEFDGDMWTRDGLRVKYLPQEPDLDSSLNVMENIRRGIAEQENMVARFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFKGTVISITHDRYFLDNVAGWILEVDRGSLLPFKGNYSAWLVQKQNRLDREHSKQAQVAKRL 262          
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A6H5JQX9_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQX9_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 1.180e-165
Identity = 239/262 (91.22%), Postives = 255/262 (97.33%), Query Frame = 1
Query:    1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQVRASAPL 786
            +DGVSKQLPGGRQLFADASL+F+RGAK+GVLGVNGSGKSTVLKI+AG +KEFDG+MWTRDGLR+KYLPQEPDLDSSLNVM+NIRRGIAEQE+LV RFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAF+GTVISITHDRYFLDNVAGWILEVDRGSLLP++GNYSAWL+QKQNRLD EHSKQ + +  L
Sbjct:  174 MDGVSKQLPGGRQLFADASLTFMRGAKIGVLGVNGSGKSTVLKIIAGEDKEFDGDMWTRDGLRVKYLPQEPDLDSSLNVMDNIRRGIAEQEDLVARFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFKGTVISITHDRYFLDNVAGWILEVDRGSLLPFRGNYSAWLVQKQNRLDREHSKQAQVAKRL 435          
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A835ZAC8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC8_9STRA)

HSP 1 Score: 347 bits (891), Expect = 1.130e-113
Identity = 168/248 (67.74%), Postives = 201/248 (81.05%), Query Frame = 1
Query:   10 VSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDME 753
            V K+LPGGR LF   SL+F  GAK+GVLG NG GKS+++KI+AG++ EFDG +W R GL+I YLPQEP LD  L+VM N+R GIAEQE L+ RF+    AMGDPDAD DALL EQAALQ +I+D  AW LQH V+IAM +L VPP  +PV  LSGGE+RRVALCR+LLE+PDV++LDEPTNHLDAE  RWLE YL+AFRG VIS+THDRYFLDNVA WILE+DRG+ +PY+GNYSAWL  KQ RL++E
Sbjct:   48 VRKRLPGGRTLFDGVSLNFNHGAKIGVLGANGCGKSSLMKILAGLDAEFDGALWRRPGLKILYLPQEPQLDPDLDVMGNVRLGIAEQEALLARFDAISAAMGDPDADFDALLTEQAALQTRIDDLGAWALQHEVEIAMARLHVPPPRAPVASLSGGERRRVALCRMLLEKPDVLILDEPTNHLDAECTRWLETYLQAFRGMVISVTHDRYFLDNVASWILEIDRGATIPYEGNYSAWLAAKQRRLNVE 295          
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A0N7L7Z3_PLAHL (Abc transporter atp-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7Z3_PLAHL)

HSP 1 Score: 339 bits (870), Expect = 9.290e-111
Identity = 161/256 (62.89%), Postives = 201/256 (78.52%), Query Frame = 1
Query:    1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQV 768
            L  V   +PGG++LF   SL F+RGAK+GVLG NGSGKST+LKI+AGV K+FDG+ W +DGL++ YLPQEP LD + NV ENI  G+ E + L+TRF+E  +A+G+PDAD DALLEEQA LQ +IE+   W+L H V  AM  LRVP  D+ +D LSGGEKRRVALCRLLLE+PD++LLDEPTNHLDAESV WLE+YL  +RGTV+SITHDRYFLDNVAGW++E+DRG    Y+GNY+ WL Q++NR +M+    V
Sbjct:   31 LQDVGMTIPGGKKLFERISLGFLRGAKIGVLGPNGSGKSTLLKIIAGVHKDFDGDRWIKDGLKVGYLPQEPQLDPTKNVYENIMDGLKESQTLLTRFDEVSMALGEPDADFDALLEEQAMLQDQIENLGCWDLSHEVAKAMAALRVPAADANIDDLSGGEKRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLENYLNKYRGTVLSITHDRYFLDNVAGWVMELDRGQTYAYQGNYTEWLKQRRNRFNMQRKSDV 286          
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: H3GIT5_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GIT5_PHYRM)

HSP 1 Score: 339 bits (870), Expect = 2.040e-110
Identity = 163/259 (62.93%), Postives = 205/259 (79.15%), Query Frame = 1
Query:    1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEH-SKQVRA 774
            L  V   +PGG++LF   SL F+RGAK+GVLG NGSGKST+LK++AGV  +FDGE W +DGL++ YLPQEP LD S NV ENI  G+ E + L+ +F+E  +AMG+PDAD DALLEEQA LQ +IE  + W+L H V+ AM  LRVP  D+ V+ LSGGE+RRVALCRLLLE+PD++LLDEPTNHLDAESV WLED+L+ +RGTV+SITHDRYFLDNVAGW+LE+DRG    Y+GNY+AWL Q++NR +M+  S  +RA
Sbjct:   60 LRDVGVVIPGGKKLFERVSLGFLRGAKIGVLGPNGSGKSTLLKVIAGVRSDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMEGLKESQTLLAKFDEVSMAMGEPDADFDALLEEQAKLQDQIEHLNCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTAWLTQRRNRFNMQRKSDAIRA 318          
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A662XES6_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XES6_9STRA)

HSP 1 Score: 337 bits (865), Expect = 1.740e-109
Identity = 159/256 (62.11%), Postives = 201/256 (78.52%), Query Frame = 1
Query:    1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQV 768
            L  V   + GG++LF   SL F+RGAK+GVLG NGSGKST++K++AG  K+FDGE W +DGL++ YLPQEP LD S NV ENI  G+ E + L+ RF+E  +AMG+PDAD DALLEEQA LQ +IE    W+L H V+ AM  LRVP  D+ V+ LSGGE+RRVALCRLLLE+PD++LLDEPTNHLDAESV WLE++L+ +RGTV+SITHDRYFLDNVAGW+LE+DRG    Y+GNY+ WL+Q++NRL+M+    V
Sbjct:   77 LKDVGVTIQGGKKLFEHVSLGFLRGAKIGVLGPNGSGKSTLIKVVAGARKDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMEGLKESQTLLARFDEVSMAMGEPDADFDALLEEQAKLQDQIEHLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEEFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETFAYEGNYTQWLVQRRNRLNMQRKSDV 332          
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A3R7HUG3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HUG3_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.630e-108
Identity = 160/259 (61.78%), Postives = 206/259 (79.54%), Query Frame = 1
Query:    1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEH-SKQVRA 774
            L  V   + GG++LF   SL F+RGAK+GVLG NG+GKST++K++AGV  +FDGE W +DGL++ YLPQEP LD + NV ENI  G+ E ++L+TRF+E  +AMG+PDAD DALL+EQA LQ +IE    W+L + V+ AM  LRVP  D+ V+ LSGGE+RRVALCRLLLE+PD++LLDEPTNHLDAESV WLED+L+ +RGTV+SITHDRYFLDNVAGW+LE+DRG    Y+GNY+AWL Q++NRL+M+  S  +RA
Sbjct:   32 LRDVGVTIAGGKKLFEQVSLGFLRGAKIGVLGPNGTGKSTLIKVIAGVRNDFDGERWVKDGLKVGYLPQEPQLDPNKNVYENIMDGLKESQDLLTRFDEVSMAMGEPDADFDALLDEQAKLQDQIEHLGCWDLSYEVEKAMAALRVPAHDADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEDFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTAWLTQRRNRLNMQRKSDAIRA 290          
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A8K1FE21_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE21_PYTOL)

HSP 1 Score: 332 bits (850), Expect = 1.900e-107
Identity = 163/259 (62.93%), Postives = 203/259 (78.38%), Query Frame = 1
Query:    1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEH-SKQVRA 774
            L  V   +PGG++LF   SL F+RGAK+GVLG NG+GKST+LKI+AGV KEFDGE W +DGLR+ YL QEP LD + NV ENI  G+ E  +L+ RF+E  +AMG+PDAD D LL EQA LQ KI+  + W+L H V+ AM  LRVPP D  V+ LSGGE+RRVALCRLLLE+PD++LLDEPTNHLDAESV WLE++L+ ++GTV+SITHDRYFLDNVAGW+LE+DRG    Y+GNY+ WL Q++NRL+M+  S  VRA
Sbjct:   58 LKDVGVTIPGGKKLFERVSLGFLRGAKIGVLGPNGTGKSTLLKIIAGVRKEFDGERWVKDGLRVGYLAQEPYLDPNKNVYENIMDGLKETTDLLERFDEVSMAMGEPDADFDTLLAEQAELQDKIDHLNCWDLSHEVEKAMAALRVPPRDGDVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEEFLQNYKGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTKWLQQRRNRLNMQRKSDAVRA 316          
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: A0A662Y3T7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y3T7_9STRA)

HSP 1 Score: 337 bits (865), Expect = 2.480e-107
Identity = 159/256 (62.11%), Postives = 201/256 (78.52%), Query Frame = 1
Query:    1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQV 768
            L  V   + GG++LF   SL F+RGAK+GVLG NGSGKST++K++AG  K+FDGE W +DGL++ YLPQEP LD S NV ENI  G+ E + L+ RF+E  +AMG+PDAD DALLEEQA LQ +IE    W+L H V+ AM  LRVP  D+ V+ LSGGE+RRVALCRLLLE+PD++LLDEPTNHLDAESV WLE++L+ +RGTV+SITHDRYFLDNVAGW+LE+DRG    Y+GNY+ WL+Q++NRL+M+    V
Sbjct:   76 LKDVGVTIQGGKKLFEHVSLGFLRGAKIGVLGPNGSGKSTLIKVIAGARKDFDGERWVKDGLKVGYLPQEPQLDPSKNVYENIMEGLKESQTLLARFDEVSMAMGEPDADFDALLEEQAQLQDQIEHLGCWDLSHEVEKAMAALRVPAADADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVHWLEEFLQKYRGTVLSITHDRYFLDNVAGWVLELDRGETFAYEGNYTQWLVQRRNRLNMQRKSDV 331          
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Match: W7TRE6_9STRA (Abc transporter atp-binding protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRE6_9STRA)

HSP 1 Score: 331 bits (848), Expect = 4.010e-107
Identity = 160/262 (61.07%), Postives = 203/262 (77.48%), Query Frame = 1
Query:    1 LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEKEFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDMEHSKQVRASAPL 786
            L  V+K LPGGR L  D  LSF RGAK+GVLGVNGSGKS++LKI++GV++E  G +W +  ++  YL QEP LD +L+V  N+R GIAEQE LV +F+E  + MG+ DADLD LLEEQA LQ +IE  D WN++HRVD  M+ L +PP D+ +  LSGGE+RRVALCR+LLEQPDV+LLDEPTNHLDA+SV WLE +L+ +RGTVI++THDRYFLDN+A W+LEVDRGSLLP++GNY+ WL  K  RLD+E  K+   +  L
Sbjct:   49 LSDVTKVLPGGRVLLKDTRLSFFRGAKIGVLGVNGSGKSSLLKIISGVDQEHHGVVWRKPDVKFMYLAQEPQLDPALDVKGNVRLGIAEQEALVQKFDEIAMKMGETDADLDKLLEEQAELQGRIEALDCWNVEHRVDTVMKALHLPPPDASIISLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVAWLERFLQEYRGTVIAVTHDRYFLDNIARWVLEVDRGSLLPFQGNYTQWLEHKAARLDLERGKEAAQARAL 310          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11816.1568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX01_ECTSI2.100e-16991.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQX9_9PHAE1.180e-16591.22ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835ZAC8_9STRA1.130e-11367.74P-loop containing nucleoside triphosphate hydrolas... [more]
A0A0N7L7Z3_PLAHL9.290e-11162.89Abc transporter atp-binding protein n=1 Tax=Plasmo... [more]
H3GIT5_PHYRM2.040e-11062.93Uncharacterized protein n=24 Tax=Peronosporaceae T... [more]
A0A662XES6_9STRA1.740e-10962.11Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A3R7HUG3_9STRA1.630e-10861.78Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A8K1FE21_PYTOL1.900e-10762.93Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662Y3T7_9STRA2.480e-10762.11Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
W7TRE6_9STRA4.010e-10761.07Abc transporter atp-binding protein n=2 Tax=Nannoc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11816contigL-elsbetiae_contig11816:2882..5843 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score491.5
Seed ortholog evalue2.5e-136
Seed eggNOG ortholog2880.D7FX01
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATPase activity
EggNOG OGsCOG0488@1,KOG0927@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-10_003770.1
Exons6
Model size798
Cds size798
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11816.1568.1prot_L-elsbetiae_contig11816.1568.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11816 2882..5843 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815384.959529-CDS-L-elsbetiae_contig11816:2881..30261622815384.959529-CDS-L-elsbetiae_contig11816:2881..3026Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 2882..3026 +
1691682872.0904372-CDS-L-elsbetiae_contig11816:2881..30261691682872.0904372-CDS-L-elsbetiae_contig11816:2881..3026Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 2882..3026 +
1622815384.970958-CDS-L-elsbetiae_contig11816:3429..35541622815384.970958-CDS-L-elsbetiae_contig11816:3429..3554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 3430..3554 +
1691682872.1032913-CDS-L-elsbetiae_contig11816:3429..35541691682872.1032913-CDS-L-elsbetiae_contig11816:3429..3554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 3430..3554 +
1622815384.9830825-CDS-L-elsbetiae_contig11816:3828..39601622815384.9830825-CDS-L-elsbetiae_contig11816:3828..3960Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 3829..3960 +
1691682872.1135805-CDS-L-elsbetiae_contig11816:3828..39601691682872.1135805-CDS-L-elsbetiae_contig11816:3828..3960Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 3829..3960 +
1622815384.9943264-CDS-L-elsbetiae_contig11816:4406..45701622815384.9943264-CDS-L-elsbetiae_contig11816:4406..4570Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 4407..4570 +
1691682872.1247687-CDS-L-elsbetiae_contig11816:4406..45701691682872.1247687-CDS-L-elsbetiae_contig11816:4406..4570Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 4407..4570 +
1622815385.0047214-CDS-L-elsbetiae_contig11816:5201..52701622815385.0047214-CDS-L-elsbetiae_contig11816:5201..5270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 5202..5270 +
1691682872.1350327-CDS-L-elsbetiae_contig11816:5201..52701691682872.1350327-CDS-L-elsbetiae_contig11816:5201..5270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 5202..5270 +
1622815385.0138166-CDS-L-elsbetiae_contig11816:5680..58431622815385.0138166-CDS-L-elsbetiae_contig11816:5680..5843Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 5681..5843 +
1691682872.1432135-CDS-L-elsbetiae_contig11816:5680..58431691682872.1432135-CDS-L-elsbetiae_contig11816:5680..5843Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11816 5681..5843 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11816.1568.1

>prot_L-elsbetiae_contig11816.1568.1 ID=prot_L-elsbetiae_contig11816.1568.1|Name=mRNA_L-elsbetiae_contig11816.1568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp
LDGVSKQLPGGRQLFADASLSFVRGAKVGVLGVNGSGKSTVLKIMAGVEK
EFDGEMWTRDGLRIKYLPQEPDLDSSLNVMENIRRGIAEQENLVTRFEET
GIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGD
SPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRA
FRGTVISITHDRYFLDNVAGWILEVDRGSLLPYKGNYSAWLLQKQNRLDM
EHSKQVRASAPLPLI*
back to top

mRNA from alignment at L-elsbetiae_contig11816:2882..5843+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11816.1568.1 ID=mRNA_L-elsbetiae_contig11816.1568.1|Name=mRNA_L-elsbetiae_contig11816.1568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2962bp|location=Sequence derived from alignment at L-elsbetiae_contig11816:2882..5843+ (Laminarionema elsbetiae ELsaHSoW15)
TTGGACGGGGTATCGAAACAGCTGCCAGGGGGCAGGCAACTCTTTGCGGA CGCGAGCCTTAGCTTCGTTAGGGGTGCGAAGGTCGGCGTGCTCGGCGTGA ACGGCAGCGGGAAGAGCACTGTGCTCAAGATCATGGCGGGCGTAGGTAAG GACATCCATGGATAGCCACGGTGACAACAACAGCAGCAGCAGCAACAACA ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC AACAACAACAACAACAACAACAACAACAACAACAACAACAGCAGCAGCAA TAACGACAATCGCGCTTCGTGTACGTGTTGGAGCCTCCGCCTTCGGGCAG AGGGTAGACAGTTGGAGTCACACGGCGGTTGGTTTCGCCCGCGGTACAGC AACACACAAAGAGCGAAACAGAGGCGACGACAAGTTTGAATCCCAAGGGA GGGCCGTGTAACTTGCTTCCTTTATTTTAGGCTCAGGCCTGTTGTCGCTC TTCAGAAACCCGTGCGCCTTGGTGTTGTTATTGTTGTTCTGCGTGCAGAG AAGGAGTTTGACGGCGAGATGTGGACCCGGGACGGACTCCGGATCAAGTA CCTCCCGCAAGAGCCGGACCTTGACTCCTCCCTGAACGTCATGGAAAACA TCCGCCGTGGCATCGCCGAGCAGGTTGGGGGTGGGGGGGGGGGGCGTTTC GCTACGATTAGTTAGCGGAAGGGTTGCAGGCCTCCTCTAGCATTCGTCGA CAACACTGAATTTGTTCTCTGCCCTCTCCGAAGAGGCGACGGGGCGAGGT GAACGCTCTCAGAAACGAGGATGTACTTCGAAGTTTGTACCTAAATAGCG CGAATGGGCGACAGCATTAGAGCAAGCACGCTTCCACCCATCCAGCTCCA CCGAGACGCTAACCTTCCTCTCTCGCCTGCTCACCCGGTACAACCAGGAG AACCTCGTGACGCGTTTCGAGGAAACTGGCATCGCCATGGGTGATCCCGA CGCGGACCTGGACGCTTTGTTGGAAGAGCAGGCAGCGCTGCAGGCCAAGA TCGAAGATGCCGACGCGTGGAATCTTCAGGTTGACTACATAAGCTGTTCG CAGCCAAGCTTTCTCGTGTATTTATGTAGGCGTAGGCTTGGGCGGGCCCG GTGGGGGAGTAGACGCTCGTTTTCATTACACGGCCTCCGAGATGCAACGC GTTGGGCCACGTGTGTTCGGGTCGGCTTCTGCACGGACGACGGGTGGTGG GACGTGAGAAACAAAACAAAACAAAAATAGACTCTCAGCACAGCACCTCC CCTCCTTATCACTCCCTCTCCTGGCCCGCAGCCTCACACACCATCCCAGC CCCGATGTCCGCCGAAAGGCAAAAAAAATACACCCAAAACCTGTTACGAC AGTTGTCGACAAGGGCTATAACTTCATCCGCCCCGTCCCGCCGCCCGCCG CCCGCCGCCCGACCCCTTTCCGTCCCGCCGCGTGCTACAACACGATAATA TCATCATCAAACACGAACAAAAAAGCACCGGGTCGACATCGCGATGAGGA AGTTGAGGGTGCCGCCGGGGGACTCGCCCGTCGACCAGCTGTCCGGCGGG GAGAAGAGGCGGGTGGCCCTCTGCAGGCTGCTGCTGGAGCAGCCGGACGT CATCCTGCTCGACGAGCCGACTAACCACCTCGACGCGGAGTGAGTGCGGC CACTGACTGCGCTGCCTTGTGTATACTCTTGGAGTCGGTTGTTTTGCGGT TGTTGGCCGGCCTCGTTGGGGGGGTGCGGTGTGGTTGTTGTTGTTACCGC CGGGTGGTTCTAGCGTAAGCTCACACTTAGCGTTGCCCTCCCGTCTCCAT GCAAGTCCCGGAAAGCCCCCGTTTTGAGAGATGCGGAAACGCCCCCACTA GAGCTGGAGCGTATGGTTTCTGCGACTTGTGCTTTCGTCGGGAGTGGCAA GCGGAGGGAGGCCGTGAAATATGTAGAGTGGGCCACGGTGGTCGATACAG AACGGAAGGACAAGACTTCTGACGTCGAACCGTTTCGATGCCGATGTATA TGGTCGACGCGCGAGCGGGCTTGACTGACGGCGAACAGAGGAGGGGCGGA ACACGTCTTTTGAGGGCGAGTGATTGGCACGCACAGACAGCAGCGAGTCT TACCTTGAGTAGGAGACGTGTGAGTGTGCGCTCGTCTTTACGAGAGAGAG CGAGATAATGTAGAAAAGCGTACATACATACATACAAACATAGCGACGAG CCACAGAAGTCCACATTTTTTCAACTATTGTATTTTGCTCGAATTGTCCC CTCCCCACGTACGCCCTCAGGTCAGTCCGTTGGTTGGAGGACTACTTACG GGCCTTCAGGGGCACCGTGATCAGCATCACCCACGACAGGTATATGGGCT GTTTTGTCGCACCTCGGCGAAATACCCGAAGCTCTGCAGGCTATGCGTAT ACGTATGCAGCAAGGCAGCGAGCAGGGCGTACGCCGTGGCGTGCCCAATT CAGAAGCTCGAAAATCGCACTCTGGCCCGCCGCCGGCGCATTTTGACGTT TTGCGGGGGGGGGGGGTCCTGTCCCTACTGTCGCAGAGGGCGCGTTTAGT TGGTTCGCGCTGAAAGGGCGCAGCTTCTCGCGCGTGTTGGTTACGGAGAA GGAGACGGAACAGAGTGCACCCTGCGCCCGTGCGCTGGCCTGCTCTGTCG CTCTCTCACACACACGCACGCACTCCTCCTTTTCGTTCGCTTCTGGTGGT CGATCCGCTATCTGCCGGCGTGATGATGACCGATGGTTTGAGAGCACAGA TATTTCTTGGACAACGTGGCCGGCTGGATTTTGGAGGTGGACAGGGGGTC GCTGCTGCCCTACAAGGGGAACTACTCGGCGTGGCTGCTTCAGAAGCAAA ACCGCCTGGACATGGAGCACTCCAAACAGGTGCGAGCGAGTGCGCCTTTG CCGCTTATATGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig11816:2882..5843+

>mRNA_L-elsbetiae_contig11816.1568.1 ID=mRNA_L-elsbetiae_contig11816.1568.1|Name=mRNA_L-elsbetiae_contig11816.1568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig11816:2882..5843+ (Laminarionema elsbetiae ELsaHSoW15)
TTGGACGGGGTATCGAAACAGCTGCCAGGGGGCAGGCAACTCTTTGCGGA
CGCGAGCCTTAGCTTCGTTAGGGGTGCGAAGGTCGGCGTGCTCGGCGTGA
ACGGCAGCGGGAAGAGCACTGTGCTCAAGATCATGGCGGGCGTAGTTGGA
CGGGGTATCGAAACAGCTGCCAGGGGGCAGGCAACTCTTTGCGGACGCGA
GCCTTAGCTTCGTTAGGGGTGCGAAGGTCGGCGTGCTCGGCGTGAACGGC
AGCGGGAAGAGCACTGTGCTCAAGATCATGGCGGGCGTAGAGAAGGAGTT
TGACGGCGAGATGTGGACCCGGGACGGACTCCGGATCAAGTACCTCCCGC
AAGAGCCGGACCTTGACTCCTCCCTGAACGTCATGGAAAACATCCGCCGT
GGCATCGCCGAGCAGAGAAGGAGTTTGACGGCGAGATGTGGACCCGGGAC
GGACTCCGGATCAAGTACCTCCCGCAAGAGCCGGACCTTGACTCCTCCCT
GAACGTCATGGAAAACATCCGCCGTGGCATCGCCGAGCAGGAGAACCTCG
TGACGCGTTTCGAGGAAACTGGCATCGCCATGGGTGATCCCGACGCGGAC
CTGGACGCTTTGTTGGAAGAGCAGGCAGCGCTGCAGGCCAAGATCGAAGA
TGCCGACGCGTGGAATCTTCAGGAGAACCTCGTGACGCGTTTCGAGGAAA
CTGGCATCGCCATGGGTGATCCCGACGCGGACCTGGACGCTTTGTTGGAA
GAGCAGGCAGCGCTGCAGGCCAAGATCGAAGATGCCGACGCGTGGAATCT
TCAGCACCGGGTCGACATCGCGATGAGGAAGTTGAGGGTGCCGCCGGGGG
ACTCGCCCGTCGACCAGCTGTCCGGCGGGGAGAAGAGGCGGGTGGCCCTC
TGCAGGCTGCTGCTGGAGCAGCCGGACGTCATCCTGCTCGACGAGCCGAC
TAACCACCTCGACGCGGACACCGGGTCGACATCGCGATGAGGAAGTTGAG
GGTGCCGCCGGGGGACTCGCCCGTCGACCAGCTGTCCGGCGGGGAGAAGA
GGCGGGTGGCCCTCTGCAGGCTGCTGCTGGAGCAGCCGGACGTCATCCTG
CTCGACGAGCCGACTAACCACCTCGACGCGGAGTCAGTCCGTTGGTTGGA
GGACTACTTACGGGCCTTCAGGGGCACCGTGATCAGCATCACCCACGACA
GGTCAGTCCGTTGGTTGGAGGACTACTTACGGGCCTTCAGGGGCACCGTG
ATCAGCATCACCCACGACAGATATTTCTTGGACAACGTGGCCGGCTGGAT
TTTGGAGGTGGACAGGGGGTCGCTGCTGCCCTACAAGGGGAACTACTCGG
CGTGGCTGCTTCAGAAGCAAAACCGCCTGGACATGGAGCACTCCAAACAG
GTGCGAGCGAGTGCGCCTTTGCCGCTTATATGAATATTTCTTGGACAACG
TGGCCGGCTGGATTTTGGAGGTGGACAGGGGGTCGCTGCTGCCCTACAAG
GGGAACTACTCGGCGTGGCTGCTTCAGAAGCAAAACCGCCTGGACATGGA
GCACTCCAAACAGGTGCGAGCGAGTGCGCCTTTGCCGCTTATATGA
back to top