mRNA_L-elsbetiae_contig1180.1554.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: D8LEU8_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU8_ECTSI) HSP 1 Score: 377 bits (969), Expect = 3.060e-129 Identity = 182/211 (86.26%), Postives = 192/211 (91.00%), Query Frame = 3 Query: 45 MSDDYSQDSGSRLGDHVGTGGRPLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAIVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSAT 677 MSD+ S DS S+L VGTGGRPLQIGDEIPNFTCESHMG ITLHSYINS WGVIFTYPRNNDPV CTELGMLSKLSEEFDERNCKLLAIGVDSKIGHR+FIKE+QELQDCEL FPIIADASGEIFSLLGL R DA+DP K +VPQTSLL++DLDLRV+MI QYPCTVGHNYYE LRAIDALQQATFNRVG+PANWKEGEDVLVGA V T Sbjct: 1 MSDESSHDSSSKLNGLVGTGGRPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVPQTSLLVIDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVILT 211
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A6U1N900_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N900_9STRA) HSP 1 Score: 238 bits (608), Expect = 5.430e-74 Identity = 110/233 (47.21%), Postives = 158/233 (67.81%), Query Frame = 3 Query: 111 PLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAI---DPAKA---------------IVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPDYD 755 PLQIGDE PNF+C+S +G++T+H + +WG++ T+PR+ DPV TEL M+SKLS+EF+ RN +L I DSK HR +I+E QELQDC++T PI+AD +G++ GL R D + P + IV + + +VD D R++MI YP G N+YE LRAIDA+Q +TF++V PANW++GEDV + K+++T A M+PKG +++R+WFR+TPQPD D Sbjct: 55 PLQIGDEAPNFSCDSTVGLVTMHELVAGNWGLLLTFPRDFDPVGTTELAMVSKLSDEFEARNIVVLGISPDSKTQHRMWIQETQELQDCDITIPILADETGDVLLTYGLVRPDGVLAGPPGEGEDGAVEGEEEGNLQHIVDCSGVFLVDPDKRLRMIQLYPACAGRNFYEILRAIDAIQLSTFHQVSTPANWRQGEDVFIPVKITSTTANSMYPKGFLEIRNWFRLTPQPDLD 287
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A7S2W997_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W997_9STRA) HSP 1 Score: 218 bits (554), Expect = 2.320e-66 Identity = 101/212 (47.64%), Postives = 145/212 (68.40%), Query Frame = 3 Query: 114 LQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAIVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPD 749 LQIGDEIPNF +S +G+ H I+ S+ V+ T+ + DPV TE+GMLSKL +F R+ KL+AI + SK HR +I+EIQELQDC + FPI+AD GE+ L L + A++ K + P T + ++D+D R++ + YP T G N+YET+R++DALQ + F++V +PANW +GE+V V +S+ A MFPKG +L +W+R TPQPD Sbjct: 38 LQIGDEIPNFQADSTVGMFDFHDLIDGSFAVLVTFTGDMDPVGTTEIGMLSKLMMDFRARDAKLVAISIGSKENHRKWIEEIQELQDCRVWFPIVADTDGEVSRLFNLVKPKAVNAKKNLKPATLVTVIDIDRRIRQLQFYPKTTGRNFYETIRSLDALQLSLFHQVVVPANWMQGEEVYVHPGLSSVVASSMFPKGFNELNTWYRPTPQPD 249
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: F0YNL2_AURAN (Thioredoxin domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNL2_AURAN) HSP 1 Score: 210 bits (535), Expect = 1.790e-63 Identity = 95/217 (43.78%), Postives = 145/217 (66.82%), Query Frame = 3 Query: 114 LQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARAD----AIDPAKA-IVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPD 749 LQ+GDEIP+F+ +S +G T H ++ W V+ T+P + + V TE+G LSKL +EF+ RN +++ + ++K HR +I +++++ C++ FP+I+DA EI + LGL + D AKA +VP T ++I D+D RV++ QYP T G N+YE LRA+D +Q + F++V PANW +GEDV +G K+S A FPKG+V+ R W+R TPQPD Sbjct: 33 LQVGDEIPDFSADSSVGKFTYHDMVDGVWSVLVTFPGDREAVATTEMGQLSKLRDEFEARNVRVMGVSCNTKYRHREWIAAVEDIEGCKVAFPLISDADAEISAKLGLVKHDWKKRNFPSAKAALVPATLVVICDIDKRVRLTMQYPTTTGRNFYEVLRAVDTVQLSLFHQVATPANWNQGEDVFIGPKLSRVAAQSAFPKGMVEQRPWYRTTPQPD 249
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A7S2CC88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC88_9STRA) HSP 1 Score: 202 bits (515), Expect = 9.470e-61 Identity = 91/212 (42.92%), Postives = 136/212 (64.15%), Query Frame = 3 Query: 114 LQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAIVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPD 749 LQ+GD++PNF+CE+ G +TLH I W +IFT P+N DP++ + L ++KL EEFD RN + +GVDSK+ H+ ++ + ELQ+ + FPII D +I GL R + D A+VP +++D DL+++ + YP + GHNY E LR ID+LQ + V PANW GED+ + A+VS +A + F KG +++R+WFR+T PD Sbjct: 20 LQLGDDVPNFSCETTQGFVTLHDTIQGKWVMIFTMPKNLDPISVSALAAVAKLKEEFDARNVSVYGLGVDSKMNHKVWVSDTYELQEERVNFPIIVDDKAQISKAFGLVRPNETDFMHALVPCMLCVVIDPDLKMQYMAHYPMSTGHNYKEVLRVIDSLQLTREHPVCTPANWMVGEDIFIKAEVSLNEASERFVKGFLEIRNWFRLTAVPD 231
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A8K1C4E0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4E0_PYTOL) HSP 1 Score: 199 bits (507), Expect = 1.330e-59 Identity = 90/215 (41.86%), Postives = 145/215 (67.44%), Query Frame = 3 Query: 108 RPLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAI--VPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQP 746 + LQIG ++PN ++ +G++ +H Y++ +WGVI T+P+ + PV TELGML KL ++FD RNC++LA+ +DS +F++++ E Q+ +L+FP++AD SGE+ LGL A A A + +P + +++D+DL V+ ++ YP TVG N YE LRA+DA Q ATFN++ P NWK EDV + V + A ++FP+G +++ +FR+T P Sbjct: 7 KELQIGAKLPNLIGQTQVGVVRVHDYMDGAWGVICTFPQTHHPVWMTELGMLQKLKDQFDARNCRVLALNIDSLKRQEAFLQDVNETQEVKLSFPVMADESGELSRALGLIPASAPKHAADLHRLPFSCTIVLDIDLTVRFLSYYPITVGRNLYEVLRALDAFQLATFNQIVTPTNWKISEDVFIEPDVKSDAAKKLFPQGFHEIKPYFRITASP 221
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: K3XAE5_GLOUD (Thioredoxin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAE5_GLOUD) HSP 1 Score: 197 bits (502), Expect = 7.530e-59 Identity = 89/215 (41.40%), Postives = 143/215 (66.51%), Query Frame = 3 Query: 108 RPLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAI--VPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQP 746 + LQIG ++PN ++ +G++ +H Y++ +WGV+ T+P+ + PV TELGM+ KL ++FD RNC+LLA+ +DS F++++ E QD ++ FP++AD +GEI LGL A A A + +P +++D+DL V+ ++ YP VG N+YE LRA+DA Q A FN+V P NWK EDV V +++ A ++FP+G +++S+FR+T P Sbjct: 7 KELQIGAKLPNIIGQTQVGVVGVHDYMDGAWGVLCTFPQTHHPVWMTELGMMQKLKDQFDARNCRLLALNIDSVKQQEQFLQDVNETQDVKVNFPVVADENGEISRTLGLVPASAPKHAADLHRLPFGCTIVLDVDLTVRFLSYYPICVGRNFYEVLRAVDAFQLAIFNQVVTPTNWKINEDVFVEPDITSDAAKKLFPQGFHEIKSYFRITASP 221
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A7S2FF11_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FF11_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.060e-58 Identity = 88/212 (41.51%), Postives = 141/212 (66.51%), Query Frame = 3 Query: 114 LQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAIVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPD 749 LQIGDE PN +C S G I LH I + W ++FT P++ + VT + L +SKL EEFD R +++A+GVD+ + HR +IKE +EL + ++TFPII D S +I LGL R + + ++++P +++D +L+++++ YP ++GHN+YE LRAID++Q + +++ PANW GEDV + + +A FP G +++RSWFR+T P+ Sbjct: 23 LQIGDEFPNLSCPSTSGFIELHDAIANKWTLLFTTPKDLNAVTTSALAEVSKLKEEFDARGVEIIALGVDTNMNHRDWIKETKELTEEKITFPIIVDDSAQISRALGLCRPNEPNIRRSLIPLMLAVVIDPELKIQLLQYYPVSIGHNFYEILRAIDSMQLSRVHKIATPANWMVGEDVFIVPDLGRYEAADEFPNGFLEIRSWFRLTGVPE 234
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A5D6Y293_9STRA (Thioredoxin domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y293_9STRA) HSP 1 Score: 195 bits (496), Expect = 5.820e-58 Identity = 89/218 (40.83%), Postives = 140/218 (64.22%), Query Frame = 3 Query: 99 TGGRPLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAI--VPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQP 746 T + LQIG ++PN ++ +G++ +H Y+ +WGV+ T+P+ + PV TELGML KL E+FD RNC+++A+ +DS F++++ E QD +L+FP++AD SGE+ LGL A A A + +P ++D+DL V+ + YP VG N YE LRA+DA Q A N+V P NWK +DV V ++++ A ++FP+G ++R +FR+T P Sbjct: 3 TAPKELQIGSKLPNLIGQTQVGVVRVHDYLEGAWGVLCTFPQTHHPVWATELGMLQKLKEQFDARNCRVVALNIDSLKRQEQFLRDVNETQDVKLSFPVLADESGELSRALGLVPASAPKHAADLHRLPFACTAVLDIDLTVRFLAYYPICVGRNLYEVLRALDAFQLAVLNQVVAPTNWKVNDDVFVEPELTSDAAKRLFPQGFHEIRPYFRITASP 220
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A2D4BJJ7_PYTIN (Thioredoxin domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJJ7_PYTIN) HSP 1 Score: 192 bits (488), Expect = 9.550e-57 Identity = 87/217 (40.09%), Postives = 142/217 (65.44%), Query Frame = 3 Query: 108 RPLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADA----IDPAKAIVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQP 746 + LQIG ++PN + +G++ +H Y++ +WGV+ T+P+ + PV TELGML KL ++FD RNC++L + +DS SF+ ++ E Q+ +++FP++ADA GE+ LGL A+A D + +P + +++D+DL V+ I+ YP +VG N+YE LRA+DA Q ATFN+V P NW+ EDV V + A ++FP+G +++ + R+T P Sbjct: 7 KELQIGAKLPNLIGHTQVGVVRVHDYMDGAWGVLATFPQTHHPVWATELGMLQKLKDQFDARNCRILGLHIDSLKRQESFLADVNETQEVKVSFPVVADADGELSRALGLIAANAPKHTADAHR--LPYSCTIVLDIDLTVRFISYYPLSVGRNWYEVLRAVDAFQLATFNQVVTPTNWRINEDVFVEPDLKTDAAKKLFPQGFHEIKPYLRITASP 221 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1180.1554.1 >prot_L-elsbetiae_contig1180.1554.1 ID=prot_L-elsbetiae_contig1180.1554.1|Name=mRNA_L-elsbetiae_contig1180.1554.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp MSDDYSQDSGSRLGDHVGTGGRPLQIGDEIPNFTCESHMGIITLHSYINSback to top mRNA from alignment at L-elsbetiae_contig1180:8516..11646+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1180.1554.1 ID=mRNA_L-elsbetiae_contig1180.1554.1|Name=mRNA_L-elsbetiae_contig1180.1554.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3131bp|location=Sequence derived from alignment at L-elsbetiae_contig1180:8516..11646+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1180:8516..11646+ >mRNA_L-elsbetiae_contig1180.1554.1 ID=mRNA_L-elsbetiae_contig1180.1554.1|Name=mRNA_L-elsbetiae_contig1180.1554.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig1180:8516..11646+ (Laminarionema elsbetiae ELsaHSoW15)back to top |