mRNA_L-elsbetiae_contig1180.1554.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1180.1554.1
Unique NamemRNA_L-elsbetiae_contig1180.1554.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: D8LEU8_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU8_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 3.060e-129
Identity = 182/211 (86.26%), Postives = 192/211 (91.00%), Query Frame = 3
Query:   45 MSDDYSQDSGSRLGDHVGTGGRPLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAIVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSAT 677
            MSD+ S DS S+L   VGTGGRPLQIGDEIPNFTCESHMG ITLHSYINS WGVIFTYPRNNDPV CTELGMLSKLSEEFDERNCKLLAIGVDSKIGHR+FIKE+QELQDCEL FPIIADASGEIFSLLGL R DA+DP K +VPQTSLL++DLDLRV+MI QYPCTVGHNYYE LRAIDALQQATFNRVG+PANWKEGEDVLVGA V  T
Sbjct:    1 MSDESSHDSSSKLNGLVGTGGRPLQIGDEIPNFTCESHMGSITLHSYINSGWGVIFTYPRNNDPVACTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRNFIKEVQELQDCELKFPIIADASGEIFSLLGLVREDAMDPTKGLVPQTSLLVIDLDLRVRMIVQYPCTVGHNYYEALRAIDALQQATFNRVGIPANWKEGEDVLVGANVILT 211          
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A6U1N900_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N900_9STRA)

HSP 1 Score: 238 bits (608), Expect = 5.430e-74
Identity = 110/233 (47.21%), Postives = 158/233 (67.81%), Query Frame = 3
Query:  111 PLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAI---DPAKA---------------IVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPDYD 755
            PLQIGDE PNF+C+S +G++T+H  +  +WG++ T+PR+ DPV  TEL M+SKLS+EF+ RN  +L I  DSK  HR +I+E QELQDC++T PI+AD +G++    GL R D +    P +                IV  + + +VD D R++MI  YP   G N+YE LRAIDA+Q +TF++V  PANW++GEDV +  K+++T A  M+PKG +++R+WFR+TPQPD D
Sbjct:   55 PLQIGDEAPNFSCDSTVGLVTMHELVAGNWGLLLTFPRDFDPVGTTELAMVSKLSDEFEARNIVVLGISPDSKTQHRMWIQETQELQDCDITIPILADETGDVLLTYGLVRPDGVLAGPPGEGEDGAVEGEEEGNLQHIVDCSGVFLVDPDKRLRMIQLYPACAGRNFYEILRAIDAIQLSTFHQVSTPANWRQGEDVFIPVKITSTTANSMYPKGFLEIRNWFRLTPQPDLD 287          
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A7S2W997_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W997_9STRA)

HSP 1 Score: 218 bits (554), Expect = 2.320e-66
Identity = 101/212 (47.64%), Postives = 145/212 (68.40%), Query Frame = 3
Query:  114 LQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAIVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPD 749
            LQIGDEIPNF  +S +G+   H  I+ S+ V+ T+  + DPV  TE+GMLSKL  +F  R+ KL+AI + SK  HR +I+EIQELQDC + FPI+AD  GE+  L  L +  A++  K + P T + ++D+D R++ +  YP T G N+YET+R++DALQ + F++V +PANW +GE+V V   +S+  A  MFPKG  +L +W+R TPQPD
Sbjct:   38 LQIGDEIPNFQADSTVGMFDFHDLIDGSFAVLVTFTGDMDPVGTTEIGMLSKLMMDFRARDAKLVAISIGSKENHRKWIEEIQELQDCRVWFPIVADTDGEVSRLFNLVKPKAVNAKKNLKPATLVTVIDIDRRIRQLQFYPKTTGRNFYETIRSLDALQLSLFHQVVVPANWMQGEEVYVHPGLSSVVASSMFPKGFNELNTWYRPTPQPD 249          
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: F0YNL2_AURAN (Thioredoxin domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNL2_AURAN)

HSP 1 Score: 210 bits (535), Expect = 1.790e-63
Identity = 95/217 (43.78%), Postives = 145/217 (66.82%), Query Frame = 3
Query:  114 LQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARAD----AIDPAKA-IVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPD 749
            LQ+GDEIP+F+ +S +G  T H  ++  W V+ T+P + + V  TE+G LSKL +EF+ RN +++ +  ++K  HR +I  +++++ C++ FP+I+DA  EI + LGL + D        AKA +VP T ++I D+D RV++  QYP T G N+YE LRA+D +Q + F++V  PANW +GEDV +G K+S   A   FPKG+V+ R W+R TPQPD
Sbjct:   33 LQVGDEIPDFSADSSVGKFTYHDMVDGVWSVLVTFPGDREAVATTEMGQLSKLRDEFEARNVRVMGVSCNTKYRHREWIAAVEDIEGCKVAFPLISDADAEISAKLGLVKHDWKKRNFPSAKAALVPATLVVICDIDKRVRLTMQYPTTTGRNFYEVLRAVDTVQLSLFHQVATPANWNQGEDVFIGPKLSRVAAQSAFPKGMVEQRPWYRTTPQPD 249          
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A7S2CC88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC88_9STRA)

HSP 1 Score: 202 bits (515), Expect = 9.470e-61
Identity = 91/212 (42.92%), Postives = 136/212 (64.15%), Query Frame = 3
Query:  114 LQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAIVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPD 749
            LQ+GD++PNF+CE+  G +TLH  I   W +IFT P+N DP++ + L  ++KL EEFD RN  +  +GVDSK+ H+ ++ +  ELQ+  + FPII D   +I    GL R +  D   A+VP    +++D DL+++ +  YP + GHNY E LR ID+LQ    + V  PANW  GED+ + A+VS  +A + F KG +++R+WFR+T  PD
Sbjct:   20 LQLGDDVPNFSCETTQGFVTLHDTIQGKWVMIFTMPKNLDPISVSALAAVAKLKEEFDARNVSVYGLGVDSKMNHKVWVSDTYELQEERVNFPIIVDDKAQISKAFGLVRPNETDFMHALVPCMLCVVIDPDLKMQYMAHYPMSTGHNYKEVLRVIDSLQLTREHPVCTPANWMVGEDIFIKAEVSLNEASERFVKGFLEIRNWFRLTAVPD 231          
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A8K1C4E0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4E0_PYTOL)

HSP 1 Score: 199 bits (507), Expect = 1.330e-59
Identity = 90/215 (41.86%), Postives = 145/215 (67.44%), Query Frame = 3
Query:  108 RPLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAI--VPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQP 746
            + LQIG ++PN   ++ +G++ +H Y++ +WGVI T+P+ + PV  TELGML KL ++FD RNC++LA+ +DS     +F++++ E Q+ +L+FP++AD SGE+   LGL  A A   A  +  +P +  +++D+DL V+ ++ YP TVG N YE LRA+DA Q ATFN++  P NWK  EDV +   V +  A ++FP+G  +++ +FR+T  P
Sbjct:    7 KELQIGAKLPNLIGQTQVGVVRVHDYMDGAWGVICTFPQTHHPVWMTELGMLQKLKDQFDARNCRVLALNIDSLKRQEAFLQDVNETQEVKLSFPVMADESGELSRALGLIPASAPKHAADLHRLPFSCTIVLDIDLTVRFLSYYPITVGRNLYEVLRALDAFQLATFNQIVTPTNWKISEDVFIEPDVKSDAAKKLFPQGFHEIKPYFRITASP 221          
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: K3XAE5_GLOUD (Thioredoxin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAE5_GLOUD)

HSP 1 Score: 197 bits (502), Expect = 7.530e-59
Identity = 89/215 (41.40%), Postives = 143/215 (66.51%), Query Frame = 3
Query:  108 RPLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAI--VPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQP 746
            + LQIG ++PN   ++ +G++ +H Y++ +WGV+ T+P+ + PV  TELGM+ KL ++FD RNC+LLA+ +DS      F++++ E QD ++ FP++AD +GEI   LGL  A A   A  +  +P    +++D+DL V+ ++ YP  VG N+YE LRA+DA Q A FN+V  P NWK  EDV V   +++  A ++FP+G  +++S+FR+T  P
Sbjct:    7 KELQIGAKLPNIIGQTQVGVVGVHDYMDGAWGVLCTFPQTHHPVWMTELGMMQKLKDQFDARNCRLLALNIDSVKQQEQFLQDVNETQDVKVNFPVVADENGEISRTLGLVPASAPKHAADLHRLPFGCTIVLDVDLTVRFLSYYPICVGRNFYEVLRAVDAFQLAIFNQVVTPTNWKINEDVFVEPDITSDAAKKLFPQGFHEIKSYFRITASP 221          
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A7S2FF11_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FF11_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.060e-58
Identity = 88/212 (41.51%), Postives = 141/212 (66.51%), Query Frame = 3
Query:  114 LQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAIVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPD 749
            LQIGDE PN +C S  G I LH  I + W ++FT P++ + VT + L  +SKL EEFD R  +++A+GVD+ + HR +IKE +EL + ++TFPII D S +I   LGL R +  +  ++++P    +++D +L+++++  YP ++GHN+YE LRAID++Q +  +++  PANW  GEDV +   +   +A   FP G +++RSWFR+T  P+
Sbjct:   23 LQIGDEFPNLSCPSTSGFIELHDAIANKWTLLFTTPKDLNAVTTSALAEVSKLKEEFDARGVEIIALGVDTNMNHRDWIKETKELTEEKITFPIIVDDSAQISRALGLCRPNEPNIRRSLIPLMLAVVIDPELKIQLLQYYPVSIGHNFYEILRAIDSMQLSRVHKIATPANWMVGEDVFIVPDLGRYEAADEFPNGFLEIRSWFRLTGVPE 234          
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A5D6Y293_9STRA (Thioredoxin domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y293_9STRA)

HSP 1 Score: 195 bits (496), Expect = 5.820e-58
Identity = 89/218 (40.83%), Postives = 140/218 (64.22%), Query Frame = 3
Query:   99 TGGRPLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAI--VPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQP 746
            T  + LQIG ++PN   ++ +G++ +H Y+  +WGV+ T+P+ + PV  TELGML KL E+FD RNC+++A+ +DS      F++++ E QD +L+FP++AD SGE+   LGL  A A   A  +  +P     ++D+DL V+ +  YP  VG N YE LRA+DA Q A  N+V  P NWK  +DV V  ++++  A ++FP+G  ++R +FR+T  P
Sbjct:    3 TAPKELQIGSKLPNLIGQTQVGVVRVHDYLEGAWGVLCTFPQTHHPVWATELGMLQKLKEQFDARNCRVVALNIDSLKRQEQFLRDVNETQDVKLSFPVLADESGELSRALGLVPASAPKHAADLHRLPFACTAVLDIDLTVRFLAYYPICVGRNLYEVLRALDAFQLAVLNQVVAPTNWKVNDDVFVEPELTSDAAKRLFPQGFHEIRPYFRITASP 220          
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Match: A0A2D4BJJ7_PYTIN (Thioredoxin domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJJ7_PYTIN)

HSP 1 Score: 192 bits (488), Expect = 9.550e-57
Identity = 87/217 (40.09%), Postives = 142/217 (65.44%), Query Frame = 3
Query:  108 RPLQIGDEIPNFTCESHMGIITLHSYINSSWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRSFIKEIQELQDCELTFPIIADASGEIFSLLGLARADA----IDPAKAIVPQTSLLIVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGEDVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQP 746
            + LQIG ++PN    + +G++ +H Y++ +WGV+ T+P+ + PV  TELGML KL ++FD RNC++L + +DS     SF+ ++ E Q+ +++FP++ADA GE+   LGL  A+A     D  +  +P +  +++D+DL V+ I+ YP +VG N+YE LRA+DA Q ATFN+V  P NW+  EDV V   +    A ++FP+G  +++ + R+T  P
Sbjct:    7 KELQIGAKLPNLIGHTQVGVVRVHDYMDGAWGVLATFPQTHHPVWATELGMLQKLKDQFDARNCRILGLHIDSLKRQESFLADVNETQEVKVSFPVVADADGELSRALGLIAANAPKHTADAHR--LPYSCTIVLDIDLTVRFISYYPLSVGRNWYEVLRAVDAFQLATFNQVVTPTNWRINEDVFVEPDLKTDAAKKLFPQGFHEIKPYLRITASP 221          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1180.1554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU8_ECTSI3.060e-12986.26Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A6U1N900_9STRA5.430e-7447.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2W997_9STRA2.320e-6647.64Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0YNL2_AURAN1.790e-6343.78Thioredoxin domain-containing protein n=1 Tax=Aure... [more]
A0A7S2CC88_9STRA9.470e-6142.92Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8K1C4E0_PYTOL1.330e-5941.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3XAE5_GLOUD7.530e-5941.40Thioredoxin domain-containing protein n=1 Tax=Glob... [more]
A0A7S2FF11_9STRA1.060e-5841.51Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A5D6Y293_9STRA5.820e-5840.83Thioredoxin domain-containing protein n=1 Tax=Pyth... [more]
A0A2D4BJJ7_PYTIN9.550e-5740.09Thioredoxin domain-containing protein n=1 Tax=Pyth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1180contigL-elsbetiae_contig1180:8516..11646 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score375.6
Seed ortholog evalue1.8e-101
Seed eggNOG ortholog2880.D8LEU8
KEGG rclassRC00034
KEGG koko:K11188
KEGG ReactionR00602,R02596,R03919,R04007,R07443
KEGG Pathwayko00940,ko01100,ko01110,map00940,map01100,map01110
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peroxiredoxin activity
EggNOG OGsCOG0450@1,KOG0854@2759
EC1.11.1.15,1.11.1.7
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size973
Cds size714
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1180.1554.1prot_L-elsbetiae_contig1180.1554.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1180 8560..11431 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815383.7679234-UTR-L-elsbetiae_contig1180:8515..85591622815383.7679234-UTR-L-elsbetiae_contig1180:8515..8559Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1180 8516..8559 +
1691682871.3611548-UTR-L-elsbetiae_contig1180:8515..85591691682871.3611548-UTR-L-elsbetiae_contig1180:8515..8559Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1180 8516..8559 +
1622815383.8555202-UTR-L-elsbetiae_contig1180:11431..116461622815383.8555202-UTR-L-elsbetiae_contig1180:11431..11646Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1180 11432..11646 +
1691682871.4333944-UTR-L-elsbetiae_contig1180:11431..116461691682871.4333944-UTR-L-elsbetiae_contig1180:11431..11646Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1180 11432..11646 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815383.7794566-CDS-L-elsbetiae_contig1180:8559..87291622815383.7794566-CDS-L-elsbetiae_contig1180:8559..8729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 8560..8729 +
1691682871.3744893-CDS-L-elsbetiae_contig1180:8559..87291691682871.3744893-CDS-L-elsbetiae_contig1180:8559..8729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 8560..8729 +
1622815383.792387-CDS-L-elsbetiae_contig1180:9428..95761622815383.792387-CDS-L-elsbetiae_contig1180:9428..9576Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 9429..9576 +
1691682871.3837636-CDS-L-elsbetiae_contig1180:9428..95761691682871.3837636-CDS-L-elsbetiae_contig1180:9428..9576Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 9429..9576 +
1622815383.8051076-CDS-L-elsbetiae_contig1180:10067..101871622815383.8051076-CDS-L-elsbetiae_contig1180:10067..10187Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 10068..10187 +
1691682871.3934753-CDS-L-elsbetiae_contig1180:10067..101871691682871.3934753-CDS-L-elsbetiae_contig1180:10067..10187Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 10068..10187 +
1622815383.8198538-CDS-L-elsbetiae_contig1180:10642..107261622815383.8198538-CDS-L-elsbetiae_contig1180:10642..10726Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 10643..10726 +
1691682871.4050553-CDS-L-elsbetiae_contig1180:10642..107261691682871.4050553-CDS-L-elsbetiae_contig1180:10642..10726Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 10643..10726 +
1622815383.8292089-CDS-L-elsbetiae_contig1180:10999..110981622815383.8292089-CDS-L-elsbetiae_contig1180:10999..11098Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 11000..11098 +
1691682871.416739-CDS-L-elsbetiae_contig1180:10999..110981691682871.416739-CDS-L-elsbetiae_contig1180:10999..11098Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 11000..11098 +
1622815383.8424206-CDS-L-elsbetiae_contig1180:11338..114311622815383.8424206-CDS-L-elsbetiae_contig1180:11338..11431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 11339..11431 +
1691682871.4249542-CDS-L-elsbetiae_contig1180:11338..114311691682871.4249542-CDS-L-elsbetiae_contig1180:11338..11431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1180 11339..11431 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1180.1554.1

>prot_L-elsbetiae_contig1180.1554.1 ID=prot_L-elsbetiae_contig1180.1554.1|Name=mRNA_L-elsbetiae_contig1180.1554.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
MSDDYSQDSGSRLGDHVGTGGRPLQIGDEIPNFTCESHMGIITLHSYINS
SWGVIFTYPRNNDPVTCTELGMLSKLSEEFDERNCKLLAIGVDSKIGHRS
FIKEIQELQDCELTFPIIADASGEIFSLLGLARADAIDPAKAIVPQTSLL
IVDLDLRVKMITQYPCTVGHNYYETLRAIDALQQATFNRVGMPANWKEGE
DVLVGAKVSATDAGQMFPKGLVQLRSWFRVTPQPDYD*
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mRNA from alignment at L-elsbetiae_contig1180:8516..11646+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1180.1554.1 ID=mRNA_L-elsbetiae_contig1180.1554.1|Name=mRNA_L-elsbetiae_contig1180.1554.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3131bp|location=Sequence derived from alignment at L-elsbetiae_contig1180:8516..11646+ (Laminarionema elsbetiae ELsaHSoW15)
CTCCCTCTTTCTCCTCTCGTCTCGCGGTGATTACTGTCACTGCGATGTCG GATGACTACAGCCAGGATAGCGGCAGCAGACTTGGTGACCATGTGGGCAC CGGGGGGAGGCCGCTTCAGATCGGAGATGAGATTCCGAACTTCACGTGCG AATCCCACATGGGAATCATCACACTCCACTCGTACATCAACAGCAGCTGG GGTGTGATATTCACGTGAGACGCGTGCATGTAGATATTGCCATAAAAAAG GATCTCACTTGAGGAGCTTACCCTGTCAGTTGCTATTTAGAGAGAGAGAG GATTCGGTCTCAACTTTGTAGCAAAACCCCATATCCTCACGTGAGAGCCT GATGTTCACGATGCGCACCTTGGCGGCACATGGCCCTGGGTGTACAGAGA GTAAAGTGAGTGCTTCATCTAGACATACGAAAGCACTATAGTACACGTTT GTTCGAGAAAGGGTCCCAGGCCAGAGGCTTTGCCCGGTTTTTTTAAACCC CCTCGGGTACGCCGGCTGCACCCTCAGGTGGCGTGGGGTCTATCTAGATA ATAGATAGTCTATTTTCTGATGGTGTTGCCAACTAGCGGCCAGCTGCCGT GATGTCTCCGTGCTGGGTTCACTTGCCCGTTTCCGTCAATATAGGCAACC TTCAATTACGCCGTATTCCATGACATAAGTACTGTGAGAGCACGGATAAA AATGATATTTTGCTCAACATCGCCAGTCGCTCGCACCAGCTTTTCTGTTT GGCGTACACAAACACACATACGAGGATGATCAGTACCGTCAACGTAGCAA TCCCTCCCTGGGATACGCATATTTTTCAGAAAACGTACCTCACAAAAACG TTACCTCCGCTGGGTTTCTTGTTCAAAGCGTTGTTTGACCGGCGAATTCT TGAACTATCATAGATACCCGAGAAATAACGACCCGGTCACCTGCACGGAA CTCGGCATGCTGAGCAAACTGTCGGAGGAGTTCGACGAGAGAAATTGCAA GCTGCTCGCCATCGGGGTCGACTCGAAAATCGGGCATCGAAGCTTCATCA AGGAGATCCAGGTATGTACGCTTGGCTAATTAAGCAGCGTTAGCAAGACA AAATAACTGCCCCAGGTTTCCCTCCAACATCAAGGTGTAGATATCATGAA GCTATCACCGAAGTATCTACAGTACCGCGTATTGTAGTGAACACGCCAGG GTCCATTCCGCGTAACTCGAGGGTTAGAAGAGTTTGGGCAGCGTTTCACC TTTCTTTGTCGAATGTCTCATGCTCGCAGCTTCTCTTACTTCGAGTTGCA GAGTAACAGGCACTTTACCCAAACTCACCACAAGTTCTCGGCCCGTTGTC TATACCTTGAGGGCGCGCGTGGACAACGGCCGGAAGTTCAATTTTGAGCA AGCCCGTCATTTGAGCATATCACGGCATGTTGAACTGGTGGTGCAACACT TTCTTGACCACCGGATATTAACGTGGTCCTCTGGCTACTTACTGTGCACG GTACTTTTGCAACAATCGTGCCCACACGGCAACCTGCCCCTCCTCACGAC AGGAGCTGCAAGACTGCGAGCTAACGTTCCCCATTATAGCCGACGCCAGC GGCGAGATTTTCTCCCTGTTGGGATTGGCGAGGGCGGACGCAATCGATCC AGCTAAAGCCATCGTGCCTCAGGTATGGACGTTTACCATCCGTCGTTGCC CAACTCTCGGGGGTTTAATCAAGGTTGGTGTTGGCGAGGTTTCAGTCGTT GCCCAACTCTTCGGGGGGTTATTTAAGGTTGGTGTTGTCGAGGTTTCAGT ATTGGCAAGCGTTTTCTTTGGAACTCACGAACGCACATAGTTCGTGTAGG TCATGGTTTCAATCGCCTGGCCATGATGAAGAATGGTCTTGGATTTATCT ACTCAGCCGTTTTCCAGCAAAGCAAACACTGTCCATCTTGATACATCACA CTAGCCGGGCATTTACGCCCCTGGCGCCCGTTTTCTGCGCTCCTCTAGGT AACACGCAAGAAAGATTCACCGTTGCTAATCTAAAGGATTGCCGCGCACG CTGCCTATCGCCCTATTTTCTCACGTTGGTGCTGATCCCTCTTGCAATCG CGATCACTCTCCGCGTTTCGAGGGTAGACGTCTCTGCTAATAGTGGACTT GGACTTGCGCGTGAAGATGATAACACAGTATCCATGCACCGTCGGGCACA ACTACTACGAGGTGAGGGGCTGAACAATTAGAACGCCCTGGCTGCGTCGC CGTTGGAATCGAACCATCAGTGCCGGCTCTCGCGACCTATGAAACAAAAC ACGCACAGACCCACATAATATGTATCGATTCTTACCAAACCTAACACGAG GCAGAGCGTATCGAGGCCCCACGTAGACTGCCTGGTTTTGAAAATCTTTG AAATAACCGCCTCGTTGGGCGTCCTGTTTTTCAGAGCCACCTTTCCCAGA CGCGAACCTGCCCAAATTTTGTGTTCCAACGCAGACCTTGAGGGCAATCG ACGCGCTGCAACAGGCGACGTTCAACCGAGTCGGTATGCCAGCCAACTGG AAAGAAGGGGAAGATGTCCTCGTCGGTGCAAAAGTGAGTATCTATTCATG CATATGCCTCTCTCTTGTTTCGACTATTTACGAGGGACCTCCAATCTATG AGAACGACATACCCGCAAAGTATCGGCGCGGTATATCGTACGGCTTCCGC TGACTGCGCGAATGCACACGAGAAGGGGGGGTTTCAGGGCGCCTTGGGTG ATAATATGAACGCCCAACCAAAATCACCAGTGTATTTCGCGTGTGCAACC ATGTGCCGCCGCCGCGGGAACAGGTATCCGCGACGGACGCGGGACAGATG TTCCCGAAGGGACTAGTGCAGCTGCGATCATGGTTCAGGGTGACCCCTCA ACCAGACTACGACTGACTCAGGCGCTTCAAGGTTAGGTGGCACCTACCCT ACGCGTTGACTGCAGGGATGGCAGCCCTGGGGGTGAAATAAAGAGAGTTC ATCGCCTAGCAGCTCTAGGCAGACTCCGGCATCAGCTTTTTTTGAGACTG CACGATGACCACTGGACTACCAGCAAGCTGACACCACAACATCTAACCGG TACCACATTGTTACCACAAATGTAACGGAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1180:8516..11646+

>mRNA_L-elsbetiae_contig1180.1554.1 ID=mRNA_L-elsbetiae_contig1180.1554.1|Name=mRNA_L-elsbetiae_contig1180.1554.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig1180:8516..11646+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGGATGACTACAGCCAGGATAGCGGCAGCAGACTTGGTGACCATGT
GGGCACCGGGGGGAGGCCGCTTCAGATCGGAGATGAGATTCCGAACTTCA
CGTGCGAATCCCACATGGGAATCATCACACTCCACTCGTACATCAACAGC
AGCTGGGGTGTGATATTCACATGTCGGATGACTACAGCCAGGATAGCGGC
AGCAGACTTGGTGACCATGTGGGCACCGGGGGGAGGCCGCTTCAGATCGG
AGATGAGATTCCGAACTTCACGTGCGAATCCCACATGGGAATCATCACAC
TCCACTCGTACATCAACAGCAGCTGGGGTGTGATATTCACATACCCGAGA
AATAACGACCCGGTCACCTGCACGGAACTCGGCATGCTGAGCAAACTGTC
GGAGGAGTTCGACGAGAGAAATTGCAAGCTGCTCGCCATCGGGGTCGACT
CGAAAATCGGGCATCGAAGCTTCATCAAGGAGATCCAGATACCCGAGAAA
TAACGACCCGGTCACCTGCACGGAACTCGGCATGCTGAGCAAACTGTCGG
AGGAGTTCGACGAGAGAAATTGCAAGCTGCTCGCCATCGGGGTCGACTCG
AAAATCGGGCATCGAAGCTTCATCAAGGAGATCCAGGAGCTGCAAGACTG
CGAGCTAACGTTCCCCATTATAGCCGACGCCAGCGGCGAGATTTTCTCCC
TGTTGGGATTGGCGAGGGCGGACGCAATCGATCCAGCTAAAGCCATCGTG
CCTCAGGAGCTGCAAGACTGCGAGCTAACGTTCCCCATTATAGCCGACGC
CAGCGGCGAGATTTTCTCCCTGTTGGGATTGGCGAGGGCGGACGCAATCG
ATCCAGCTAAAGCCATCGTGCCTCAGACGTCTCTGCTAATAGTGGACTTG
GACTTGCGCGTGAAGATGATAACACAGTATCCATGCACCGTCGGGCACAA
CTACTACGAGACGTCTCTGCTAATAGTGGACTTGGACTTGCGCGTGAAGA
TGATAACACAGTATCCATGCACCGTCGGGCACAACTACTACGAGACCTTG
AGGGCAATCGACGCGCTGCAACAGGCGACGTTCAACCGAGTCGGTATGCC
AGCCAACTGGAAAGAAGGGGAAGATGTCCTCGTCGGTGCAAAAACCTTGA
GGGCAATCGACGCGCTGCAACAGGCGACGTTCAACCGAGTCGGTATGCCA
GCCAACTGGAAAGAAGGGGAAGATGTCCTCGTCGGTGCAAAAGTATCCGC
GACGGACGCGGGACAGATGTTCCCGAAGGGACTAGTGCAGCTGCGATCAT
GGTTCAGGGTGACCCCTCAACCAGACTACGACTGAGTATCCGCGACGGAC
GCGGGACAGATGTTCCCGAAGGGACTAGTGCAGCTGCGATCATGGTTCAG
GGTGACCCCTCAACCAGACTACGACTGA
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