mRNA_L-elsbetiae_contig11797.1546.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Match: D7FZN1_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN1_ECTSI) HSP 1 Score: 431 bits (1107), Expect = 8.100e-144 Identity = 228/268 (85.07%), Postives = 240/268 (89.55%), Query Frame = 1 Query: 1 QEGVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALNAAGVPCAKLDSTLEAHEVFEIYEQIRAGSVALLYVSPERFNNERFVNTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAAKANARLALTATATPKVTVDIANRLDIPSSNVRRTPFYRPMLSLGAVRAPEDPAERTQMLVGMLLAXXXXXXXXXXXXGLAAGAAVVYVTLQRTAVEVAQALVAAGIDARPYHAGLPALERE 804 +E VVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDAL AAGVPCAKLDSTLEAHEV++IYEQIRAGSVALLYVSPERFNNERFV TLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAA+ANARLALTATATPKV VDIANRLDIP SNV RTPFYRPML+LGAVRAP+D ER ++L +LL G +GAAVVYVTLQ+TAVEVAQAL AAGIDARPYHAGLP L+RE Sbjct: 88 EEEVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALIAAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVRTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAARANARLALTATATPKVAVDIANRLDIPPSNVNRTPFYRPMLTLGAVRAPDDQEERARLLADILLRGEHHQQGRGTAAG--SGAAVVYVTLQKTAVEVAQALAAAGIDARPYHAGLPPLQRE 353
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Match: A0A6H5JUW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW0_9PHAE) HSP 1 Score: 357 bits (915), Expect = 5.770e-115 Identity = 206/327 (63.00%), Postives = 220/327 (67.28%), Query Frame = 1 Query: 52 FPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQT-------------------------------------------DALNAAGVPCAKLDSTLEAHEVFEIYEQIRAGSVALLYVSPERFNNERFVNTLKGIKVALFVVDEAHCISE---------------------------------WGHNFRPDYLRLADFAKAAKANARLALTATATPKVTVDIANRLDIPSSNVRRTPFYRPMLSLGAVRAPEDPAERTQMLVGMLLAXXXXXXXXXXXXGLAAGAAVVYVTLQRTAVEVAQALVAAGIDARPYHAGLPALERE 804 FPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQ D L AGVPCAKLDSTLEAHEV++IYEQIRAGSVALLYVSPERFNNERFV TL+G+KVALFVVDEAHCISE WGHNFRPDYLRLADFAKAA+ANARLALTA ATP+V VDIANRLDIP SNV RTPFYRPML+LGAVRAP+D ER ++L +LL G +GAAVVYVTLQ+TAVEVAQAL AAGIDARPYHAGLP L+RE Sbjct: 39 FPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQVWYMLLNHNLFSLLSARQDIALCRGQLTVLVLLWMGLGTIAGVKDKLGPAGVPCAKLDSTLEAHEVYDIYEQIRAGSVALLYVSPERFNNERFVRTLQGVKVALFVVDEAHCISEGRVCCGAQRQMPLPVEAKRTSTEPVLHLLVSPQWGHNFRPDYLRLADFAKAARANARLALTAAATPQVAVDIANRLDIPPSNVNRTPFYRPMLTLGAVRAPDDQEERARLLADILLRGEHQQQGSGTAAG--SGAAVVYVTLQKTAVEVAQALAAAGIDARPYHAGLPPLQRE 363
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Match: A0A835Z8G9_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G9_9STRA) HSP 1 Score: 262 bits (669), Expect = 2.880e-78 Identity = 157/304 (51.64%), Postives = 182/304 (59.87%), Query Frame = 1 Query: 1 QEGVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALNAAGVPCAKLDSTLEAHEVFEIYEQIRAGSVALLYVSPERFNNERFVNTLKGI------------------------------------KVALFVVDEAHCISEWGHNFRPDYLRLADFAKAAKANARLALTATATPKVTVDIANRLDIPSSNVRRTPFYRPMLSLGAVRAPEDPAERTQMLVGMLLAXXXXXXXXXXXXGLAAGAAVVYVTLQRTAVEVAQALVAAGIDARPYHAGLPALERE 804 QE VV LL S A + PTGAGKS+CYQLPG ++AR G G T+VVSPLIALMKDQ AL A G+PCA+LDS+L+A + Y+ +R G LLYVSPERFNNERF + KG +VALFVVDEAHCISEWGHNFRPDYLRLA FA+AA A A LALTATATP+V D+ RL I +V RTP +R L+L A RAP+ ER L L A A GA +VY LQ+TA + A L AAGI AR YHAGL A ER+ Sbjct: 68 QEEVVRLLLQQRSAAAILPTGAGKSLCYQLPGLVLARAGRGTTVVVSPLIALMKDQAQALAARGLPCARLDSSLDAAVARDAYDMVRRGRAGLLYVSPERFNNERFASAFKGALVHFARWAQLRTVERRGAAARARISSEAGLGALSKARVALFVVDEAHCISEWGHNFRPDYLRLAAFARAAGAAATLALTATATPRVAADMCARLAIAQHDVVRTPLHRAELALRAARAPDALEERVAALAARLRAR-------------APGATIVYAMLQQTATDAAAMLTAAGIPARAYHAGLRAAERD 358
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Match: UPI000AB9CF76 (RecQ family ATP-dependent DNA helicase n=3 Tax=Candidatus Thiosymbion oneisti TaxID=589554 RepID=UPI000AB9CF76) HSP 1 Score: 254 bits (649), Expect = 8.860e-77 Identity = 147/262 (56.11%), Postives = 174/262 (66.41%), Query Frame = 1 Query: 1 QEGVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALNAAGVPCAKLDSTLEAHEVFEIYEQIRAGSVALLYVSPERFNNERFVNTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAAKANARLALTATATPKVTVDIANRLDIPSSNVRRTPFYRPMLSLGAVRAPEDPAERTQMLVGMLLAXXXXXXXXXXXXGLAAGAAVVYVTLQRTAVEVAQALVAAGIDARPYHAGL 786 QE VVA L+AG S A VFPTG GKS+CYQLP L+ GLTLVVSPLIALMKDQ DAL G+ A+LDSTL+A + EQ+R G++ LLYV+PERFNNERF + ++++LF VDEAHCISEWGHNFRPDYL+LA FA+A A LALTATAT +V DI + L I + RT FYRP LSL P AER L+ L A G +VYVTLQRTA E+A+ LVAAG +AR YHAG+ Sbjct: 22 QEAVVAHLMAGHSAAAVFPTGGGKSLCYQLPALLLP----GLTLVVSPLIALMKDQIDALTRRGIAAARLDSTLDAAAHRTVMEQVRKGTLRLLYVAPERFNNERFREAITPVRISLFAVDEAHCISEWGHNFRPDYLKLAGFARACGAERVLALTATATERVLADICDGLAIDAERAVRTGFYRPNLSL--TMTPVSAAERDGSLLTALRANPP-------------GPTIVYVTLQRTAEELAERLVAAGCEARAYHAGM 264
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Match: U2EN26_9GAMM (ATP-dependent DNA helicase RecQ protein n=2 Tax=Salinisphaera TaxID=180541 RepID=U2EN26_9GAMM) HSP 1 Score: 246 bits (627), Expect = 1.240e-73 Identity = 144/267 (53.93%), Postives = 176/267 (65.92%), Query Frame = 1 Query: 1 QEGVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALNAAGVPCAKLDSTLEAHEVFEIYEQIRAGSVALLYVSPERFNNERFVNTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAAKANARLALTATATPKVTVDIANRLDIPSSNVRRTPFYRPMLSLGAVRAPEDPAERTQMLVGMLLAXXXXXXXXXXXXGLAAGAAVVYVTLQRTAVEVAQALVAAGIDARPYHAGLPALER 801 Q V+ LLAG S A VFPTG GKS+CYQLP + G+TLVVSPLIALMKDQ DAL+A G+ +LDS+L+A + +++R+G + LLYV+PERFNNERF TL ++V+LF VDEAHCISEWGHNFRPDYL+L FAKAAKA LALTATATP V DI LDI + RT FYRP L+L + AP +R L+ L +AG +VYVTLQRTA +VA+ L AG AR YHAG+ + +R Sbjct: 22 QREVIEHLLAGRSAAAVFPTGGGKSLCYQLPALALP----GITLVVSPLIALMKDQIDALSARGIAAQRLDSSLDAEGYRAVMDRLRSGELRLLYVAPERFNNERFRQTLSQLRVSLFAVDEAHCISEWGHNFRPDYLKLVGFAKAAKAERLLALTATATPAVLDDICQVLDIGADCAVRTAFYRPNLTL--LFAPTTVEQRDHDLLARL-------------NERSAGPTIVYVTLQRTAEQVAKQLADAGHPARAYHAGMDSEKR 269
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Match: A0A450TLC6_9GAMM (ATP-dependent DNA helicase, RecQ-like (Fragment) n=2 Tax=Candidatus Kentron sp. DK TaxID=2126562 RepID=A0A450TLC6_9GAMM) HSP 1 Score: 246 bits (627), Expect = 2.570e-73 Identity = 141/262 (53.82%), Postives = 172/262 (65.65%), Query Frame = 1 Query: 1 QEGVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALNAAGVPCAKLDSTLEAHEVFEIYEQIRAGSVALLYVSPERFNNERFVNTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAAKANARLALTATATPKVTVDIANRLDIPSSNVRRTPFYRPMLSLGAVRAPEDPAERTQMLVGMLLAXXXXXXXXXXXXGLAAGAAVVYVTLQRTAVEVAQALVAAGIDARPYHAGL 786 QE V+ LL GES A VFPTG GKS+CYQLP L+ G+TLVVSPLIALMKDQ DAL A G+ +LDS+L E ++ Q+R G++ LLYV+PERFNNERF +L+ +++ALF VDEAHCISEWGHNFRPDYL+LA FA+ A LALTATATP V DI DI RT FYRP L+L + + ER ++L+ + G A+VYVTLQ+TA EVA+ L AAG+ AR YHAGL Sbjct: 50 QEAVIRHLLDGESAAAVFPTGGGKSLCYQLPALLLP----GVTLVVSPLIALMKDQIDALTARGIHARRLDSSLTGEEYRDVMVQLRGGTLPLLYVAPERFNNERFRESLRNVRIALFAVDEAHCISEWGHNFRPDYLKLAGFAREFGAERILALTATATPPVLDDICRLFDIKPHCAIRTGFYRPNLTLDTLAV--NAGERDEILLESIREQPK-------------GPAIVYVTLQKTAEEVAKRLAAAGLPARAYHAGL 292
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Match: A0A7W0STA9_9ACTN (ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0STA9_9ACTN) HSP 1 Score: 241 bits (615), Expect = 2.650e-73 Identity = 138/267 (51.69%), Postives = 176/267 (65.92%), Query Frame = 1 Query: 1 QEGVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALNAAGVPCAKLDSTLEAHEVFEIYEQIRAGSVALLYVSPERFNNERFVNTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAAKANARLALTATATPKVTVDIANRLDIPSSNVRRTPFYRPMLSLGAVRAPEDPAERTQMLVGMLLAXXXXXXXXXXXXGLAAGAAVVYVTLQRTAVEVAQALVAAGIDARPYHAGLPALER 801 QE V+ LLAG S VFPTGAGKS+CYQLP ++ G+T+VVSPLIALMKDQ D L +G+ +LDS+L A E +I+E++ AG++ LLYV+PERFNNERF+ L +++LF VDEAHCISEWGHNFRPDYL+LA+ A+ +A LALTATATP V DI + I + T FYRP L+L + P ER ++LV L G+ +VYVTLQRT++ VA+ LV AG+ ARPYHAG+ ER Sbjct: 28 QERVIEALLAGRSALAVFPTGAGKSLCYQLPALVLE----GVTIVVSPLIALMKDQIDFLQRSGIEAERLDSSLGAAEQRQIFERLHAGALELLYVAPERFNNERFLAQLARTRISLFAVDEAHCISEWGHNFRPDYLKLAERARDLRAERVLALTATATPAVVADIRSGFGIEEEDAVVTGFYRPNLTL--LMTPVASGERDRLLVERLRERPP-------------GSTIVYVTLQRTSLRVAELLVGAGLPARPYHAGIGTEER 275
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Match: A0A3D2Z062_9BACT (RecQ family ATP-dependent DNA helicase n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A3D2Z062_9BACT) HSP 1 Score: 243 bits (619), Expect = 1.790e-72 Identity = 142/267 (53.18%), Postives = 173/267 (64.79%), Query Frame = 1 Query: 1 QEGVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALNAAGVPCAKLDSTLEAHEVFEIYEQIRAGSVALLYVSPERFNNERFVNTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAAKANARLALTATATPKVTVDIANRLDIPSSNVRRTPFYRPMLSLGAVRAPEDPAERTQMLVGMLLAXXXXXXXXXXXXGLAAGAAVVYVTLQRTAVEVAQALVAAGIDARPYHAGLPALER 801 Q VV +LLAG S A VFPTG GKS+CYQLP ++ GLTLVVSPLIALMKDQ DAL G+ A+LDS+L+ + + + IR+G + LLYV+PERFNNERF ++GI ++LF VDEAHCISEWGHNFRPDYL+LA FA+ +A LALTATATP+V DI DI + RT FYRP L L + P AER L+ +L G +VYVTLQRTA +VAQ L +G+ AR YHAG+ ER Sbjct: 22 QADVVERLLAGHSTAAVFPTGGGKSLCYQLPSLMLP----GLTLVVSPLIALMKDQIDALQRRGITAARLDSSLDKDQYRSVMDGIRSGQLRLLYVAPERFNNERFRQAIEGIAISLFAVDEAHCISEWGHNFRPDYLKLAGFARQFQAERILALTATATPRVLDDICAGFDIHPEHAVRTGFYRPNLLLRST--PVRVAERDGALLDVLQQQPP-------------GPTIVYVTLQRTAEQVAQRLEQSGLSARAYHAGMKDEER 269
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Match: A0A517Y9U5_9BACT (ATP-dependent DNA helicase RecQ n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517Y9U5_9BACT) HSP 1 Score: 242 bits (618), Expect = 2.180e-72 Identity = 142/269 (52.79%), Postives = 174/269 (64.68%), Query Frame = 1 Query: 1 QEGVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALNAAGVPCAKLDSTLEAHEVFEIYEQIRAGSVALLYVSPERFNNERFVNTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAAKANARLALTATATPKVTVDIANRLDIPSSNVRRTPFYRPMLSLGA--VRAPEDPAERTQMLVGMLLAXXXXXXXXXXXXGLAAGAAVVYVTLQRTAVEVAQALVAAGIDARPYHAGLPALER 801 Q V+ +LLAG S A VFPTG GKS+CYQLP L+ GLTLVVSPLIALMKDQ DAL+ G+ A++DSTL A E + ++IR+G + LLYV+PERFNNERF ++ + V+LF VDEAHCISEWGHNFRPDYL+L FA +A LALTATATP+V DI I RT F+RP L+L A V +P R +L+ L A GA++VYVTLQ+TA +VA+ L AAG A+ YHAGL ER Sbjct: 20 QHAVIEQLLAGNSAAAVFPTGGGKSLCYQLPALLLP----GLTLVVSPLIALMKDQIDALDRRGIAAARIDSTLAAGETAAVMQRIRSGEIKLLYVAPERFNNERFREAIERMHVSLFAVDEAHCISEWGHNFRPDYLKLVRFANRCRAERLLALTATATPEVLRDICREFKIEPQAAIRTGFFRPNLALQASTVSSPN----RDALLIEKLHARPP-------------GASIVYVTLQKTAEQVAERLAAAGFAAKAYHAGLETEER 267
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Match: A0A2S9Y7M8_9DELT (ATP-dependent DNA helicase RecQ n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9Y7M8_9DELT) HSP 1 Score: 241 bits (614), Expect = 1.050e-71 Identity = 145/267 (54.31%), Postives = 168/267 (62.92%), Query Frame = 1 Query: 1 QEGVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIALMKDQTDALNAAGVPCAKLDSTLEAHEVFEIYEQIRAGSVALLYVSPERFNNERFVNTLKGIKVALFVVDEAHCISEWGHNFRPDYLRLADFAKAAKANARLALTATATPKVTVDIANRLDIPSSNVRRTPFYRPMLSLGAVRAPEDPAERTQMLVGMLLAXXXXXXXXXXXXGLAAGAAVVYVTLQRTAVEVAQALVAAGIDARPYHAGLPALER 801 Q V+ LLAG S A VF TGAGKS+CYQLP TL+ GLTLVVSPLIALMKDQ AL+A G+ LD TL + +++R G+ LLYV+PERFNNERF TL+ ++V+LF VDEAHCISEWGHNFRPDYL+LA FA+ A LALTATAT V DI L+I RTPFYR L+L V P ER LV G A+VYVTLQRTA EVA+ L AGIDA+PYHAG+ A R Sbjct: 24 QREVIEHLLAGRSSAAVFATGAGKSLCYQLPATLLP----GLTLVVSPLIALMKDQIGALSARGIVAHNLDFTLSFDAYKAVMDEVRDGTARLLYVAPERFNNERFRQTLQDVRVSLFAVDEAHCISEWGHNFRPDYLKLAMFARDLGAERILALTATATEPVLDDICRSLNIERGCAVRTPFYRANLTL--VTTPVSAVERDAALVARFRDRPR-------------GPAIVYVTLQRTAEEVAETLARAGIDAKPYHAGMAAEAR 271 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11797.1546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11797.1546.1 >prot_L-elsbetiae_contig11797.1546.1 ID=prot_L-elsbetiae_contig11797.1546.1|Name=mRNA_L-elsbetiae_contig11797.1546.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=268bp QEGVVAKLLAGESCAGVFPTGAGKSICYQLPGTLMARQGLGLTLVVSPLIback to top mRNA from alignment at L-elsbetiae_contig11797:220..2655- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11797.1546.1 ID=mRNA_L-elsbetiae_contig11797.1546.1|Name=mRNA_L-elsbetiae_contig11797.1546.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2436bp|location=Sequence derived from alignment at L-elsbetiae_contig11797:220..2655- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11797:220..2655- >mRNA_L-elsbetiae_contig11797.1546.1 ID=mRNA_L-elsbetiae_contig11797.1546.1|Name=mRNA_L-elsbetiae_contig11797.1546.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1608bp|location=Sequence derived from alignment at L-elsbetiae_contig11797:220..2655- (Laminarionema elsbetiae ELsaHSoW15)back to top |