mRNA_L-elsbetiae_contig1145.1270.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1145.1270.1 vs. uniprot
Match: A0A6H5K9E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E5_9PHAE) HSP 1 Score: 124 bits (311), Expect = 4.530e-31 Identity = 65/79 (82.28%), Postives = 71/79 (89.87%), Query Frame = 1 Query: 40 HAAGGTTEIGLALYTGGRLELGLNFDSCTVVALPGRIVSIIDVVLACLMGPPAAREAQELNALEDEVEMEEAEEATGGV 276 HAAGGTT+ LAL+ GGRLE GL+F SCTVVALPGRI++IIDVVLACLMGPPAAREAQELNALE+EVE EE EATGGV Sbjct: 881 HAAGGTTKATLALFVGGRLEAGLDFQSCTVVALPGRIMAIIDVVLACLMGPPAAREAQELNALEEEVEAEEXXEATGGV 959
BLAST of mRNA_L-elsbetiae_contig1145.1270.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI) HSP 1 Score: 124 bits (311), Expect = 4.580e-31 Identity = 65/79 (82.28%), Postives = 71/79 (89.87%), Query Frame = 1 Query: 40 HAAGGTTEIGLALYTGGRLELGLNFDSCTVVALPGRIVSIIDVVLACLMGPPAAREAQELNALEDEVEMEEAEEATGGV 276 HAAGGTT+ LAL+ GGRLE GL+F SCTVVALPGRI++IIDVVLACLMGPPAAREAQELNALE+EVE EE EATGGV Sbjct: 850 HAAGGTTKATLALFVGGRLEAGLDFQSCTVVALPGRIMAIIDVVLACLMGPPAAREAQELNALEEEVEAEEXXEATGGV 928 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1145.1270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1145.1270.1 >prot_L-elsbetiae_contig1145.1270.1 ID=prot_L-elsbetiae_contig1145.1270.1|Name=mRNA_L-elsbetiae_contig1145.1270.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp AAGAGGGGGDDASHAAGGTTEIGLALYTGGRLELGLNFDSCTVVALPGRIback to top mRNA from alignment at L-elsbetiae_contig1145:9967..10244+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1145.1270.1 ID=mRNA_L-elsbetiae_contig1145.1270.1|Name=mRNA_L-elsbetiae_contig1145.1270.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=278bp|location=Sequence derived from alignment at L-elsbetiae_contig1145:9967..10244+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1145:9967..10244+ >mRNA_L-elsbetiae_contig1145.1270.1 ID=mRNA_L-elsbetiae_contig1145.1270.1|Name=mRNA_L-elsbetiae_contig1145.1270.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=552bp|location=Sequence derived from alignment at L-elsbetiae_contig1145:9967..10244+ (Laminarionema elsbetiae ELsaHSoW15)back to top |