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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1347 |
| Cds size | 1065 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815350.628742-UTR-L-elsbetiae_contig11437:3188..3271 | 1622815350.628742-UTR-L-elsbetiae_contig11437:3188..3271 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11437 3189..3271 + |
| 1691682855.0143237-UTR-L-elsbetiae_contig11437:3188..3271 | 1691682855.0143237-UTR-L-elsbetiae_contig11437:3188..3271 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11437 3189..3271 + |
| 1622815350.6744163-UTR-L-elsbetiae_contig11437:4852..5051 | 1622815350.6744163-UTR-L-elsbetiae_contig11437:4852..5051 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11437 4853..5051 + |
| 1691682855.0592399-UTR-L-elsbetiae_contig11437:4852..5051 | 1691682855.0592399-UTR-L-elsbetiae_contig11437:4852..5051 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig11437 4853..5051 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815350.6378248-CDS-L-elsbetiae_contig11437:3271..3350 | 1622815350.6378248-CDS-L-elsbetiae_contig11437:3271..3350 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11437 3272..3350 + |
| 1691682855.02562-CDS-L-elsbetiae_contig11437:3271..3350 | 1691682855.02562-CDS-L-elsbetiae_contig11437:3271..3350 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11437 3272..3350 + |
| 1622815350.650718-CDS-L-elsbetiae_contig11437:3460..4376 | 1622815350.650718-CDS-L-elsbetiae_contig11437:3460..4376 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11437 3461..4376 + |
| 1691682855.036075-CDS-L-elsbetiae_contig11437:3460..4376 | 1691682855.036075-CDS-L-elsbetiae_contig11437:3460..4376 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11437 3461..4376 + |
| 1622815350.662171-CDS-L-elsbetiae_contig11437:4782..4852 | 1622815350.662171-CDS-L-elsbetiae_contig11437:4782..4852 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11437 4783..4852 + |
| 1691682855.0463579-CDS-L-elsbetiae_contig11437:4782..4852 | 1691682855.0463579-CDS-L-elsbetiae_contig11437:4782..4852 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11437 4783..4852 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11437.1255.1 >prot_L-elsbetiae_contig11437.1255.1 ID=prot_L-elsbetiae_contig11437.1255.1|Name=mRNA_L-elsbetiae_contig11437.1255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=355bp
MINVAKRRRKRCADPGCDKQPSYGVEGSRTAAFCAPHAKEGMVDIWGKVC
AHSGCSKYPSYGVQGSKMREFCAPHAGEGMVHVANSNKKKCAHPGCKKHP
VYGVEGSTVAEFCSPHAEEGMVDIKSKRCAQPGCNKLPSYGTQASKRREF
CVGHAEEGMVNVFQKKNRKRCAHPGCNKCPSDGVQGSKRAEFCAGHVEEG
MVCVHGRKKKCADPGSNKWPSYGVEGSNKRGVCAAHAQEGMMDVRSWGKN
KRCVHLGCQDLACPHLQVDPCSVSERAKQARQAAEEELFVARSAGREAAR
ERPTPEEGHCPAVVKTEGHDMLMLSGAAKAVRRTTGGNKMRHRVGAASPS
NTFL* back to topmRNA from alignment at L-elsbetiae_contig11437:3189..5051+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig11437.1255.1 ID=mRNA_L-elsbetiae_contig11437.1255.1|Name=mRNA_L-elsbetiae_contig11437.1255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1863bp|location=Sequence derived from alignment at L-elsbetiae_contig11437:3189..5051+ (Laminarionema elsbetiae ELsaHSoW15)
ACCTTGGTTGCAGCAAATGGCCGTCGGACGGTGTACAAGGCAGCAAGAGG
GCTGAGTTCTGCGCTGGACACGCGGAGGAAGGAATGATAAATGTCGCCAA
AAGGAGGAGGAAGAGGTGTGCCGACCCTGGTTGCGACAAGCAACCCTCGT
ATGGCGTGGAAGGTAGCAAGACGGCTGTGTTCTGCGCTCCACACGCGGAG
GAGGGAATGGTGAACATCTGGGAAAAGAGGTGTGCCCATCCTGGTTGCGA
TGGCCGTCGTATGGCGTGAAAGGCAGCAGGACCGCTGCGTTCTGCGCTCC
GCACGCGAAGGAGGGAATGGTGGACATCTGGGGGAAGGTGTGTGCCCATT
CTGGTTGCAGCAAGTACCCATCATACGGTGTGCAAGGTAGCAAGATGCGT
GAGTTCTGCGCGCCACACGCGGGGGAGGGGATGGTGCACGTCGCCAACAG
CAATAAGAAGAAGTGTGCCCACCCTGGTTGCAAAAAGCATCCGGTGTACG
GCGTGGAAGGCAGCACAGTGGCCGAGTTCTGCTCCCCACACGCGGAGGAG
GGGATGGTGGACATCAAGAGTAAGAGGTGCGCCCAACCTGGTTGCAACAA
ACTGCCGTCGTACGGCACGCAAGCCAGCAAGAGGCGTGAGTTCTGCGTTG
GACACGCGGAGGAGGGGATGGTGAATGTTTTCCAGAAGAAAAACCGTAAG
AGATGTGCCCACCCAGGGTGCAACAAGTGCCCGTCGGACGGTGTACAAGG
CAGCAAGAGGGCTGAGTTCTGTGCTGGGCACGTAGAGGAGGGGATGGTGT
GCGTCCATGGCAGGAAGAAGAAGTGTGCCGACCCTGGTAGCAACAAATGG
CCGTCGTATGGCGTGGAAGGTAGCAACAAGAGGGGCGTCTGTGCTGCACA
TGCGCAGGAGGGCATGATGGACGTCCGGAGCTGGGGCAAAAATAAGAGGT
GTGTTCACCTAGGGTGCCAGGACCTGGCCTGTCCTCATCTGCAAGTAGAT
CCCTGTTCGGTAAGCGAGCGCGCCAAGCAAGCAAGGCAGGCTGCTGAAGA
AGAGCTGTTTGTGGCGCGGAGTGCAGGGCGAGAAGCCGCGCGTGAACGGC
CTACTCCAGAGGAAGGACACTGCCCCGCTGTGGTGAAGACGGAAGGGCAC
GACATGCTGATGCTGTCGGGCGCAGCGAAAGCTGTGAGGTACGTTGTATT
GTGCACTCTGTTGTTTTTCTTGCGTGCTCCACCTTCGCGTAGAGCACGTG
ATCCCGCCGGCGCTGTTTGACCAAATCACTTCGCAGGCAACTTTTGCACG
CTTTCCTGTCTTGCGTTTTTGCCATGCCTTGAAGAGGTCGAGCGCCTTAG
GCGCATTTTGCAATGCTGGCACGTGCTGGTTTGGCCGGCTGTCCCAGCTT
TTGGGGGCGGGCGGAAAGGTTCCCTCTGCTCCCTAATTTACTGAAATTCT
ACGGCCGACAACCTTCATATGCTCACCAGGTCGTAACTTTGCTTTGCTCC
ACGTAGTCACTGTTACACGTCTAGATACGCCTGTGCCACTGATTAATGAG
ATCGGTTCCGCTCTTGTTTTGTGCTCTGGGTTGCCCGTGGTCAGACGAAC
TACGGGTGGAAACAAGATGAGACACCGGGTTGGAGCAGCATCCCCGAGTA
ATACGTTCCTGTGACTCTGTCAGGCGAAGGGCATACGTGATTCTGAATGG
GTGGATACCAGTAGAACTCTGCCATCCCCTGTGTGCACAAGCACCTCGTC
CTATGTGGATTGGTTTGACGTGTAGTGTGATAATAATCGCCAGAAGATGA
TCGATGGTCGACCATAATGTTAACGGGCCGCTGATGACGTTAAGAAGGCC
ACTTTTTCTCAAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig11437:3189..5051+ >mRNA_L-elsbetiae_contig11437.1255.1 ID=mRNA_L-elsbetiae_contig11437.1255.1|Name=mRNA_L-elsbetiae_contig11437.1255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2130bp|location=Sequence derived from alignment at L-elsbetiae_contig11437:3189..5051+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATAAATGTCGCCAAAAGGAGGAGGAAGAGGTGTGCCGACCCTGGTTG
CGACAAGCAACCCTCGTATGGCGTGGAAGATGATAAATGTCGCCAAAAGG
AGGAGGAAGAGGTGTGCCGACCCTGGTTGCGACAAGCAACCCTCGTATGG
CGTGGAAGGCAGCAGGACCGCTGCGTTCTGCGCTCCGCACGCGAAGGAGG
GAATGGTGGACATCTGGGGGAAGGTGTGTGCCCATTCTGGTTGCAGCAAG
TACCCATCATACGGTGTGCAAGGTAGCAAGATGCGTGAGTTCTGCGCGCC
ACACGCGGGGGAGGGGATGGTGCACGTCGCCAACAGCAATAAGAAGAAGT
GTGCCCACCCTGGTTGCAAAAAGCATCCGGTGTACGGCGTGGAAGGCAGC
ACAGTGGCCGAGTTCTGCTCCCCACACGCGGAGGAGGGGATGGTGGACAT
CAAGAGTAAGAGGTGCGCCCAACCTGGTTGCAACAAACTGCCGTCGTACG
GCACGCAAGCCAGCAAGAGGCGTGAGTTCTGCGTTGGACACGCGGAGGAG
GGGATGGTGAATGTTTTCCAGAAGAAAAACCGTAAGAGATGTGCCCACCC
AGGGTGCAACAAGTGCCCGTCGGACGGTGTACAAGGCAGCAAGAGGGCTG
AGTTCTGTGCTGGGCACGTAGAGGAGGGGATGGTGTGCGTCCATGGCAGG
AAGAAGAAGTGTGCCGACCCTGGTAGCAACAAATGGCCGTCGTATGGCGT
GGAAGGTAGCAACAAGAGGGGCGTCTGTGCTGCACATGCGCAGGAGGGCA
TGATGGACGTCCGGAGCTGGGGCAAAAATAAGAGGTGTGTTCACCTAGGG
TGCCAGGACCTGGCCTGTCCTCATCTGCAAGTAGATCCCTGTTCGGTAAG
CGAGCGCGCCAAGCAAGCAAGGCAGGCTGCTGAAGAAGAGCTGTTTGTGG
CGCGGAGTGCAGGGCGAGAAGCCGCGCGTGAACGGCCTACTCCAGAGGAA
GGACACTGCCCCGCTGTGGTGAAGACGGAAGGGCACGACATGCTGATGCT
GTCGGGCGCAGCGAAAGCTGTGAGGCAGCAGGACCGCTGCGTTCTGCGCT
CCGCACGCGAAGGAGGGAATGGTGGACATCTGGGGGAAGGTGTGTGCCCA
TTCTGGTTGCAGCAAGTACCCATCATACGGTGTGCAAGGTAGCAAGATGC
GTGAGTTCTGCGCGCCACACGCGGGGGAGGGGATGGTGCACGTCGCCAAC
AGCAATAAGAAGAAGTGTGCCCACCCTGGTTGCAAAAAGCATCCGGTGTA
CGGCGTGGAAGGCAGCACAGTGGCCGAGTTCTGCTCCCCACACGCGGAGG
AGGGGATGGTGGACATCAAGAGTAAGAGGTGCGCCCAACCTGGTTGCAAC
AAACTGCCGTCGTACGGCACGCAAGCCAGCAAGAGGCGTGAGTTCTGCGT
TGGACACGCGGAGGAGGGGATGGTGAATGTTTTCCAGAAGAAAAACCGTA
AGAGATGTGCCCACCCAGGGTGCAACAAGTGCCCGTCGGACGGTGTACAA
GGCAGCAAGAGGGCTGAGTTCTGTGCTGGGCACGTAGAGGAGGGGATGGT
GTGCGTCCATGGCAGGAAGAAGAAGTGTGCCGACCCTGGTAGCAACAAAT
GGCCGTCGTATGGCGTGGAAGGTAGCAACAAGAGGGGCGTCTGTGCTGCA
CATGCGCAGGAGGGCATGATGGACGTCCGGAGCTGGGGCAAAAATAAGAG
GTGTGTTCACCTAGGGTGCCAGGACCTGGCCTGTCCTCATCTGCAAGTAG
ATCCCTGTTCGGTAAGCGAGCGCGCCAAGCAAGCAAGGCAGGCTGCTGAA
GAAGAGCTGTTTGTGGCGCGGAGTGCAGGGCGAGAAGCCGCGCGTGAACG
GCCTACTCCAGAGGAAGGACACTGCCCCGCTGTGGTGAAGACGGAAGGGC
ACGACATGCTGATGCTGTCGGGCGCAGCGAAAGCTGTGAGACGAACTACG
GGTGGAAACAAGATGAGACACCGGGTTGGAGCAGCATCCCCGAGTAATAC
GTTCCTGTGAACGAACTACGGGTGGAAACAAGATGAGACACCGGGTTGGA
GCAGCATCCCCGAGTAATACGTTCCTGTGA back to top
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