prot_L-elsbetiae_contig11437.1255.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11437.1255.1
Unique Nameprot_L-elsbetiae_contig11437.1255.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length355
Homology
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BLAST of mRNA_L-elsbetiae_contig11437.1255.1 vs. uniprot
Match: D7FT26_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT26_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 5.380e-5
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:   10 KRCADPGCDKQPSYGVEGSRTAAFCAPHAKEGM 42
            KRC+ P C K+P+YGVEGS+TA FCAPHA+ GM
Sbjct:   45 KRCSFPQCRKRPTYGVEGSKTAEFCAPHAQPGM 77
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11437.1255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT26_ECTSI5.380e-569.70EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT26... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11437contigL-elsbetiae_contig11437:3272..4852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11437.1255.1mRNA_L-elsbetiae_contig11437.1255.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11437 3189..5051 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11437.1255.1 ID=prot_L-elsbetiae_contig11437.1255.1|Name=mRNA_L-elsbetiae_contig11437.1255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=355bp
MINVAKRRRKRCADPGCDKQPSYGVEGSRTAAFCAPHAKEGMVDIWGKVC
AHSGCSKYPSYGVQGSKMREFCAPHAGEGMVHVANSNKKKCAHPGCKKHP
VYGVEGSTVAEFCSPHAEEGMVDIKSKRCAQPGCNKLPSYGTQASKRREF
CVGHAEEGMVNVFQKKNRKRCAHPGCNKCPSDGVQGSKRAEFCAGHVEEG
MVCVHGRKKKCADPGSNKWPSYGVEGSNKRGVCAAHAQEGMMDVRSWGKN
KRCVHLGCQDLACPHLQVDPCSVSERAKQARQAAEEELFVARSAGREAAR
ERPTPEEGHCPAVVKTEGHDMLMLSGAAKAVRRTTGGNKMRHRVGAASPS
NTFL*
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