mRNA_L-elsbetiae_contig10946.852.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Match: D8LMK7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK7_ECTSI) HSP 1 Score: 191 bits (486), Expect = 4.820e-54 Identity = 101/164 (61.59%), Postives = 117/164 (71.34%), Query Frame = 3 Query: 3 VVLALSLRRDFWDNVLSQAVMSNYEAHLSTRPEVLDPPADDMSRGGGQGRWRASLRASNVVMQWDPDHKPFTGHKTSHRVIQLGLRGDALAAFRGPAFGEGGIQDMTPFAKATYDRHQTDMGSGGA----------------LLLPAEEPYPVGNAEVAQRLGI 446 VVLAL+LRRDFWD+VLSQAVMSNYE++ ST + ++ RG Q RW+ASL+AS+VVMQWDPDH PFTGHKT+HR IQLGLRGDALAAFRGPAFGE GIQD++ FAKAT + H+ G LLLP EE YPV +A VAQRLGI Sbjct: 98 VVLALALRRDFWDDVLSQAVMSNYESYRSTM-------SAEVPRGDAQRRWKASLQASDVVMQWDPDHMPFTGHKTNHRAIQLGLRGDALAAFRGPAFGETGIQDVSAFAKATEEIHRPRAADGXXXXXXXXXXXXXXXXXXLLLPIEETYPVVDASVAQRLGI 254
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Match: A0A0G4EX75_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EX75_VITBC) HSP 1 Score: 89.4 bits (220), Expect = 1.620e-16 Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 3 Query: 6 VLALSLRRDFWDNVLSQAVMSNYEAHLSTRPEVLDPPADDMSRGGGQGRWRASLRASNVVMQWDPDHKPFTGHKTSHRVIQLGLRGDALAAFRGPAFGEGGIQDMTPFAKATYDRHQTDMGSGGALLLPAEEPYPVGNAEVAQRLGIA*RC 458 VLAL LRR F+D +L +AV S+Y+ TR W+A++ ++VVMQWDPDH PFT R IQLG+RGD L A G ++D+T +R + D+ L P E+ YPV + V RL + C Sbjct: 97 VLALRLRRCFFDRLLGEAVHSSYQEIYGTREA-----------------WKAAIGETSVVMQWDPDHVPFTNDTLPRRAIQLGVRGDLLREMCTDALGS--VEDVTDLVHTLDERCRNDVER---LCTPTEDVYPVADDAVRFRLLFSHAC 225
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Match: UPI0002484C7C (DUF4291 domain-containing protein n=1 Tax=Acaryochloris sp. CCMEE 5410 TaxID=310037 RepID=UPI0002484C7C) HSP 1 Score: 87.0 bits (214), Expect = 5.800e-16 Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = 3 Query: 3 VVLALSLRRDFWDNVLSQAVMSNYEAHLSTRPEVLDPPADDMSRGGGQGRWRASLRASNVVMQWDPDHKPFTGHKTSHRVIQLGLRGDALAAFRGPAFGEGGIQDMTPFAKATYDRHQTDMGSGGALLLPAEEPYPVGNAEVAQRLGIA 449 V+LA+ L+R +D++L+QAV S++++ L E W+ ++ AS+V +QWDPDH P G+K R IQLGLR +A+ + + I+D++ F R G+ ALL PAE YPV + EVA +L +A Sbjct: 84 VILAIRLKRSAFDSILAQAVHSSFQSGLYESQEA----------------WQKAVHASDVRLQWDPDHNP-AGYKLERRAIQLGLRREAIRQYAQEWILD--IEDISNFV--AEQRESVISGNYEALLTPAESAYPVKDLEVATKLQLA 211
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Match: R7Q6M0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6M0_CHOCR) HSP 1 Score: 87.8 bits (216), Expect = 7.860e-16 Identity = 59/147 (40.14%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 6 VLALSLRRDFWDNVLSQAVMSNYEAHLSTRPEVLDPPADDMSRGGGQGRWRASLRASNVVMQWDPDHKPFTGHKTSHRVIQLGLRGDALAAFRGPAFGEGGIQDMTPFAKATYDRHQTDMGSGGALLLPAEEPYPVGNAEVAQRLGI 446 +LA+ L R ++D +L QAV S++ D + G + W +LRAS VV+QWDPDH TG K +RVIQLG+R AL FRG FG I D+T AKA T G A P E+ YP+ + A LGI Sbjct: 128 ILAIRLTRTYFDQLLQQAVSSSW----------------DGASYGSREEWHKALRASKVVVQWDPDHHLVTGAKLPYRVIQLGIRAGALEGFRG--FGIVSITDITTQAKAMQQDISTASGLRDAQT-PWEKRYPISGSMKAT-LGI 254
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Match: D6TXL8_9CHLR (Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 TaxID=485913 RepID=D6TXL8_9CHLR) HSP 1 Score: 85.9 bits (211), Expect = 1.950e-15 Identity = 62/153 (40.52%), Postives = 80/153 (52.29%), Query Frame = 3 Query: 3 VVLALSLRRDFWDNVLSQAVMSNYEAHLSTRPEVLDPPADDMSRGGGQGRWRASLRASNVVMQWDPDHKPFTGHKTSHRVIQLGLRGDALAAFRGPAFGEGGIQDMTPFAKATYDRHQTDMGSGGALLLPAEEPYPVGNAEVAQRLGIA*RCL 461 +VLA+ L+RD +D +LSQAV S Y A L P+D W A LR S VV+QWDPDH P TGH+ S IQLGLRG+ALA + I+D++ F R + L +P E YPV + VA RL +A + L Sbjct: 85 IVLAVFLKRDAFDWLLSQAVHSLYHADLY--------PSDTA--------WYAQLRRSPVVLQWDPDHAP-TGHRLSRSAIQLGLRGEALAKYAREWIVA--IEDISDFV--AQQRLFVQTKAFEQLQVPYETVYPVADPVVAARLLLAQKTL 216
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Match: A0A098U3V4_9BURK (Uncharacterized protein n=1 Tax=Massilia sp. JS1662 TaxID=1519190 RepID=A0A098U3V4_9BURK) HSP 1 Score: 85.5 bits (210), Expect = 2.040e-15 Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 6 VLALSLRRDFWDNVLSQAVMSNYEAHLSTRPEVLDPPADDMSRGGGQGRWRASLRASNVVMQWDPDHKPFTGHKTSHRVIQLGLRGDALAAFRGPAFGEGGIQDMTPFAKATYDRHQTDMGSGGALLLPAEEPYPVGNAEVAQRLGI 446 +LA+S+RR F++ VL++AV S++ A S + W+ ++ +S+V +QWDPDH PF G + R +QLGLRG+ LA + A GI+D+T F + ++H G AL+ P E Y G+ A+ LGI Sbjct: 83 ILAISIRRTFFERVLARAVASSFVA----------------SGYSDEATWKRAIESSDVRLQWDPDHDPF-GQSVARRAVQLGLRGEILAEYGTTAIT--GIEDITEFVR---EQHGNVAGDCRALITPRERVYVPGDT-AARNLGI 206
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Match: A0A5C6ELD6_9BACT (Uncharacterized protein n=1 Tax=Rubripirellula reticaptiva TaxID=2528013 RepID=A0A5C6ELD6_9BACT) HSP 1 Score: 84.3 bits (207), Expect = 5.920e-15 Identity = 52/148 (35.14%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 3 VVLALSLRRDFWDNVLSQAVMSNYEAHLSTRPEVLDPPADDMSRGGGQGRWRASLRASNVVMQWDPDHKPFTGHKTSHRVIQLGLRGDALAAFRGPAFGEGGIQDMTPFAKATYDRHQTDMGSGGALLLPAEEPYPVGNAEVAQRLGI 446 V+LA+ LRR F+D++L Q V S++ + L + + W+A++ SNV +QWDPDH P TGHK R IQLGLRG+ L A+ E I +++ F R G L+ PAE Y + +A LG+ Sbjct: 90 VILAIRLRRTFFDSLLQQTVPSSFTSALYSDHD----------------EWKAAVGRSNVRLQWDPDHTP-TGHKCERRAIQLGLRGETLEAYGKHEALE--IINVSDFV--AEQREHIGSWKSGTLVTPAERVYVPADCNIADHLGL 216
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Match: A0A6P0XLB1_9CYAN (DUF4291 domain-containing protein n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0XLB1_9CYAN) HSP 1 Score: 82.0 bits (201), Expect = 3.240e-14 Identity = 47/149 (31.54%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 3 VVLALSLRRDFWDNVLSQAVMSNYEAHLSTRPEVLDPPADDMSRGGGQGRWRASLRASNVVMQWDPDHKPFTGHKTSHRVIQLGLRGDALAAFRGPAFGEGGIQDMTPFAKATYDRHQTDMGSGGALLLPAEEPYPVGNAEVAQRLGIA 449 V+LA++++R +D +L+ AV SN+ + E W+ +L+ S V +QWDPDH P G K R IQLGLRG+ L + + I+D+T F + + ++ + L+ P E YPV N+E+ +LG++ Sbjct: 84 VILAVTIKRTAFDEILANAVHSNFIPTIYKTQE----------------EWKKTLKRSPVRLQWDPDHNPM-GQKVERRAIQLGLRGEILRNYSRNWIVK--IEDITEFVRQQHSNKESSKWTD--LITPKENVYPVDNSEIIYKLGLS 211
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Match: A0A0G3BNW7_9BURK (Uncharacterized protein n=1 Tax=Schlegelella brevitalea TaxID=413882 RepID=A0A0G3BNW7_9BURK) HSP 1 Score: 84.0 bits (206), Expect = 4.610e-14 Identity = 54/135 (40.00%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 6 VLALSLRRDFWDNVLSQAVMSNYEAHLSTRPEVLDPPADDMSRGGGQGRWRASLRASNVVMQWDPDHKPFTGHKTSHRVIQLGLRGDALAAFRGPAFGEGGIQDMTPFAKATYDRHQTDMGSGGALLLPAEEPYP 410 +LAL +RR+F+D +L QAV S+++A +R + W ++ AS V +QWDPDH P +G K + R +QLGLRG LA + A E + DMT F AT H D S LL P EE YP Sbjct: 209 ILALRVRREFFDALLEQAVPSSFDA----------------TRYASRQAWSDAVAASEVRLQWDPDHAP-SGAKLARRAVQLGLRGSVLARYAKEALVE--VVDMTGFV-ATQRPHAADDSS--ELLTPVEEVYP 321
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Match: UPI001557C50E (DUF4291 domain-containing protein n=1 Tax=Niveibacterium sp. COAC-50 TaxID=2729384 RepID=UPI001557C50E) HSP 1 Score: 80.9 bits (198), Expect = 7.810e-14 Identity = 55/136 (40.44%), Postives = 72/136 (52.94%), Query Frame = 3 Query: 6 VLALSLRRDFWDNVLSQAVMSNYEAHLSTRPEVLDPPADDMSRGGGQGR--WRASLRASNVVMQWDPDHKPFTGHKTSHRVIQLGLRGDALAAFRGPAFGEGGIQDMTPFAKATYDRHQTDMGSGGALLLPAEEPY 407 +LA+ LRR F+D +L QAV S+ A G GQ R W+A+++AS+V +QWDPDH P +G R +QLGLRG AL + A I DMT F +T RH T+ ALL+P E Y Sbjct: 83 ILAVRLRRTFFDALLEQAVSSSLPA------------------GSGQSREDWQAAVKASDVRLQWDPDHDP-SGGPIDRRAVQLGLRGRALETYGKSAIVS--IADMTEFV-STQRRHVTEQCE--ALLMPVEHIY 194 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10946.852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10946.852.1 >prot_L-elsbetiae_contig10946.852.1 ID=prot_L-elsbetiae_contig10946.852.1|Name=mRNA_L-elsbetiae_contig10946.852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp MSNYEAHLSTRPEVLDPPADDMSRGGGQGRWRASLRASNVVMQWDPDHKPback to top mRNA from alignment at L-elsbetiae_contig10946:3461..5828- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10946.852.1 ID=mRNA_L-elsbetiae_contig10946.852.1|Name=mRNA_L-elsbetiae_contig10946.852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2368bp|location=Sequence derived from alignment at L-elsbetiae_contig10946:3461..5828- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10946:3461..5828- >mRNA_L-elsbetiae_contig10946.852.1 ID=mRNA_L-elsbetiae_contig10946.852.1|Name=mRNA_L-elsbetiae_contig10946.852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=780bp|location=Sequence derived from alignment at L-elsbetiae_contig10946:3461..5828- (Laminarionema elsbetiae ELsaHSoW15)back to top |