mRNA_L-elsbetiae_contig10931.846.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10931.846.1
Unique NamemRNA_L-elsbetiae_contig10931.846.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 1.950e-114
Identity = 201/234 (85.90%), Postives = 208/234 (88.89%), Query Frame = 1
Query:    1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPASDALLEARAAIATMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 702
            TEIMDLSEESKEAQQEHARLL+QVE++RRARTMVVPTKTEDVA KLR LGQPVRLFSENVADIRERLRRFIAASEMEDEE EKI+GMVAPKPSFVPR+MQMGGE AAG  XXXXX            PPAAKK EVVYTPASDALLEARAAIATMSF RAK RLAGAKRRRG PEE  A+DR+A ET STMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE
Sbjct:   72 TEIMDLSEESKEAQQEHARLLKQVEADRRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAAXXXXX------------PPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 293          
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A835YL38_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL38_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.950e-40
Identity = 105/236 (44.49%), Postives = 138/236 (58.47%), Query Frame = 1
Query:    1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAK--KAEVVYTPASDALLEARAAIATMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 702
            TE+M+LS  S+E Q +HA +LR+VE+ RRARTM VPT  E+VA  LR LGQP+RLFSE +AD+RERLR  +A  +++ E    +  ++A                                 PA AA  A +  KAEVVYT A+  L+EAR  IA+ SFA A  RLA AKRRR     A A D  A    + +K L IN S   D+RPLSA++VSPDG  VAS +W+ + KLW+++
Sbjct:   49 TEVMELSAASREEQDKHAEMLRKVEAHRRARTMAVPTLPEEVARALRRLGQPIRLFSETLADVRERLREHLAQLQLDGEGDAAVASLLAA------------------------------AEPAKAAAAAVEEGKAEVVYTVAAAPLIEAREVIASYSFAAAPQRLARAKRRRLDSAVASAEDAAAAAACTRLKGLVINVSAVGDERPLSAVRVSPDGSLVASAAWSGVAKLWNMK 254          
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: G4ZDF0_PHYSP (SFM domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZDF0_PHYSP)

HSP 1 Score: 122 bits (305), Expect = 2.200e-28
Identity = 92/239 (38.49%), Postives = 134/239 (56.07%), Query Frame = 1
Query:    1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAE--VVYTPA-SDALLEARAAIA--TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 702
            TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT  E+V  +LR LG+P+ LF E  AD RERLR  ++  E+E EET  +  ++A        + Q GG  A                  GAA  A+K  E  + Y P  +D L  ARAA+   T S   A+ +    +++  A E A  +D  A E  +T   +A  +SQ  D RPL++++ S DG  VA+GSW+ LVK+WD  
Sbjct:   54 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLADI------QKQDGGAGAPAEGTAAGDE--------GAAGQASKPQEDQLFYVPIKNDGLKTARAAVFAHTTSVVGARLKRERQEKQMSAEERARTMDHHAAELYATALRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWDAN 278          
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A662XLR5_9STRA (SFM domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLR5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.290e-28
Identity = 101/237 (42.62%), Postives = 143/237 (60.34%), Query Frame = 1
Query:    1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAP--KPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPASDALLE-ARAAIATMSFARAKGRLAGAKRRR--GAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696
            TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT  ++V  +LR LG+PV LF E  AD RERLR  ++  E+E EET  +  ++A   K    P      GE AA XXXXXXXXXXX            ++ ++ Y P  +  L+ ARAAI   S +    RL   ++ +   A E   A+DR A E  +T   +A  +SQ  D RPL++++ SPDG  VA+GSW+ LVK+WD
Sbjct:   60 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVDEVIRRLRQLGEPVTLFGERPADRRERLRELLSRLELEAEETGFVHQVLADIQKQGSAPGA----GEEAAXXXXXXXXXXXXKP----------QEDQLFYVPIKNVELKNARAAIFAHSVSAGSARLKRERQEKQLSAEERTRAVDRHAAELYATAAKMANIASQNGDVRPLASVRYSPDGAHVATGSWSSLVKVWD 282          
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A2P4X876_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X876_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.610e-28
Identity = 86/238 (36.13%), Postives = 136/238 (57.14%), Query Frame = 1
Query:    1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMG-GEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPA-SDALLEARAAIA--TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 702
            TE+++LSE S+ AQ++HA+LLR++E+E+RAR + VPT  E+V  +LR LG+P+ LF E  AD RERLR  ++  E+E EET  +  ++A       ++ ++G G   +G              P        ++ ++ Y P  ++ L  ARAAI   T +   A+ +    +R+  A E A  +D+ A E  +T   +A  +SQ  D RPL++++ S DG  VA+GSW+ LVK+WD  
Sbjct:   54 TEVLELSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLADI-----QKQEVGTGAGESGAATREERRAGRYTKP--------QEDQLFYVPIKNEKLKSARAAIFAHTTTVVGARLKRERQERQMSAEERARTVDQHAAELYATALKMANIASQNGDVRPLASVRFSADGNHVATGSWSSLVKVWDAS 278          
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A3R7GQX6_9STRA (SFM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GQX6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.390e-27
Identity = 90/237 (37.97%), Postives = 132/237 (55.70%), Query Frame = 1
Query:    1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAP--KPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPA-SDALLEARAAIA--TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696
            TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT  E+V  +LR LG+P+ LF E  AD RERLR  ++  E+E EET  +  ++A   K   VP     GGE  AG                       ++ E+ Y P  +D L + RAAI   T S   A+ +    +++    E A  +D  A E  +T   +A  +SQ  D RPL++++ S DG  VA+GSW+ LVK+WD
Sbjct:   57 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLRGILSQLELEAEETGFVHQVLADIQKQGAVPG----GGETIAGETGAEADQSDKP-----------QEDELFYVPIKNDQLKKVRAAIFDHTTSIVGARLKRERQEKQMSEEERARTVDHHAAELYATTLRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWD 278          
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: W2R6V2_PHYPN (SFM domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2R6V2_PHYPN)

HSP 1 Score: 117 bits (292), Expect = 1.320e-26
Identity = 91/237 (38.40%), Postives = 131/237 (55.27%), Query Frame = 1
Query:    1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAE--VVYTPA-SDALLEARAAIA--TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696
            TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT  E+V  +LR LG+P+ LF E  AD RERLR  ++  E+E EET  +  ++A        + Q  G  AAG                GAA  A K  E  + Y P  ++AL   RA I   T S    + +    ++R    E A  +D  A E  +T   +A  +SQ  D RPL++++ S DG  VA+GSW+ LVK+WD
Sbjct:   54 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHEVLADI------QRQDAGAGAAGAE--------------GAARKATKPQEDQLFYVPIKNEALKGVRATIFAHTASVVGTRLKRERQEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWD 270          
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: M4B2G3_HYAAE (SFM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2G3_HYAAE)

HSP 1 Score: 117 bits (292), Expect = 1.350e-26
Identity = 85/235 (36.17%), Postives = 129/235 (54.89%), Query Frame = 1
Query:    1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTP-ASDALLEARAAIATMSFARAKGRLAGAKRRRG--APEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696
            TE+++LSE S+ AQ++HA+LLR+VE+E+RAR + VPT  E+V  KLR LG+P+ LF E  AD RERLR  ++  ++E EE   ++ +              G E AAG                      A ++++ Y P  ++ + + RA I   + +    RL   ++ R   A E A  +D+ A    S  + +A  +SQ  D RP+SA++ S DGG VA+GSW+ LVK+WD
Sbjct:   51 TEVLELSESSRAAQEKHAQLLRRVEAEKRARNVAVPTVVEEVIRKLRQLGEPITLFGERPADRRERLREILSRLDVEAEENGYVRQVFGDIEKQEIAADAAGDERAAGAGETATGKLSR-----------AHESQLFYVPLTNEKMKKVRATIFAHASSATGARLKRERQERSMSAEERARTVDQYAAGLYSAAQKMANVASQNGDVRPISAVRFSADGGHVATGSWSSLVKVWD 274          
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: H3GS79_PHYRM (SFM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GS79_PHYRM)

HSP 1 Score: 116 bits (290), Expect = 2.550e-26
Identity = 86/235 (36.60%), Postives = 127/235 (54.04%), Query Frame = 1
Query:    1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPA-SDALLEARAAIATMSFARAKGRLAGAKRRR--GAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696
            TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT  E+V  +LR LG+P+ LF E  AD RERLR  ++  E+E EET  +  ++A         +Q  G  A G            VA     P   +  ++ Y P  ++ L +AR AI   +      RL   ++ +     E A  +D  A E  +T   +A   SQ  D RPL+ ++ S DG  VA+GSW+ LVK+WD
Sbjct:   51 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNISVPTSVEEVVRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLAD--------VQKQGPGAGGTETGAASEEVVHVAGRAVRP---QMDQLFYVPLKNEKLKKARTAIFAHASTVVGARLKRERQEKQMSVEERARTVDHHAAELYATALKMANIGSQNGDVRPLAGVRYSADGAHVATGSWSSLVKVWD 274          
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A3F2S1S9_9STRA (SFM domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1S9_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.080e-26
Identity = 88/237 (37.13%), Postives = 131/237 (55.27%), Query Frame = 1
Query:    1 TEIMDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAP--KPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPA-SDALLEARAAIA--TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 696
            TE++ LSE S+ AQ++HA+LLR++E+E+RAR + VPT  E+V  +LR LG+P+ LF E  AD RERLR  ++  E+E EET  +  ++A   K   VP     G E  AG                       ++ E+ Y P  ++ L + RAAI   T S   A+ +    +++    E A  +D  A E  +T   +A  +SQ  D RPL++++ S DG  VA+GSW+ LVK+WD
Sbjct:   57 TEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLRGILSQLELEAEETGFVHQVLADIQKQGAVPG----GDETTAGETGAEADQSDKP-----------QEDELFYVPIKNEQLKKVRAAIFDHTTSIVGARLKRERQEKQMSEEERARTVDHHAAELYATTLRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWD 278          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGI0_ECTSI1.950e-11485.90SFM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YL38_9STRA5.950e-4044.49Quinon protein alcohol dehydrogenase-like superfam... [more]
G4ZDF0_PHYSP2.200e-2838.49SFM domain-containing protein n=5 Tax=Phytophthora... [more]
A0A662XLR5_9STRA2.290e-2842.62SFM domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A2P4X876_9STRA4.610e-2836.13U4/U6 small nuclear ribonucleoprotein Prp4 (Fragme... [more]
A0A3R7GQX6_9STRA1.390e-2737.97SFM domain-containing protein n=2 Tax=Phytophthora... [more]
W2R6V2_PHYPN1.320e-2638.40SFM domain-containing protein n=14 Tax=Phytophthor... [more]
M4B2G3_HYAAE1.350e-2636.17SFM domain-containing protein n=1 Tax=Hyaloperonos... [more]
H3GS79_PHYRM2.550e-2636.60SFM domain-containing protein n=1 Tax=Phytophthora... [more]
A0A3F2S1S9_9STRA3.080e-2637.13SFM domain-containing protein n=3 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10931contigL-elsbetiae_contig10931:2710..6451 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.4
Seed ortholog evalue1.3e-93
Seed eggNOG ortholog2880.D8LGI0
KEGG koko:K12662
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0015030,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0017069,GO:0017070,GO:0030532,GO:0030621,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0046540,GO:0070013,GO:0071001,GO:0071005,GO:0071011,GO:0071704,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.U4 snRNA binding
EggNOG OGsKOG0272@1,KOG0272@2759
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-10_001990.2
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons5
Model size702
Cds size693
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10931.846.1prot_L-elsbetiae_contig10931.846.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10931 2719..6451 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815311.3800159-UTR-L-elsbetiae_contig10931:2709..27181622815311.3800159-UTR-L-elsbetiae_contig10931:2709..2718Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10931 2710..2718 +
1691682830.9443743-UTR-L-elsbetiae_contig10931:2709..27181691682830.9443743-UTR-L-elsbetiae_contig10931:2709..2718Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10931 2710..2718 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815311.3919604-CDS-L-elsbetiae_contig10931:2718..28531622815311.3919604-CDS-L-elsbetiae_contig10931:2718..2853Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10931 2719..2853 +
1691682830.956904-CDS-L-elsbetiae_contig10931:2718..28531691682830.956904-CDS-L-elsbetiae_contig10931:2718..2853Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10931 2719..2853 +
1622815311.4067082-CDS-L-elsbetiae_contig10931:3422..34971622815311.4067082-CDS-L-elsbetiae_contig10931:3422..3497Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10931 3423..3497 +
1691682830.9651668-CDS-L-elsbetiae_contig10931:3422..34971691682830.9651668-CDS-L-elsbetiae_contig10931:3422..3497Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10931 3423..3497 +
1622815311.4182029-CDS-L-elsbetiae_contig10931:4518..47401622815311.4182029-CDS-L-elsbetiae_contig10931:4518..4740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10931 4519..4740 +
1691682830.9735909-CDS-L-elsbetiae_contig10931:4518..47401691682830.9735909-CDS-L-elsbetiae_contig10931:4518..4740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10931 4519..4740 +
1622815311.428389-CDS-L-elsbetiae_contig10931:5845..60371622815311.428389-CDS-L-elsbetiae_contig10931:5845..6037Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10931 5846..6037 +
1691682830.9814727-CDS-L-elsbetiae_contig10931:5845..60371691682830.9814727-CDS-L-elsbetiae_contig10931:5845..6037Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10931 5846..6037 +
1622815311.4409034-CDS-L-elsbetiae_contig10931:6382..64511622815311.4409034-CDS-L-elsbetiae_contig10931:6382..6451Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10931 6383..6451 +
1691682830.9898157-CDS-L-elsbetiae_contig10931:6382..64511691682830.9898157-CDS-L-elsbetiae_contig10931:6382..6451Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10931 6383..6451 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10931.846.1

>prot_L-elsbetiae_contig10931.846.1 ID=prot_L-elsbetiae_contig10931.846.1|Name=mRNA_L-elsbetiae_contig10931.846.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPV
RLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGG
EAAAGAGAGAGAGAAGAVAPAGAAPPAAKKAEVVYTPASDALLEARAAIA
TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFAD
DRPLSAIQVSPDGGTVASGSWTCLVKLWDIE
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mRNA from alignment at L-elsbetiae_contig10931:2710..6451+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10931.846.1 ID=mRNA_L-elsbetiae_contig10931.846.1|Name=mRNA_L-elsbetiae_contig10931.846.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3742bp|location=Sequence derived from alignment at L-elsbetiae_contig10931:2710..6451+ (Laminarionema elsbetiae ELsaHSoW15)
ACGGAGATTATGGACCTCTCGGAGGAGAGCAAGGAGGCGCAGCAGGAGCA CGCTCGGCTACTCAGGCAGGTGGAGTCGGAGCGGCGAGCCAGGACCATGG TGGTGCCCACCAAGACCGAGGACGTGGCCAGCAAGCTCAGGTATGTGCAT GTCTTACGTGTGCGAAACGCACTCGCTAGCCTCCTTGGGAGCTCTCTTTC GTGATGACTGCTGTGTGAGTTTCATCGAACATGGCTCGGTAGACGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGTGTACGTGTATG TGTGTATGTGTGTGTGCTTGTGTGTACGTGTATGTGTACGTGTGCGTGCG TGTGTGTGTGTGTGTGTGTGTGTGCGAGCGTGCGTGCGTGCGTGCCGTGT GCAGTAATTATCTGTTGAGCGTGTGTTCAAACGAAATCAGTAAAAGCACC GGCCCGCACTGCATCCGCTCTGTATGCACCGCCGAGTTGTTGCCGTAGTG TTTAGTGTTTCTACTCCGCGTGTCGTCTCATCGCCATCTCTCTGTCTCTC TGTTTGTGTCTTGTACTTCTCGCTCTCTTTCTCGATCTCTTTATCCTCTG TCTCTGTCTCTCTGTCTCTCTGTCTCCCCCCCCCCCCTATCGCTCTCTCT GCGCGCTCGCGTGTTGTTTGCTCTCCCTTTCGCCCATCAACATGAACCTG CACGCGCAGAGAGCTAGGTCAACCGGTTCGGCTCTTCTCGGAGAACGTCG CCGACATCAGGGAGCGTCTTCGGAGATTCATCGCCGCGGTAAGTCGGGAC GAATTGCCAGGTGCCGCGCCGGACTTCCTGCCTTTGGGTCGATGGGGCTT TGGTTGGTCGATATAAAAGCCGAAGGGCAGAGTGCCGAAACAGGGCCTGC GCTATTTATGTTTCTCTACGAGGTATGTACAAGTTCCCCTTTCAGACGTT GCTCATGGCCGGAACAATTCGGGGGGGTGAAGCAAGAGAACAACAGGGTT GACTGCTGTTGTTCGAGTTGCGCACACTACGCGTTGCCGTGTCGCACTAA AGAGCCAGAACTGGCGCACATCGCGACGTGCTTCGCCACCTTTGAAAAGT CTCCTGAAAAGCCTGGTTCCAGTGCCCTTGAGTGGCTTGACCAACAGCCC GCAGACCGTGCACCCAGAGAAAGCTCAATCTGTATATAGTCATATCGTGC GCTCCTCCAGTTTTTCGTCTGGGTTATTCCCGAAATACGTACCTGGTGTG TATGTTTTTGCTCAGAAGACGTCACCAAGCGACAGCGTGCGGGAGCGACA GCTACTCTAAAAACGAGTTGAGGACGAAGACAGAGAGGATCTACATGAGC CCGGTTGGGTGTAGCTAGTCGTAGTGGAGGAAGGGGACCAGTGGGGCAGA AGACGAACAAGCCAATCATGGGAAGAAGAAAAAAAAAACGCATGTAGGAG TAGTACACGTTAGGGTTAGGGTTAGGGTTAGGGTTACTTTTCCCCCGGAG TGCATTATACGAGAAGGCCTTCTCCAGCCGACCGCGTGCGGGCGACGGCT TCTGGGCCTTTGAATAAGGGCGGAGACAAGACAGAGCAGGCCATGCAAGC GTCCGCGCTTCCTCTTGTATAAGGAAAGCACGGCATAAAGGGCCACAAAC GACTAAATAGTTGGAGGTACGTATTTTTCTCGCCGAGGTTATTTTTCTCT TTCCGAAGCCACCTTTTCCGATCAAAATCGCCACCATACCAACACCCCCC CCCCCCTCTCCCCTTCCCCTCCGCGGGCCCGCCTGCGCGTGCACGAACAA CGCGAACAGTCCGAGATGGAGGATGAGGAGACAGAGAAGATCCAGGGCAT GGTAGCCCCCAAGCCATCCTTCGTGCCCAGGAGGATGCAGATGGGAGGCG AGGCGGCGGCAGGGGCAGGGGCAGGGGCAGGGGCCGGGGCGGCGGGCGCC GTCGCCCCTGCAGGAGCGGCGCCACCGGCGGCGAAGAAAGCGGAGGTGGT TTATACCCCTGCCTCCGACGCTCTCCTCGAGGTGAGGGCCGGACGGTTCG GTTCGGTTCGGTTCGTGACGGAGGGTACCGCCTCCGCGAATAATCCCTGC AATTCCTGTCTATTACATTAAATATAATAAACAGGGGTTCCGTAACCGCA ACCCTAACCCTAACCCCCAAACCGACCCCCCATTGGCAATTTCCATACTT TATGTCCCATATGATTTCTTCCAGTAAAAACCTGCGAAAGCTTACTGGAC GGAGGGGGGGGATTTCGGTGGCGTTTGTGTGTATTTTTTGTTTTGGCAGT GTTGGTGTTGGTTGGTGGTGTTGGTGAGTCGCTGATCGTGTTGTATTTGG TTGCTCACAGCGGTGTGGCCGAATCGAAGTTATTTGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTGCTGGAGTTTTGTCAGTGGGTACAGGGTGTTCTCA GGGCTGGACCTAGTTTGCACGTTTTTGTCTTATTTTTGTGCATTTTTTTC TAGATTGGCATACACACGCGTGTAAGAGCGGTTTATGCACACAGACAAGT AGTTTGTTTGTGCAAGTTTTCCCTCTATATGTTTTTGCGCGTCCTTATGC ACGCTTTTCTTGCCCTCCAGTACCCTGTTTTACTTGTTTTTTTGGGTTCA ACGCTTAACGTAGGGCGGGGTGTTCTGGTTGCCGTTGTGACGGTACCCCA ATATGACTATATATAGACGTCTGTGGGATGATTGATGGTCAAGCCAGCCA CCTGGAACCAGGGTTTTCAGGAGACTTTTCAAGGCTGGCCACGCACGTGG TGACGTACGCCAGTTCTGGCTCTTTTAAGTGTAACACGGCAACTCATAGC GTTGCGCAACTCAAATAGCAGCAATCAACACTGTTCTCTTGCTTTCGCCC CCTGAATTGTTCCGGTCATGAGCAACGTCTGAAAGGGGAACTCGTACGTA CTACGGTAGGATACGTGTTGGTGGTAAAAACTCCTCCAAGGCTCTTGCGC GACGCGCGGCCCATTTGTCAACTGATGTTCCCACCTCGAGCGAGCAGCGC ATCAGACAACAATAGGCGGTCGGTGCCCTCCTCACTCTACAACATACCAT ACCTTTTTTTGGCGAACTTTCTTCTCCCGCACAAAGGCAAGAGCGGCTAT CGCGACGATGTCGTTCGCGCGAGCCAAGGGCCGGCTGGCGGGGGCGAAGC GGCGCCGCGGGGCCCCCGAGGAGGCGTTGGCGTTGGACCGCCAGGCCGGC GAGACACTTTCGACGATGAAGAACCTGGCCATCAACTCGAGTCAGTTCGC TGACGACCGTCCTCTCTCGGCTATACAGGTGTGGCGGCGGTGGTCTTGGC TGAGCCGTTTGTCGTTGGTCGTTGGGGTCGGTGTTGGATGGAGAGGTAAC TGCTGCTCGACGTTGTTGTTGCTGTTGTTGTTGTGTTATTTGTTGTTGTT GCTCGCTGTTGCTGATGGATGGGTGGTGTTGTCAATCTCTTGAGGTTGTG GCACTCGGTGCAGTTGCTGCCGGGGTTTCTTGGCGTGCGCATTCAGGGCG TGCCCCGCGCGTGCCATCATTTCTAGTTTTGACCCCCCCCTGGACCGGCG CGACCCCCTTAGTACGACCCTTCCTGCCGCCTCCGCTGCGGCTGTGTGTC TACTTTCGTGCCTTTGCCGTGAGGTGTCACCCGATGGGGGCACCGTGGCT TCGGGGAGCTGGACCTGCCTGGTGAAGCTGTGGGACATCGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10931:2710..6451+

>mRNA_L-elsbetiae_contig10931.846.1 ID=mRNA_L-elsbetiae_contig10931.846.1|Name=mRNA_L-elsbetiae_contig10931.846.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig10931:2710..6451+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGACCTCTCGGAGGAGAGCAAGGAGGCGCAGCAGGAGCACGCTCGGCT
ACTCAGGCAGGTGGAGTCGGAGCGGCGAGCCAGGACCATGGTGGTGCCCA
CCAAGACCGAGGACGTGGCCAGCAAGCTCAGGTATATGGACCTCTCGGAG
GAGAGCAAGGAGGCGCAGCAGGAGCACGCTCGGCTACTCAGGCAGGTGGA
GTCGGAGCGGCGAGCCAGGACCATGGTGGTGCCCACCAAGACCGAGGACG
TGGCCAGCAAGCTCAGGTATCTAGGTCAACCGGTTCGGCTCTTCTCGGAG
AACGTCGCCGACATCAGGGAGCGTCTTCGGAGATTCATCGCCGCGCTAGG
TCAACCGGTTCGGCTCTTCTCGGAGAACGTCGCCGACATCAGGGAGCGTC
TTCGGAGATTCATCGCCGCGTCCGAGATGGAGGATGAGGAGACAGAGAAG
ATCCAGGGCATGGTAGCCCCCAAGCCATCCTTCGTGCCCAGGAGGATGCA
GATGGGAGGCGAGGCGGCGGCAGGGGCAGGGGCAGGGGCAGGGGCCGGGG
CGGCGGGCGCCGTCGCCCCTGCAGGAGCGGCGCCACCGGCGGCGAAGAAA
GCGGAGGTGGTTTATACCCCTGCCTCCGACGCTCTCCTCGAGTCCGAGAT
GGAGGATGAGGAGACAGAGAAGATCCAGGGCATGGTAGCCCCCAAGCCAT
CCTTCGTGCCCAGGAGGATGCAGATGGGAGGCGAGGCGGCGGCAGGGGCA
GGGGCAGGGGCAGGGGCCGGGGCGGCGGGCGCCGTCGCCCCTGCAGGAGC
GGCGCCACCGGCGGCGAAGAAAGCGGAGGTGGTTTATACCCCTGCCTCCG
ACGCTCTCCTCGAGGCAAGAGCGGCTATCGCGACGATGTCGTTCGCGCGA
GCCAAGGGCCGGCTGGCGGGGGCGAAGCGGCGCCGCGGGGCCCCCGAGGA
GGCGTTGGCGTTGGACCGCCAGGCCGGCGAGACACTTTCGACGATGAAGA
ACCTGGCCATCAACTCGAGTCAGTTCGCTGACGACCGTCCTCTCTCGGCT
ATACAGGCAAGAGCGGCTATCGCGACGATGTCGTTCGCGCGAGCCAAGGG
CCGGCTGGCGGGGGCGAAGCGGCGCCGCGGGGCCCCCGAGGAGGCGTTGG
CGTTGGACCGCCAGGCCGGCGAGACACTTTCGACGATGAAGAACCTGGCC
ATCAACTCGAGTCAGTTCGCTGACGACCGTCCTCTCTCGGCTATACAGGT
GTCACCCGATGGGGGCACCGTGGCTTCGGGGAGCTGGACCTGCCTGGTGA
AGCTGTGGGACATCGAGGTGTCACCCGATGGGGGCACCGTGGCTTCGGGG
AGCTGGACCTGCCTGGTGAAGCTGTGGGACATCGAG
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