prot_L-elsbetiae_contig10931.846.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10931.846.1
Unique Name	prot_L-elsbetiae_contig10931.846.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	231

Homology

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BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 2.200e-112
Identity = 198/231 (85.71%), Postives = 205/231 (88.74%), Query Frame = 0

Query:    1 MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPASDALLEARAAIATMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 231
            MDLSEESKEAQQEHARLL+QVE++RRARTMVVPTKTEDVA KLR LGQPVRLFSENVADIRERLRRFIAASEMEDEE EKI+GMVAPKPSFVPR+MQMGGE AAG  XXXXX            PPAAKK EVVYTPASDALLEARAAIATMSF RAK RLAGAKRRRG PEE  A+DR+A ET STMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE
Sbjct:   75 MDLSEESKEAQQEHARLLKQVEADRRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAAXXXXX------------PPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 293

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BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A835YL38_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL38_9STRA)

HSP 1 Score: 149 bits (375), Expect = 3.800e-38
Identity = 103/233 (44.21%), Postives = 135/233 (57.94%), Query Frame = 0

Query:    1 MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAK--KAEVVYTPASDALLEARAAIATMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 231
            M+LS  S+E Q +HA +LR+VE+ RRARTM VPT  E+VA  LR LGQP+RLFSE +AD+RERLR  +A  +++ E    +  ++A                                 PA AA  A +  KAEVVYT A+  L+EAR  IA+ SFA A  RLA AKRRR     A A D  A    + +K L IN S   D+RPLSA++VSPDG  VAS +W+ + KLW+++
Sbjct:   52 MELSAASREEQDKHAEMLRKVEAHRRARTMAVPTLPEEVARALRRLGQPIRLFSETLADVRERLREHLAQLQLDGEGDAAVASLLAA------------------------------AEPAKAAAAAVEEGKAEVVYTVAAAPLIEAREVIASYSFAAAPQRLARAKRRRLDSAVASAEDAAAAAACTRLKGLVINVSAVGDERPLSAVRVSPDGSLVASAAWSGVAKLWNMK 254

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BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: M4B2G3_HYAAE (SFM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2G3_HYAAE)

HSP 1 Score: 112 bits (279), Expect = 7.540e-25
Identity = 83/232 (35.78%), Postives = 126/232 (54.31%), Query Frame = 0

Query:    1 MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTP-ASDALLEARAAIATMSFARAKGRLAGAKRRRG--APEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 229
            ++LSE S+ AQ++HA+LLR+VE+E+RAR + VPT  E+V  KLR LG+P+ LF E  AD RERLR  ++  ++E EE   ++ +              G E AAG                      A ++++ Y P  ++ + + RA I   + +    RL   ++ R   A E A  +D+ A    S  + +A  +SQ  D RP+SA++ S DGG VA+GSW+ LVK+WD
Sbjct:   54 LELSESSRAAQEKHAQLLRRVEAEKRARNVAVPTVVEEVIRKLRQLGEPITLFGERPADRRERLREILSRLDVEAEENGYVRQVFGDIEKQEIAADAAGDERAAGAGETATGKLSR-----------AHESQLFYVPLTNEKMKKVRATIFAHASSATGARLKRERQERSMSAEERARTVDQYAAGLYSAAQKMANVASQNGDVRPISAVRFSADGGHVATGSWSSLVKVWD 274

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BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: W4FW08_9STRA (SFM domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FW08_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.320e-19
Identity = 76/232 (32.76%), Postives = 115/232 (49.57%), Query Frame = 0

Query:    1 MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPA-SDALLEARAAIATMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 231
            ++LS  S+ AQ++HA LLR +E+E+R+R + VPT+ E+V  +LR LG P+ LF E   D R RLR  +++          + G++   P  V R   +   ++ G                          ++ Y P  S+ L  AR A+   S  R   RL     R         LD  A +   T +++A+N+SQ AD RPLSA++ SPD   +A+GSW+  VKLWD +
Sbjct:   46 LELSASSRNAQEKHAELLRSLETEKRSRAVNVPTRPEEVIRQLRSLGHPITLFGERPEDRRARLRTVLSSL--------AVDGVL---PQAVSRAQDI--SSSVGYEKEKKVPLED---------------QLFYVPVKSNDLKHARQALFNYSMVRTNARLQ--HERAQQDSSVFELDAHAADLYRTSQHIAVNASQLADVRPLSAVRFSPDASMLATGSWSSSVKLWDSK 247

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BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A7S4W041_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W041_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.710e-17
Identity = 94/252 (37.30%), Postives = 127/252 (50.40%), Query Frame = 0

Query:    1 MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPASDALLEARAAIATMSFARAKGRLAGAKRRRG-----------------------APEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 229
            MDLS ES + +QEH +LL  +E+++RA  M VPT   DV   LR LGQPVRLF EN+A++R+RLR  +A  E+  E      G V    +FV       G+  A    XXXXXXXXX           ++    YT A  +L+EAR  I   S   AK RL   +RRR                        A +E   LD Q      +++++A+  SQ+ D RPLSA+  S  G  VA+G W+  ++LWD
Sbjct:   12 MDLSTESLQRRQEHEQLLLNLEAKKRAFAMDVPTLPNDVKHALRELGQPVRLFGENLANVRDRLRMVLAKIEVMKE------GGVFVDSAFV-------GDIGAVVPPXXXXXXXXXXXEG-------EEEVTKYTHAPPSLIEARKEITIYSLQNAKQRLERERRRRAGAAQRVSHRTSNNKRARTTYEEQASKELDDLDDQCLLLYKSIRSMALEGSQYGDARPLSAVCTS--GNIVATGGWSGTIQLWD 241

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BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A6V2LMZ7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2LMZ7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 9.390e-17
Identity = 94/252 (37.30%), Postives = 127/252 (50.40%), Query Frame = 0

Query:    1 MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPASDALLEARAAIATMSFARAKGRLAGAKRRRG-----------------------APEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 229
            MDLS ES + +QEH +LL  +E+++RA  M VPT   DV   LR LGQPVRLF EN+A++R+RLR  +A  E+  E      G V    +FV       G+  A    XXXXXXXXX           ++    YT A  +L+EAR  I   S   AK RL   +RRR                        A +E   LD Q      +++++A+  SQ+ D RPLSA+  S  G  VA+G W+  ++LWD
Sbjct:   12 MDLSTESLQRRQEHEQLLLNLEAKKRAFAMDVPTLPNDVKHALRELGQPVRLFGENLANVRDRLRMVLAKIEVMKE------GGVFVDSAFV-------GDIGAVVPPXXXXXXXXXXXEG-------EEEVTKYTHAPPSLIEARKEITIYSLQNAKQRLERERRRRAGAAQRVSHRTSNNKRARTTYEEQASKELDDLDDQCLLLYKSIRSMALEGSQYGDARPLSAVCTS--GNIVATGGWSGTIQLWD 241

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BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: T0QUF2_SAPDV (SFM domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QUF2_SAPDV)

HSP 1 Score: 86.7 bits (213), Expect = 5.480e-16
Identity = 74/232 (31.90%), Postives = 115/232 (49.57%), Query Frame = 0

Query:    1 MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPA-SDALLEARAAIATMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 231
            ++LSE S+ AQ++HA  LR++E+ERRAR + VPT+TE+V  +LR LG+P+ LF E   D R RLR  + A ++  +    +  +VA          Q    AAA             V           + ++ Y P  ++ L  AR A+   S      RL   + R          D+ A +     +  ++N+SQ AD RPLS ++ SPD   +A+GSW+  VK+W+ +
Sbjct:   45 LELSETSRLAQEKHAEQLRRLETERRARLIQVPTRTEEVIQQLRSLGEPITLFGEKPEDRRARLRDLLGALQLAGD----VDMIVAA---------QAKANAAASELVGYEKEKKVAV-----------EDQLFYVPLKTNDLKVARHAMFKHSMVSTSARLQ--QERAQMEGTVFDADKHAAQLYREAQETSLNASQLADVRPLSHVKFSPDASLLATGSWSSNVKIWNSK 250

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BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: B8BQI8_THAPS (Small nuclear ribonucleoprotein prp4 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQI8_THAPS)

HSP 1 Score: 85.9 bits (211), Expect = 9.150e-16
Identity = 76/230 (33.04%), Postives = 112/230 (48.70%), Query Frame = 0

Query:    1 MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEVVYTPASDALLEARAAIATMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPD-GGTVASGSWTCLVKLWD 229
            + L+ +S  AQ EH  +L  +E+ +RA TM VPT   DV   LR LG+PVR+F E++A IR+RLR  +A +E+  EE  +  GM+        R M    E                           +  E  YT AS  L+ AR  I   S  R++ RL   +RR  +  + L  D    +   T++NLA+  SQ+ D RPLSA+  +      +A+G W+  +KLW+
Sbjct:    3 LTLTADSLAAQNEHRSMLLDLEARKRASTMDVPTLPADVRDALRSLGEPVRMFGEDLAAIRDRLRMVLARAEVMREE--EAGGMIVQGMEDQMRVMDAAEEE--------------------------EVTETTYTHASVELIHARKVICDFSLERSRHRLDVERRRHSSLVKQL--DDSCEKIYKTIRNLALEGSQYGDVRPLSAVYGAMRLPKLIATGGWSGGIKLWN 202

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BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A2T9ZEK6_9FUNG (SFM domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZEK6_9FUNG)

HSP 1 Score: 85.9 bits (211), Expect = 9.600e-16
Identity = 80/231 (34.63%), Postives = 111/231 (48.05%), Query Frame = 0

Query:    6 ESKEAQQEHARLLRQVESERR--ARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGGEAAAGXXXXXXXXXXXXVAPAGAAPPAAKKAEV----VYTPASDALLEARAAIATMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDI 230
            ES+E Q E  +LL + E ERR  AR M VPT    V  KLR LG+P+ LF E   D R+RLR F+ +   +  E E  QG+             +GG                   PA    P ++K E      YT  +  LLEAR  IA  S   AK R+  +K     P   +   R+         N ++++S+FAD RP+S ++ SP+  T+AS SW+ L+KLWD+
Sbjct:   42 ESQEFQSEENKLLLK-EFERREIARKMAVPTDDLKVKLKLRELGEPICLFGEGPGDRRDRLR-FLMSKAAQSTEIETEQGL-------------LGGP--------------FDTKPASEQEPESQKEEAQTEEFYTEGTPHLLEARKKIAIFSLQMAKQRIKSSKLEMEIPLTIVRKQRK--NFCEYYSNFSLSASEFADQRPISKVKFSPNSSTIASASWSGLIKLWDV 241

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BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Match: A0A7S2CK27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CK27_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.810e-15
Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 0

Query:    1 MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPVRLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSF 91
            MDLS  S   Q  HA LL++VE+ERRAR +VVPT +++V  KLR LGQPVR+F E +A++RERLR  +A  E+E E+  K+ G +A +P F
Sbjct:   74 MDLSSTSILEQDRHAALLKRVEAERRARAIVVPTNSDEVKKKLRALGQPVRIFGEGLAEVRERLRELLARIEIEGED--KVAGSIA-RPLF 161

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10931.846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LGI0_ECTSI	2.200e-112	85.71	SFM domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A835YL38_9STRA	3.800e-38	44.21	Quinon protein alcohol dehydrogenase-like superfam...	[more]
M4B2G3_HYAAE	7.540e-25	35.78	SFM domain-containing protein n=1 Tax=Hyaloperonos...	[more]
W4FW08_9STRA	1.320e-19	32.76	SFM domain-containing protein n=7 Tax=Aphanomyces ...	[more]
A0A7S4W041_9STRA	6.710e-17	37.30	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A6V2LMZ7_9STRA	9.390e-17	37.30	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
T0QUF2_SAPDV	5.480e-16	31.90	SFM domain-containing protein n=2 Tax=Saprolegnia ...	[more]
B8BQI8_THAPS	9.150e-16	33.04	Small nuclear ribonucleoprotein prp4 (Fragment) n=...	[more]
A0A2T9ZEK6_9FUNG	9.600e-16	34.63	SFM domain-containing protein n=1 Tax=Smittium meg...	[more]
A0A7S2CK27_9STRA	2.810e-15	52.75	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 7..27
None	No IPR available	PANTHER	PTHR19846:SF0	U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP4	coord: 1..230
None	No IPR available	PANTHER	PTHR19846	WD40 REPEAT PROTEIN	coord: 1..230
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 136..231 e-value: 3.0E-6 score: 28.4
IPR036285	PRP4-like superfamily	GENE3D	1.10.720.150		coord: 4..86 e-value: 2.1E-7 score: 32.2
IPR036285	PRP4-like superfamily	SUPERFAMILY	158230	PRP4-like	coord: 17..72
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 41..66 e-value: 2.7E-9 score: 36.4
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 197..231 score: 9.731
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 197..231 score: 9.974
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 176..231

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10931	contig	L-elsbetiae_contig10931:2719..6451 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10931.846.1	mRNA_L-elsbetiae_contig10931.846.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10931 2710..6451 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10931.846.1 ID=prot_L-elsbetiae_contig10931.846.1|Name=mRNA_L-elsbetiae_contig10931.846.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
MDLSEESKEAQQEHARLLRQVESERRARTMVVPTKTEDVASKLRYLGQPV
RLFSENVADIRERLRRFIAASEMEDEETEKIQGMVAPKPSFVPRRMQMGG
EAAAGAGAGAGAGAAGAVAPAGAAPPAAKKAEVVYTPASDALLEARAAIA
TMSFARAKGRLAGAKRRRGAPEEALALDRQAGETLSTMKNLAINSSQFAD
DRPLSAIQVSPDGGTVASGSWTCLVKLWDIE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR036285	PRP4-like_sf
IPR014906	PRP4-like
IPR017986	WD40_repeat_dom
IPR001680	WD40_repeat
IPR011047	Quinoprotein_ADH-like_supfam