mRNA_L-elsbetiae_contig10923.839.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: D8LGC2_ECTSI (Lon protease homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC2_ECTSI) HSP 1 Score: 422 bits (1086), Expect = 6.810e-137 Identity = 220/254 (86.61%), Postives = 238/254 (93.70%), Query Frame = 1 Query: 1 TSEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEVFIYVQG 762 +SEGDEVAALE ++ AAGLP EAS+VA RDL+RLKRMQASQPEYTVIR YLETVSELPWNR+SEETYDIRRAQ QLDKDH+GL+KVKQRIVEYIAVRSLLS S+ GS+LCLVGPPGVGKTSLGRSIA ALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGG++R LRRAGTRNPV+LLDEVDKIGSN+RGGDPSAALLEVLDPEQN SFTDHY+NVPFDLSSVLFVATANK+D IPEPLLDRLEV I++ G Sbjct: 309 SSEGDEVAALEAKIEAAGLPPEASKVAKRDLSRLKRMQASQPEYTVIRTYLETVSELPWNRVSEETYDIRRAQRQLDKDHYGLNKVKQRIVEYIAVRSLLSDSK---GSILCLVGPPGVGKTSLGRSIAAALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGTRNPVMLLDEVDKIGSNVRGGDPSAALLEVLDPEQNDSFTDHYVNVPFDLSSVLFVATANKVDAIPEPLLDRLEV-IHIPG 558
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: W7TV02_9STRA (Atp-dependent protease la n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV02_9STRA) HSP 1 Score: 321 bits (822), Expect = 3.320e-105 Identity = 166/264 (62.88%), Postives = 205/264 (77.65%), Query Frame = 1 Query: 4 SEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPW-----------------NRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744 SE D++ L RL A LP E A ++L RLKRMQ SQPE++V+R YLE + +LPW + + E +D+R + QLD+DHHGL KVK+RI+EYIAVRSL + S G +LCLVGPPGVGKTSLGRSIATAL R+FQRLSLGGVHDEAEIRGHRRTYIGA+PG +++ +++AGT +P+ LLDEVDK+GS+IRGGDPSAA+LEVLDPEQN++FTDHYLN+P+DLS V F+ATAN+ DTIPEPLLDR+EV Sbjct: 150 SEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSL---TRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEV 410
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A4D9CQU2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQU2_9STRA) HSP 1 Score: 320 bits (819), Expect = 6.220e-99 Identity = 165/264 (62.50%), Postives = 205/264 (77.65%), Query Frame = 1 Query: 4 SEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPW-----------------NRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744 SE D++ L RL A LP + A ++L RLKRMQ SQPE++V+R YLE + +LPW + + E +D+R + QLD+DHHGL KVK+RI+EYIAVRSL + S G +LCLVGPPGVGKTSLGRSIATAL R+FQRLSLGGVHDEAEIRGHRRTYIGA+PG +++ +++AGT +P+ LLDEVDK+GS+IRGGDPSAA+LEVLDPEQN++FTDHYLN+P+DLS V F+ATAN+ DTIPEPLLDR+EV Sbjct: 296 SEEDDMTELANRLKAKPLPRDVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFVKDDENEAGDTDTREPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSL---TRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEV 556
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A2R5GJ38_9STRA (Lon protease homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ38_9STRA) HSP 1 Score: 318 bits (816), Expect = 1.010e-98 Identity = 160/247 (64.78%), Postives = 201/247 (81.38%), Query Frame = 1 Query: 4 SEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744 SE DE+ ALE L LPEE +VA R+L RLK+MQ SQPEY VIR YLE ++ELPW ++S++ DI A+ QLD DHH L++VK RI+E++AVRSL + + G +LCL GPPGVGKTSLG+S+A +L R+F+RL+LGGV DEAEIRGHRRTYIGA+PG +I +L++AGT NPVILLDE+DK+G ++RG DP++ALLEVLDPEQN F DHYLNVP+DLS VLF+ATAN++DTIP PLLDR+EV Sbjct: 314 SEQDEIEALEENLAGIKLPEEPRQVADRELQRLKQMQPSQPEYAVIRSYLELMAELPWGKVSKDNLDIGHARAQLDADHHALERVKNRIIEFLAVRSLKNDMK---GPILCLAGPPGVGKTSLGKSVAESLGRQFRRLALGGVRDEAEIRGHRRTYIGALPGNIITTLKKAGTENPVILLDEIDKLGRDVRG-DPASALLEVLDPEQNDKFVDHYLNVPYDLSKVLFIATANRLDTIPGPLLDRMEV 556
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A0L0HBG1_SPIPD (Lon protease homolog 2, peroxisomal n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HBG1_SPIPD) HSP 1 Score: 313 bits (803), Expect = 7.730e-98 Identity = 162/246 (65.85%), Postives = 195/246 (79.27%), Query Frame = 1 Query: 7 EGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744 E D+VA L R+ A LPEEA++ A R+L RLKRM S EY V+R YLE +SELPW + +E+ DI RA+ QLD+DH GL+KVK RI+EY+AVR L + G +LC +GPPGVGKTSLG+S+A AL RKF R+SLGGV DEAEIRGHRRTYIGA+PG +I+ LRR G NPVILLDE+DK+G + RG DPS+ALLEVLDPEQN++FTDHYLNVPFDLS+VLF+ATAN DTIP PL DR+EV Sbjct: 300 EEDDVADLTKRISEAKLPEEATKAAERELRRLKRMHPSMAEYQVVRTYLEWLSELPWEKQTEDVMDIARARSQLDEDHFGLEKVKTRILEYLAVRKL---KQDLKGPILCFLGPPGVGKTSLGKSLANALGRKFHRISLGGVRDEAEIRGHRRTYIGALPGRIIQGLRRCGVNNPVILLDEIDKLGHDARG-DPSSALLEVLDPEQNSTFTDHYLNVPFDLSNVLFIATANDADTIPGPLFDRMEV 541
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A507DWD9_9FUNG (Lon protease homolog 2, peroxisomal n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DWD9_9FUNG) HSP 1 Score: 313 bits (802), Expect = 1.060e-97 Identity = 165/246 (67.07%), Postives = 195/246 (79.27%), Query Frame = 1 Query: 7 EGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744 E DEVA L TR+ A LPEEAS+ A R++ RLKRM S EY V+R YLE +SELPW + SE+ DI RA+ QLD DH GL+KVK RI+EY+AVR L + G +LC +GPPGVGKTSLG+S+A AL RKF R+SLGGV DEAEIRGHRRTYIGA+PG +++ LRR G NPVILLDE+DK+G + RG DPS+ALLEVLDPEQN++FTDHYLNV FDLS+VLFVATAN DTIP PLLDR+EV Sbjct: 303 EEDEVADLVTRIADAKLPEEASKAAGREIRRLKRMHPSMAEYQVVRTYLEWLSELPWEKQSEDVMDIARARQQLDDDHFGLEKVKTRILEYLAVRKL---KKDLKGPILCFLGPPGVGKTSLGKSLANALGRKFHRISLGGVRDEAEIRGHRRTYIGALPGRIVQGLRRCGVNNPVILLDEIDKLGRDSRG-DPSSALLEVLDPEQNSTFTDHYLNVAFDLSNVLFVATANDGDTIPGPLLDRMEV 544
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A1Y2GWB0_9FUNG (Lon protease C-terminal proteolytic domain-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GWB0_9FUNG) HSP 1 Score: 308 bits (788), Expect = 3.620e-97 Identity = 152/244 (62.30%), Postives = 192/244 (78.69%), Query Frame = 1 Query: 13 DEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744 DE+A +E RL A LP E + A R+L +LK+MQ + EY+VIR YL+ + +LPW++ +E+ D+ RA+ QL+ DH+GL+KVK+RI+EY+AV L G +LCLVGPPGVGKTSLGRSIA AL+RKF R+SLGGV DE+EIRGHRRTY+GA+PG +I+ L++ NPV LLDE+DKIGS GDPSAA LEVLDPEQN++FTDHYLNVPFDLS VLF+ATAN +DTIP PLLDR+E+ Sbjct: 131 DELAIIENRLAEANLPPEVQKAADRELKKLKKMQPASSEYSVIRNYLDWLGDLPWSKSTEDILDVERARKQLNDDHYGLEKVKRRILEYLAVSKLQQMKGDVRGPILCLVGPPGVGKTSLGRSIAAALDRKFHRISLGGVWDESEIRGHRRTYVGALPGRIIQGLKKCEVNNPVFLLDEIDKIGSRGHHGDPSAAFLEVLDPEQNSTFTDHYLNVPFDLSKVLFIATANSLDTIPAPLLDRMEL 374
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A139AUH0_GONPJ (Lon protease homolog n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AUH0_GONPJ) HSP 1 Score: 306 bits (784), Expect = 4.300e-97 Identity = 154/244 (63.11%), Postives = 193/244 (79.10%), Query Frame = 1 Query: 13 DEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744 DE+ L R+ + LPEEA + A R++ RLKRM S EY V+R YLE +++LPWN++SE+ DI A+ QL++DH+GL+K+K RI+E++AVR L + G +LC VGPPGVGKTSLG+SIA ALNRKF R+SLGGV DEAEIRGHRRTYIGAMPG VI+ +RR GT NPV LLDE+DK+G + RG DPS+ALLEVLDPEQN++F DHY+NVPFDLS V F+ATAN+ TIP PLLDR+E+ Sbjct: 94 DEIEELVKRIKDSNLPEEADKAAQREIKRLKRMHPSMAEYQVVRSYLEWLADLPWNKVSEDRLDIDSARKQLNEDHYGLEKIKTRILEFLAVRKL---KKDMRGPILCFVGPPGVGKTSLGKSIAAALNRKFYRISLGGVRDEAEIRGHRRTYIGAMPGMVIQGMRRCGTANPVFLLDEIDKLGRDFRG-DPSSALLEVLDPEQNSTFNDHYINVPFDLSKVFFIATANEESTIPGPLLDRMEI 333
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A197JWJ6_9FUNG (Lon protease homolog n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JWJ6_9FUNG) HSP 1 Score: 310 bits (795), Expect = 6.990e-97 Identity = 154/246 (62.60%), Postives = 191/246 (77.64%), Query Frame = 1 Query: 7 EGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744 E DE+ +E RL AA LP E + A R++ RL++MQ + EY+VIR YL+ + +LPWN+ SE+ D+ RA+ QL+ DHHGL+KVK+RI+EY+AV L G +LCLVGPPGVGKTSLGRSIATA+ RKF R+SLGGV DE+EIRGHRRTY+GA+PG +I L++ NPV LLDE+DK+GS GDPSAA LEVLDPEQN +FTDHYLNVPFDLS VLF+ATAN +DTIP PLLDR+E+ Sbjct: 272 EEDEMTTIENRLTAANLPAEVQKAADREMKRLRKMQPASSEYSVIRNYLDWLGDLPWNKSSEDILDVERARKQLNDDHHGLEKVKRRILEYLAVTKLQQMKGDVKGPILCLVGPPGVGKTSLGRSIATAMGRKFHRISLGGVWDESEIRGHRRTYVGALPGLIIHGLKKCEVNNPVFLLDEIDKVGSRGHHGDPSAAFLEVLDPEQNNTFTDHYLNVPFDLSKVLFIATANSLDTIPGPLLDRMEL 517
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A1Y2G959_9FUNG (Lon protease homolog n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G959_9FUNG) HSP 1 Score: 309 bits (792), Expect = 7.280e-96 Identity = 154/247 (62.35%), Postives = 192/247 (77.73%), Query Frame = 1 Query: 4 SEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744 +E DE+ +E RL AA LP E + A R+L RLK+MQ + EY+VIR YL+ + +LPWN+ +E+ D+ RA+ QL+ DH+GLDKVK+RI+EY+AV L G +LCLVG PGVGKTSLGRSIATA+ RKF R+SLGGV DE+EIRGHRRTY+GA+PG +I L++ NPV LLDE+DK+G+ GDPSAA LEVLDPEQN++FTDHYLNVPFDLS VLF+ATAN IDTIP PLLDR+E+ Sbjct: 341 AEEDELTIIENRLNAAHLPSEVQKAADRELKRLKKMQPASSEYSVIRNYLDWLGDLPWNKATEDLLDVERARKQLNDDHYGLDKVKRRILEYLAVTKLQQMKGDVKGPILCLVGAPGVGKTSLGRSIATAMGRKFHRISLGGVWDESEIRGHRRTYVGALPGLIIHGLKKCEVNNPVFLLDEIDKVGARGHHGDPSAAFLEVLDPEQNSTFTDHYLNVPFDLSKVLFIATANSIDTIPAPLLDRMEL 587 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10923.839.1 >prot_L-elsbetiae_contig10923.839.1 ID=prot_L-elsbetiae_contig10923.839.1|Name=mRNA_L-elsbetiae_contig10923.839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=254bp TSEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYback to top mRNA from alignment at L-elsbetiae_contig10923:1552..6401+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10923.839.1 ID=mRNA_L-elsbetiae_contig10923.839.1|Name=mRNA_L-elsbetiae_contig10923.839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4850bp|location=Sequence derived from alignment at L-elsbetiae_contig10923:1552..6401+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10923:1552..6401+ >mRNA_L-elsbetiae_contig10923.839.1 ID=mRNA_L-elsbetiae_contig10923.839.1|Name=mRNA_L-elsbetiae_contig10923.839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1524bp|location=Sequence derived from alignment at L-elsbetiae_contig10923:1552..6401+ (Laminarionema elsbetiae ELsaHSoW15)back to top |