mRNA_L-elsbetiae_contig10923.839.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10923.839.1
Unique NamemRNA_L-elsbetiae_contig10923.839.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: D8LGC2_ECTSI (Lon protease homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC2_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 6.810e-137
Identity = 220/254 (86.61%), Postives = 238/254 (93.70%), Query Frame = 1
Query:    1 TSEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEVFIYVQG 762
            +SEGDEVAALE ++ AAGLP EAS+VA RDL+RLKRMQASQPEYTVIR YLETVSELPWNR+SEETYDIRRAQ QLDKDH+GL+KVKQRIVEYIAVRSLLS S+   GS+LCLVGPPGVGKTSLGRSIA ALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGG++R LRRAGTRNPV+LLDEVDKIGSN+RGGDPSAALLEVLDPEQN SFTDHY+NVPFDLSSVLFVATANK+D IPEPLLDRLEV I++ G
Sbjct:  309 SSEGDEVAALEAKIEAAGLPPEASKVAKRDLSRLKRMQASQPEYTVIRTYLETVSELPWNRVSEETYDIRRAQRQLDKDHYGLNKVKQRIVEYIAVRSLLSDSK---GSILCLVGPPGVGKTSLGRSIAAALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGTRNPVMLLDEVDKIGSNVRGGDPSAALLEVLDPEQNDSFTDHYVNVPFDLSSVLFVATANKVDAIPEPLLDRLEV-IHIPG 558          
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: W7TV02_9STRA (Atp-dependent protease la n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV02_9STRA)

HSP 1 Score: 321 bits (822), Expect = 3.320e-105
Identity = 166/264 (62.88%), Postives = 205/264 (77.65%), Query Frame = 1
Query:    4 SEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPW-----------------NRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744
            SE D++  L  RL A  LP E    A ++L RLKRMQ SQPE++V+R YLE + +LPW                 + + E  +D+R  + QLD+DHHGL KVK+RI+EYIAVRSL   + S  G +LCLVGPPGVGKTSLGRSIATAL R+FQRLSLGGVHDEAEIRGHRRTYIGA+PG +++ +++AGT +P+ LLDEVDK+GS+IRGGDPSAA+LEVLDPEQN++FTDHYLN+P+DLS V F+ATAN+ DTIPEPLLDR+EV
Sbjct:  150 SEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSL---TRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEV 410          
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A4D9CQU2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQU2_9STRA)

HSP 1 Score: 320 bits (819), Expect = 6.220e-99
Identity = 165/264 (62.50%), Postives = 205/264 (77.65%), Query Frame = 1
Query:    4 SEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPW-----------------NRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744
            SE D++  L  RL A  LP +    A ++L RLKRMQ SQPE++V+R YLE + +LPW                 + + E  +D+R  + QLD+DHHGL KVK+RI+EYIAVRSL   + S  G +LCLVGPPGVGKTSLGRSIATAL R+FQRLSLGGVHDEAEIRGHRRTYIGA+PG +++ +++AGT +P+ LLDEVDK+GS+IRGGDPSAA+LEVLDPEQN++FTDHYLN+P+DLS V F+ATAN+ DTIPEPLLDR+EV
Sbjct:  296 SEEDDMTELANRLKAKPLPRDVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFVKDDENEAGDTDTREPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSL---TRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEV 556          
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A2R5GJ38_9STRA (Lon protease homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ38_9STRA)

HSP 1 Score: 318 bits (816), Expect = 1.010e-98
Identity = 160/247 (64.78%), Postives = 201/247 (81.38%), Query Frame = 1
Query:    4 SEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744
            SE DE+ ALE  L    LPEE  +VA R+L RLK+MQ SQPEY VIR YLE ++ELPW ++S++  DI  A+ QLD DHH L++VK RI+E++AVRSL +  +   G +LCL GPPGVGKTSLG+S+A +L R+F+RL+LGGV DEAEIRGHRRTYIGA+PG +I +L++AGT NPVILLDE+DK+G ++RG DP++ALLEVLDPEQN  F DHYLNVP+DLS VLF+ATAN++DTIP PLLDR+EV
Sbjct:  314 SEQDEIEALEENLAGIKLPEEPRQVADRELQRLKQMQPSQPEYAVIRSYLELMAELPWGKVSKDNLDIGHARAQLDADHHALERVKNRIIEFLAVRSLKNDMK---GPILCLAGPPGVGKTSLGKSVAESLGRQFRRLALGGVRDEAEIRGHRRTYIGALPGNIITTLKKAGTENPVILLDEIDKLGRDVRG-DPASALLEVLDPEQNDKFVDHYLNVPYDLSKVLFIATANRLDTIPGPLLDRMEV 556          
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A0L0HBG1_SPIPD (Lon protease homolog 2, peroxisomal n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HBG1_SPIPD)

HSP 1 Score: 313 bits (803), Expect = 7.730e-98
Identity = 162/246 (65.85%), Postives = 195/246 (79.27%), Query Frame = 1
Query:    7 EGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744
            E D+VA L  R+  A LPEEA++ A R+L RLKRM  S  EY V+R YLE +SELPW + +E+  DI RA+ QLD+DH GL+KVK RI+EY+AVR L    +   G +LC +GPPGVGKTSLG+S+A AL RKF R+SLGGV DEAEIRGHRRTYIGA+PG +I+ LRR G  NPVILLDE+DK+G + RG DPS+ALLEVLDPEQN++FTDHYLNVPFDLS+VLF+ATAN  DTIP PL DR+EV
Sbjct:  300 EEDDVADLTKRISEAKLPEEATKAAERELRRLKRMHPSMAEYQVVRTYLEWLSELPWEKQTEDVMDIARARSQLDEDHFGLEKVKTRILEYLAVRKL---KQDLKGPILCFLGPPGVGKTSLGKSLANALGRKFHRISLGGVRDEAEIRGHRRTYIGALPGRIIQGLRRCGVNNPVILLDEIDKLGHDARG-DPSSALLEVLDPEQNSTFTDHYLNVPFDLSNVLFIATANDADTIPGPLFDRMEV 541          
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A507DWD9_9FUNG (Lon protease homolog 2, peroxisomal n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DWD9_9FUNG)

HSP 1 Score: 313 bits (802), Expect = 1.060e-97
Identity = 165/246 (67.07%), Postives = 195/246 (79.27%), Query Frame = 1
Query:    7 EGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744
            E DEVA L TR+  A LPEEAS+ A R++ RLKRM  S  EY V+R YLE +SELPW + SE+  DI RA+ QLD DH GL+KVK RI+EY+AVR L    +   G +LC +GPPGVGKTSLG+S+A AL RKF R+SLGGV DEAEIRGHRRTYIGA+PG +++ LRR G  NPVILLDE+DK+G + RG DPS+ALLEVLDPEQN++FTDHYLNV FDLS+VLFVATAN  DTIP PLLDR+EV
Sbjct:  303 EEDEVADLVTRIADAKLPEEASKAAGREIRRLKRMHPSMAEYQVVRTYLEWLSELPWEKQSEDVMDIARARQQLDDDHFGLEKVKTRILEYLAVRKL---KKDLKGPILCFLGPPGVGKTSLGKSLANALGRKFHRISLGGVRDEAEIRGHRRTYIGALPGRIVQGLRRCGVNNPVILLDEIDKLGRDSRG-DPSSALLEVLDPEQNSTFTDHYLNVAFDLSNVLFVATANDGDTIPGPLLDRMEV 544          
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A1Y2GWB0_9FUNG (Lon protease C-terminal proteolytic domain-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GWB0_9FUNG)

HSP 1 Score: 308 bits (788), Expect = 3.620e-97
Identity = 152/244 (62.30%), Postives = 192/244 (78.69%), Query Frame = 1
Query:   13 DEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744
            DE+A +E RL  A LP E  + A R+L +LK+MQ +  EY+VIR YL+ + +LPW++ +E+  D+ RA+ QL+ DH+GL+KVK+RI+EY+AV  L        G +LCLVGPPGVGKTSLGRSIA AL+RKF R+SLGGV DE+EIRGHRRTY+GA+PG +I+ L++    NPV LLDE+DKIGS    GDPSAA LEVLDPEQN++FTDHYLNVPFDLS VLF+ATAN +DTIP PLLDR+E+
Sbjct:  131 DELAIIENRLAEANLPPEVQKAADRELKKLKKMQPASSEYSVIRNYLDWLGDLPWSKSTEDILDVERARKQLNDDHYGLEKVKRRILEYLAVSKLQQMKGDVRGPILCLVGPPGVGKTSLGRSIAAALDRKFHRISLGGVWDESEIRGHRRTYVGALPGRIIQGLKKCEVNNPVFLLDEIDKIGSRGHHGDPSAAFLEVLDPEQNSTFTDHYLNVPFDLSKVLFIATANSLDTIPAPLLDRMEL 374          
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A139AUH0_GONPJ (Lon protease homolog n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AUH0_GONPJ)

HSP 1 Score: 306 bits (784), Expect = 4.300e-97
Identity = 154/244 (63.11%), Postives = 193/244 (79.10%), Query Frame = 1
Query:   13 DEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744
            DE+  L  R+  + LPEEA + A R++ RLKRM  S  EY V+R YLE +++LPWN++SE+  DI  A+ QL++DH+GL+K+K RI+E++AVR L    +   G +LC VGPPGVGKTSLG+SIA ALNRKF R+SLGGV DEAEIRGHRRTYIGAMPG VI+ +RR GT NPV LLDE+DK+G + RG DPS+ALLEVLDPEQN++F DHY+NVPFDLS V F+ATAN+  TIP PLLDR+E+
Sbjct:   94 DEIEELVKRIKDSNLPEEADKAAQREIKRLKRMHPSMAEYQVVRSYLEWLADLPWNKVSEDRLDIDSARKQLNEDHYGLEKIKTRILEFLAVRKL---KKDMRGPILCFVGPPGVGKTSLGKSIAAALNRKFYRISLGGVRDEAEIRGHRRTYIGAMPGMVIQGMRRCGTANPVFLLDEIDKLGRDFRG-DPSSALLEVLDPEQNSTFNDHYINVPFDLSKVFFIATANEESTIPGPLLDRMEI 333          
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A197JWJ6_9FUNG (Lon protease homolog n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JWJ6_9FUNG)

HSP 1 Score: 310 bits (795), Expect = 6.990e-97
Identity = 154/246 (62.60%), Postives = 191/246 (77.64%), Query Frame = 1
Query:    7 EGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744
            E DE+  +E RL AA LP E  + A R++ RL++MQ +  EY+VIR YL+ + +LPWN+ SE+  D+ RA+ QL+ DHHGL+KVK+RI+EY+AV  L        G +LCLVGPPGVGKTSLGRSIATA+ RKF R+SLGGV DE+EIRGHRRTY+GA+PG +I  L++    NPV LLDE+DK+GS    GDPSAA LEVLDPEQN +FTDHYLNVPFDLS VLF+ATAN +DTIP PLLDR+E+
Sbjct:  272 EEDEMTTIENRLTAANLPAEVQKAADREMKRLRKMQPASSEYSVIRNYLDWLGDLPWNKSSEDILDVERARKQLNDDHHGLEKVKRRILEYLAVTKLQQMKGDVKGPILCLVGPPGVGKTSLGRSIATAMGRKFHRISLGGVWDESEIRGHRRTYVGALPGLIIHGLKKCEVNNPVFLLDEIDKVGSRGHHGDPSAAFLEVLDPEQNNTFTDHYLNVPFDLSKVLFIATANSLDTIPGPLLDRMEL 517          
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Match: A0A1Y2G959_9FUNG (Lon protease homolog n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G959_9FUNG)

HSP 1 Score: 309 bits (792), Expect = 7.280e-96
Identity = 154/247 (62.35%), Postives = 192/247 (77.73%), Query Frame = 1
Query:    4 SEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGYLETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLLSGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAALLEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEV 744
            +E DE+  +E RL AA LP E  + A R+L RLK+MQ +  EY+VIR YL+ + +LPWN+ +E+  D+ RA+ QL+ DH+GLDKVK+RI+EY+AV  L        G +LCLVG PGVGKTSLGRSIATA+ RKF R+SLGGV DE+EIRGHRRTY+GA+PG +I  L++    NPV LLDE+DK+G+    GDPSAA LEVLDPEQN++FTDHYLNVPFDLS VLF+ATAN IDTIP PLLDR+E+
Sbjct:  341 AEEDELTIIENRLNAAHLPSEVQKAADRELKRLKKMQPASSEYSVIRNYLDWLGDLPWNKATEDLLDVERARKQLNDDHYGLDKVKRRILEYLAVTKLQQMKGDVKGPILCLVGAPGVGKTSLGRSIATAMGRKFHRISLGGVWDESEIRGHRRTYVGALPGLIIHGLKKCEVNNPVFLLDEIDKVGARGHHGDPSAAFLEVLDPEQNSTFTDHYLNVPFDLSKVLFIATANSIDTIPAPLLDRMEL 587          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10923.839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGC2_ECTSI6.810e-13786.61Lon protease homolog n=1 Tax=Ectocarpus siliculosu... [more]
W7TV02_9STRA3.320e-10562.88Atp-dependent protease la n=1 Tax=Nannochloropsis ... [more]
A0A4D9CQU2_9STRA6.220e-9962.50Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2R5GJ38_9STRA1.010e-9864.78Lon protease homolog n=1 Tax=Hondaea fermentalgian... [more]
A0A0L0HBG1_SPIPD7.730e-9865.85Lon protease homolog 2, peroxisomal n=2 Tax=Spizel... [more]
A0A507DWD9_9FUNG1.060e-9767.07Lon protease homolog 2, peroxisomal n=1 Tax=Powell... [more]
A0A1Y2GWB0_9FUNG3.620e-9762.30Lon protease C-terminal proteolytic domain-domain-... [more]
A0A139AUH0_GONPJ4.300e-9763.11Lon protease homolog n=1 Tax=Gonapodya prolifera (... [more]
A0A197JWJ6_9FUNG6.990e-9762.60Lon protease homolog n=1 Tax=Linnemannia elongata ... [more]
A0A1Y2G959_9FUNG7.280e-9662.35Lon protease homolog n=1 Tax=Lobosporangium transv... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10923contigL-elsbetiae_contig10923:1552..6401 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score427.6
Seed ortholog evalue4.2e-117
Seed eggNOG ortholog2880.D8LGC2
Preferred nameLONP2
KEGG koko:K01338,ko:K08675
KEGG Pathwayko04112,map04112
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0002020,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006139,GO:0006259,GO:0006508,GO:0006605,GO:0006625,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007005,GO:0007031,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009791,GO:0009894,GO:0009987,GO:0010033,GO:0010467,GO:0010565,GO:0014070,GO:0015031,GO:0015833,GO:0015919,GO:0016043,GO:0016485,GO:0016558,GO:0016560,GO:0016787,GO:0017038,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0019899,GO:0022622,GO:0031323,GO:0031329,GO:0031907,GO:0031974,GO:0031998,GO:0032042,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0040007,GO:0042221,GO:0042579,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043574,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045184,GO:0046320,GO:0046483,GO:0046907,GO:0048364,GO:0048527,GO:0048528,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0050994,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0055085,GO:0062012,GO:0065002,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0090304,GO:0090696,GO:0099402,GO:0140096,GO:1901360,GO:1901564
EggNOG free text desc.ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial
EggNOG OGsCOG0466@1,KOG2004@2759
EC3.4.21.53
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03029
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-06_002640.1
Exons6
Model size762
Cds size762
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10923.839.1prot_L-elsbetiae_contig10923.839.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10923 1552..6401 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815310.7953043-CDS-L-elsbetiae_contig10923:1551..16861622815310.7953043-CDS-L-elsbetiae_contig10923:1551..1686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 1552..1686 +
1691682830.5742238-CDS-L-elsbetiae_contig10923:1551..16861691682830.5742238-CDS-L-elsbetiae_contig10923:1551..1686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 1552..1686 +
1622815310.8207638-CDS-L-elsbetiae_contig10923:2027..21471622815310.8207638-CDS-L-elsbetiae_contig10923:2027..2147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 2028..2147 +
1691682830.5876596-CDS-L-elsbetiae_contig10923:2027..21471691682830.5876596-CDS-L-elsbetiae_contig10923:2027..2147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 2028..2147 +
1622815310.8467553-CDS-L-elsbetiae_contig10923:3359..35081622815310.8467553-CDS-L-elsbetiae_contig10923:3359..3508Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 3360..3508 +
1691682830.6102872-CDS-L-elsbetiae_contig10923:3359..35081691682830.6102872-CDS-L-elsbetiae_contig10923:3359..3508Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 3360..3508 +
1622815310.8632145-CDS-L-elsbetiae_contig10923:4460..45561622815310.8632145-CDS-L-elsbetiae_contig10923:4460..4556Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 4461..4556 +
1691682830.631063-CDS-L-elsbetiae_contig10923:4460..45561691682830.631063-CDS-L-elsbetiae_contig10923:4460..4556Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 4461..4556 +
1622815310.8756256-CDS-L-elsbetiae_contig10923:5750..58891622815310.8756256-CDS-L-elsbetiae_contig10923:5750..5889Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 5751..5889 +
1691682830.6401503-CDS-L-elsbetiae_contig10923:5750..58891691682830.6401503-CDS-L-elsbetiae_contig10923:5750..5889Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 5751..5889 +
1622815310.8915317-CDS-L-elsbetiae_contig10923:6278..64011622815310.8915317-CDS-L-elsbetiae_contig10923:6278..6401Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 6279..6401 +
1691682830.648841-CDS-L-elsbetiae_contig10923:6278..64011691682830.648841-CDS-L-elsbetiae_contig10923:6278..6401Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10923 6279..6401 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10923.839.1

>prot_L-elsbetiae_contig10923.839.1 ID=prot_L-elsbetiae_contig10923.839.1|Name=mRNA_L-elsbetiae_contig10923.839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=254bp
TSEGDEVAALETRLGAAGLPEEASRVALRDLARLKRMQASQPEYTVIRGY
LETVSELPWNRLSEETYDIRRAQLQLDKDHHGLDKVKQRIVEYIAVRSLL
SGSESQGGSVLCLVGPPGVGKTSLGRSIATALNRKFQRLSLGGVHDEAEI
RGHRRTYIGAMPGGVIRSLRRAGTRNPVILLDEVDKIGSNIRGGDPSAAL
LEVLDPEQNASFTDHYLNVPFDLSSVLFVATANKIDTIPEPLLDRLEVFI
YVQG
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mRNA from alignment at L-elsbetiae_contig10923:1552..6401+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10923.839.1 ID=mRNA_L-elsbetiae_contig10923.839.1|Name=mRNA_L-elsbetiae_contig10923.839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4850bp|location=Sequence derived from alignment at L-elsbetiae_contig10923:1552..6401+ (Laminarionema elsbetiae ELsaHSoW15)
ACGAGCGAGGGGGATGAGGTAGCCGCGCTCGAGACCAGGCTCGGGGCCGC CGGCCTGCCGGAGGAAGCATCCAGGGTTGCCCTGCGAGACCTGGCCAGGC TCAAGAGGATGCAGGCCTCGCAGCCGGAGTACACGGTGCGTGCTCGGTCC TCTCCTCCTCCTTCTCCTCCTTCCTGCTCCTGCTGCTGGCGTGTGTATTT ATTTGGTGTAGATTATACATGCCATGTGCTTGTTTTGTCTTGAGTACCGC TGTTGCGGCGTATTCTCGCCCTCTCTGTAGATGTGAAAGTATGCAGTAGT GCAAGGGTCTCATGCTGTACAGCAGTATTGATGTATGTATGTACACGAAC AGAAAAAGGTGCGCGGCGCATTGTGTCATCGTTGTCCCTGTACTGCTGTT GTCTGCAACTCCAATCCCCCCCCCCCCGCTTACCCACGCACCCACGGCTG CGCGCCGCTCTACGTCTTGAATGAAGGTGATTCGGGGGTACCTGGAGACG GTGTCGGAGCTGCCATGGAACCGGCTGTCCGAGGAGACGTACGACATCCG CCGGGCGCAGCTCCAGCTGGACAAGGATCACCACGGCCTCGACAAGGTAC GTACATGCGACGCGTGGTGTGTGCGTTTTTTTCCTGGCCATCCTCTCGAG GTGTTTGCTGCTGCTGCTGCCGGTGTTGCCGTTGTTGTTGCTGCTGTTGA TGTTGTTGCTGTCTTGTTGTTGTTGTTGTTGTCGTGTGTTATCTTTCTCC AAGAGCGCCCTCTTAGTTGGTTGCAGGCGCCCCCGAGTTCAGGAGCACCT TTTGTTTGCTGTCGGCTGAAAGAGAGTGGTGCATGTATATGCCGCAATCG TCTTCAAGTTCCCCCCGGGGGAAAACTCAGAGAAATCATGCTCTTCCAGG CGGAAAAGGTGATTGCGGGGGGTTTCTTGGAGACGAGTACGGTATATGCA TACCGTTGGCGGCAACGAAGCGACCCGCAAAATACATGGACTGAGGCTGC AACAAAACTGGTTCGTGCAGGCAATTAAACCGAACCAAACCAGCAAGCGC TTCCGTACGATATATCCGTGCGATACATAGGCAAGGCAAGGCAAGGCGGT TGATTCCGACGGATGAGCTACACGCAGACGCGTACCGCCTGTGCCTCTAT TTGCTTGCTATACACTTATGTATATAGCAGCTCCTTTTTGCAGCGCGACT CAAAACCAACCCCAAGCTTCTAGAAGGGAAGGGGCCGGGGCACGGTGAGA AGATGAGGGTGTGCGGGTTCGTGCGCATGTGGCGGAGCTGTTCGACCTTT TTGCTGCGATCGGAGACTTGACTTCTATTGTCGGCGCCCCATGCCTCGCC CTCAACCCCCCCCCCCCCGCCGTAGTGTTTTAGCGCACACATGCACGCGC GCGCACGCACGCACACAGCGGTCCGCAGGCTATGTGGAGCCGCCCGTCCA ATCTCTCTTCACGGCTTCCCGTGGCGGCCCCGATGGAACCAAAAGGCAAA TGACATTACTTCCGTCCTCTCGAATACACCCAGCACACGCGCCCGCCCTC GGAACGCCTTTCTGTCCGGCTTTTTCCCTCCGCGGGTCTTTTCCCTCCGC GGTCGCGTCCGTAGAGCGGCCCCGCCATTTTAGAAAGTATGTTTGTCGCT TTTTGCCCCCCCGTGGCTGACGTGCTTTCCGTTGGCCAGCAACCAACCGG TTAGGACTGTCGATGCTGACGAACAAACAAACGCACGCACTTCTCTGTAC ACGCACTCTCCACACACACACACGCGCACGCACGCACACACGTTCGCGTG TTTTTCAGGTAAAGCAGCGCATCGTGGAGTACATCGCTGTGCGGTCTCTG CTGTCGGGGTCGGAAAGCCAGGGGGGCTCCGTGCTGTGCCTCGTGGGGCC CCCAGGGGTCGGCAAGACGTCTCTGGGACGCTCGATCGCCACCGCCCTCA ACAGGAAGTGAGAACACGCCGTGTTTTGTGTGTGTGCACTTGATTGTTGC TTTGTTGGTGCGGAAAAGAGTTTAAGAGTTGACATTGTCTTTCCTGTTTC GGTTTTGTCCGTGGTTATTTATTTGTTTTGCGTGGACGGAAAGAAAGGGT GTGTGACAACAACCTCGTATTTTTTTTGCGCCCCCGTGTAACACGGCGGT AAAATGTAATAGTTGCCAAACCCGAGCGTGCTGGTGCGTGCGGCCGTACA AGTTTCGGCAGCCAGCCCTGCCCGTGGCGTTTTTTTTTTTTCGGGCATGT ACCTGTGTATTTTGGTTTGCGCGTGCGTACGTGAGAGCGCCTGTGGCCTC GACTTTGGAGTGCTAATTCCGTGCGCCGCTTCGCGTCCCCGGAGGTTGCA GCTACATGATTACCTGGGCAACCCCTTCCCACAAACCTCTTCTAGCAGCC TGTGCAGCCGCTTTCAAGCCCCTCCGTGGAGTACGAAACGACCGCCTTTC GGGCGAAGGAGGCGACATAATTCTAGCATTCTACGCACAGAACAATCCTT GCGTCTGTCTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTCTCCCTCT TTCTCTCTCTCTGTCTATCCGTTTCTGTCTGTCTCTCTCTCTGTCTCTCT CTCTCTCTCTCTCTTTATCCCTCCATCTTTCTCTCTCTCTGTCTATCCGT CTATCTCTCTCTCTCGGTCTCTCTCCCTCTCTCTCTCTTTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTTTCTATATAGATACATACTTAGTA TATATATATATATATGTCACTCTCTTGTCGGAGGAGCACCAAGACATCAA AACAGCAGTTTACACGCCATGTTTGATCCCCCCCTTCGTCTTCGTGCGGC TTTGTTTTTGTTTTGTACCCACCAAAAACGGCCGGCGGAATATGTGCACA TGCACGCAGGTTTCAACGCCTCTCCCTCGGCGGGGTTCACGACGAGGCCG AGATCAGGGGGCATCGCCGGACGTACATCGGAGCCATGCCCGGGGGGGTT ATCAGGTCCTGCCTCCTCGTGTGTTGGGCGGCGTTTTTGTTGTTTTTGCT GTTTACTCTCTCGCGTGCTGTGATGGTTGTCTTCGGGTTTCGACACCCTG TTTTTCTCCTGTTTCTGGAGTAGATAAACAACAACATTTAGTGGTTGTAC GCTCGAATCCCGAAGGTTCTGCCGCTTTGTTTGTGTGGTGTAGTCTTGTT TATTTGTTTCGCTTCACTACAATTAGGCTTTTCCTGCAGAATAGAGCCAG CCCCCAATTCTCACAAAGAGCTGTGGGGGCAACCGGGGGGGGGGGGGGGG GGGGGGGGTGTTCTTCAAAATAAATAATAACAAAATCTCCCTCAACTTCG TTCTCTTCAAATTGTGCTGCTTNNNNNNNNNNGGGGGGGGGGGGGGGGGG GTAGTCATCTAGGAAATAGAGTGAAAAATCCCCCACCGCGGTCACTTTTT CACAGTTGGGGGGCCCTGCTGCAGGAAGCCTATGCCGCAACAACAGAGAC AGACTCCAACAAAAACACCGGACTCAAAAAGCGAATATTACGTCTCTGTA TGGAATACCGTCTGAACCCCATATCGAGTCTTTGCTCTAGTATGGGTTAG GTTCCATCTTTGATTCTTTGTTTTATTTTAAAAAGCGACCACAGGGCAGA GAGCGGCCGTCAAAGGGTCCTTCGCCGGTCCGGTCCGCCTTGTGCGTCCT TGCCCCTGTGCTCCTCTACATCTACATAGCCAGCCGACGCAGCGACGACT GGGCACCGATACCGCTGTGGCCGGCCTGGGGCGTGCTGCCCTCTCCGAGC GAACTCTTGTTTACTTCGAAGTAGGCTCCCGTTTATTTCTCCCCCCTACA GAGAGCGCTATTTACCCAAAAAAGCACTCATGGTACAATACAAGCCCTTT GTTTTGCGAAAAAATTACTCGTTCAGCAAAGCACCAGTCCGTTCGCTCTG CCTTGCCCCTTTCGTTCGACACGGGCAGCAATGCTCAAAGCAGTTGCCCC CCCTGGTGCCTCTTGTTTGTTGCTGCTGCGGCTGCTGCGGCTGCTGCTGC GGCTGCTGCTGCGGCTGCGGCTGCTGCTGCGGCTGCGGCTGCTGCTGCGG CTGCTGCTGCGGCTGCTGCTACGGCTGCTGCTGCTGCTGCTGCTGCTACT GACGATGCCATTGCCGCCCCGTCCCGTCCCGTGTGTCTGCTGCGTCCAGA TCCCTCCGCCGCGCGGGCACCCGCAACCCGGTCATACTCCTCGACGAGGT GGACAAGATCGGCTCCAACATCCGGGGCGGGGACCCCTCGGCGGCGCTCC TGGAGGTGCTGGACCCGGAGCAGAACGCCTCGTTCACGGTGAATACATAA ATACACACGAAATATCATACAATATCATATGATACATACATACCCCTTAC GTGTCCGTGCTCGTGGCAGGAAGGTAGCCGCGCACTTTACTGCCGTCATC GTATGTATGTGGTCACAGCGCGTGTGTTGTTTGTCGCCCCCGGCGGGCGG GGTTTATCGTGTATGTATTAAATTCCCGTTCTTGACGAGTGTTTTCTCGC CGCAACTGGGGGAAAGGGGCGACGGAACCCGGGGAAGGGGGGAAGGGGTA GGGTTACTTCCCGGACCGAGCCCCTAAGATGAACGTCCTCTCAAAACCCC GCGCCTGCCTGTGTTGACGCCCCGTTTCGCGTGTTGCTTTCTTTTCGCCG CCGTTTTTGCCTTAATACATCCCGAAGGACCACTACCTCAACGTCCCGTT TGACCTGTCGTCGGTGCTGTTCGTGGCCACGGCGAACAAGATCGACACCA TCCCCGAGCCGCTGCTGGACCGCTTGGAGGTATTTATTTATGTACAAGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10923:1552..6401+

>mRNA_L-elsbetiae_contig10923.839.1 ID=mRNA_L-elsbetiae_contig10923.839.1|Name=mRNA_L-elsbetiae_contig10923.839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1524bp|location=Sequence derived from alignment at L-elsbetiae_contig10923:1552..6401+ (Laminarionema elsbetiae ELsaHSoW15)
ACGAGCGAGGGGGATGAGGTAGCCGCGCTCGAGACCAGGCTCGGGGCCGC
CGGCCTGCCGGAGGAAGCATCCAGGGTTGCCCTGCGAGACCTGGCCAGGC
TCAAGAGGATGCAGGCCTCGCAGCCGGAGTACACGACGAGCGAGGGGGAT
GAGGTAGCCGCGCTCGAGACCAGGCTCGGGGCCGCCGGCCTGCCGGAGGA
AGCATCCAGGGTTGCCCTGCGAGACCTGGCCAGGCTCAAGAGGATGCAGG
CCTCGCAGCCGGAGTACACGGTGATTCGGGGGTACCTGGAGACGGTGTCG
GAGCTGCCATGGAACCGGCTGTCCGAGGAGACGTACGACATCCGCCGGGC
GCAGCTCCAGCTGGACAAGGATCACCACGGCCTCGACAAGGTGATTCGGG
GGTACCTGGAGACGGTGTCGGAGCTGCCATGGAACCGGCTGTCCGAGGAG
ACGTACGACATCCGCCGGGCGCAGCTCCAGCTGGACAAGGATCACCACGG
CCTCGACAAGGTAAAGCAGCGCATCGTGGAGTACATCGCTGTGCGGTCTC
TGCTGTCGGGGTCGGAAAGCCAGGGGGGCTCCGTGCTGTGCCTCGTGGGG
CCCCCAGGGGTCGGCAAGACGTCTCTGGGACGCTCGATCGCCACCGCCCT
CAACAGGAAGTAAAGCAGCGCATCGTGGAGTACATCGCTGTGCGGTCTCT
GCTGTCGGGGTCGGAAAGCCAGGGGGGCTCCGTGCTGTGCCTCGTGGGGC
CCCCAGGGGTCGGCAAGACGTCTCTGGGACGCTCGATCGCCACCGCCCTC
AACAGGAAGTTTCAACGCCTCTCCCTCGGCGGGGTTCACGACGAGGCCGA
GATCAGGGGGCATCGCCGGACGTACATCGGAGCCATGCCCGGGGGGGTTA
TCAGGTTTCAACGCCTCTCCCTCGGCGGGGTTCACGACGAGGCCGAGATC
AGGGGGCATCGCCGGACGTACATCGGAGCCATGCCCGGGGGGGTTATCAG
ATCCCTCCGCCGCGCGGGCACCCGCAACCCGGTCATACTCCTCGACGAGG
TGGACAAGATCGGCTCCAACATCCGGGGCGGGGACCCCTCGGCGGCGCTC
CTGGAGGTGCTGGACCCGGAGCAGAACGCCTCGTTCACGATCCCTCCGCC
GCGCGGGCACCCGCAACCCGGTCATACTCCTCGACGAGGTGGACAAGATC
GGCTCCAACATCCGGGGCGGGGACCCCTCGGCGGCGCTCCTGGAGGTGCT
GGACCCGGAGCAGAACGCCTCGTTCACGGACCACTACCTCAACGTCCCGT
TTGACCTGTCGTCGGTGCTGTTCGTGGCCACGGCGAACAAGATCGACACC
ATCCCCGAGCCGCTGCTGGACCGCTTGGAGGTATTTATTTATGTACAAGG
CGACCACTACCTCAACGTCCCGTTTGACCTGTCGTCGGTGCTGTTCGTGG
CCACGGCGAACAAGATCGACACCATCCCCGAGCCGCTGCTGGACCGCTTG
GAGGTATTTATTTATGTACAAGGC
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