mRNA_L-elsbetiae_contig10729.682.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: A0A6H5L7H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7H8_9PHAE) HSP 1 Score: 283 bits (724), Expect = 2.430e-88 Identity = 177/300 (59.00%), Postives = 200/300 (66.67%), Query Frame = 1 Query: 1 ADPAPPSSPVVRVLACGGTYIPSPPKPMLRSVDVETKPTADAVVEXXXXXXXXXXXXXXXXSNLCA---GRSEYXXXXX--------------------REAAKESGMMTCVAVSAAGARGRGILVTGSYDKGVRVLHNVLSSDRDDGNQXXXXXXXXXXXXXXXXXXXXXXXXVTMRLLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKF----EAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLSLVVYARRMGLNRLRALWTAGRLRRARQRRS 819 + PAP VVR+LACGGT++P+P KPMLR VDV T A A S+LCA GRSE X A KE+G+MTCVA+SAAGARGRGILVTGSYDKGVRVLHNVL DR++ XXXXXXX VTMR+LGRH++GVRAVAISADGRW V+GDR+G +KVWEVP+EAPPG P EAEFEAHKGYVY+LCMSPDART+VSGGSD+AFRVWDLSL+VYARRM LNRLRALWTA RLRRAR +RS Sbjct: 218 SSPAPVVPSVVRILACGGTFLPAPAKPMLRRVDVRT--AAAAARADQAGGEEADVVSRPARSDLCAAAAGRSERNGENXXXXXXXXXXXXXXXDARGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVLCPDREN-------------PPSSSXXXXXXXPPVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGIVKVWEVPREAPPGADREPLSSDGAAEAEFEAHKGYVYSLCMSPDARTVVSGGSDKAFRVWDLSLIVYARRMSLNRLRALWTADRLRRARLKRS 502
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: D8LF89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF89_ECTSI) HSP 1 Score: 216 bits (549), Expect = 1.450e-65 Identity = 145/252 (57.54%), Postives = 165/252 (65.48%), Query Frame = 1 Query: 1 ADPAPPSSPVVRVLACGGTYIPSPPKPMLRSVDVETKPTADAVVEXXXXXXXXXXXXXXXXSNLCA---GRSE-----------------YXXXXXREAAKESGMMTCVAVSAAGARGRGILVTGSYDKGVRVLHNVLSSDRDDGNQXXXXXXXXXXXXXXXXXXXXXXXXVTMRLLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCK----FEAEFEAHKGYVYALCMSPDARTL 684 + PAP PVVR+LACGGT++P+P KPMLR VDV T A A + S+LCA GRSE X A KE+G+MTCVA+SAAGARGRGILVTGSYDKGVRVLHNVL DR++ XXXXXXXXXXXXXVTMR+LGRH++GVRAVAISADGRW V+GDR+G +KVWEVP+E PPG P EAEFEAHKGYVY+LCMSPDARTL Sbjct: 21 SSPAPVVPPVVRILACGGTFLPAPAKPMLRRVDVRTAAPAGAGADQAGGEEADVVSRPVR-SDLCAAAAGRSERDGENXXXXXXXXXXXXXXRGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVLCPDREN------------PPXXXXXXXXXXXXXVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGLVKVWEVPRETPPGADREPSSPDGAAEAEFEAHKGYVYSLCMSPDARTL 259
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: A0A2E8D5D7_9PLAN (Cytochrome c domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D5D7_9PLAN) HSP 1 Score: 62.4 bits (150), Expect = 3.570e-7 Identity = 28/80 (35.00%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 490 VRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLS 729 V+A+A+SADG+W G+ G+++++E+P K EAH G + S D+ LVSGG D+ F+VW+++ Sbjct: 253 VKALAVSADGKWAAMGEESGKVRLYELPSG----------KLVRTLEAHAGAASGVAFSTDSTKLVSGGQDKKFKVWNVA 322
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: UPI001B87190F (uncharacterized protein n=1 Tax=Suillus bovinus TaxID=48563 RepID=UPI001B87190F) HSP 1 Score: 57.4 bits (137), Expect = 1.600e-5 Identity = 41/144 (28.47%), Postives = 62/144 (43.06%), Query Frame = 1 Query: 292 GRGILVTGSYDKGVRVLHNVLSSDRDDGNQXXXXXXXXXXXXXXXXXXXXXXXXVTMRLLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWD 723 GRG +VT SYDK +R L N+ +DG V ++++ H G+R +A+S DG W+VSGD GR+ W E+ + H + +L SPD+ +L SG D +W+ Sbjct: 33 GRGRMVTASYDKKLR-LWNL-----EDG--------------------------VVLKIMEGHTFGIRELAVSKDGEWIVSGDDGGRIIAWNKDGES----------LTQPIKVHSKQIGSLDFSPDSTSLASGSWDTTVELWN 134
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: A0A3M1LBA9_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1LBA9_9CHLR) HSP 1 Score: 52.8 bits (125), Expect = 1.970e-5 Identity = 31/81 (38.27%), Postives = 42/81 (51.85%), Query Frame = 1 Query: 478 HKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVW 720 H D VRAVA+S DGRW+VSG R+ ++ W+ P + P F + + +L +SPD R L G D RVW Sbjct: 4 HTDWVRAVAVSPDGRWIVSGSRDRTVRAWD------PASGTPRVLFWNDAP-----ILSLALSPDGRLLACG--DEVGRVW 71
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: A0A3L7MRL9_9BACT (WD40 repeat domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7MRL9_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 3.490e-5 Identity = 33/88 (37.50%), Postives = 43/88 (48.86%), Query Frame = 1 Query: 466 LLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLS 729 +L H + A+AIS DG+ SGDR G++ VW+ G P K E AH+G V +L SPD L S G D + W S Sbjct: 191 ILKGHTKAISALAISKDGKKAASGDRAGKILVWDW------GAKNPSSK---EITAHQGGVDSLSFSPDTDQLASAGRDALVKTWSTS 269
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: A0A354GQ39_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354GQ39_9BACT) HSP 1 Score: 54.7 bits (130), Expect = 8.540e-5 Identity = 30/82 (36.59%), Postives = 48/82 (58.54%), Query Frame = 1 Query: 490 VRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYA--PPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLS 729 + +A SADG+ V+SG + LK+W+ A + P +FE + H V+ SPD +++VSGGSDR+ +VW+L+ Sbjct: 251 IYCIAWSADGKQVLSGSLDTSLKLWDATTGALVREFHGYKPKEFE---KGHHDGVFTAVFSPDGKSMVSGGSDRSIKVWNLA 329
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: F0YKK8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKK8_AURAN) HSP 1 Score: 54.7 bits (130), Expect = 8.560e-5 Identity = 31/87 (35.63%), Postives = 45/87 (51.72%), Query Frame = 1 Query: 460 MRLLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVW 720 +R+L H VR +A GR + + + +KVW+VP + +AH G+V AL + DA+TLVSGG DR R+W Sbjct: 358 LRVLAAHGSWVRCLAWHPCGRRLSTASDDRSIKVWDVPDGRVVASLD---------DAHAGFVAALALCGDAKTLVSGGDDRLVRLW 435
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: UPI00029F6284 (hypothetical protein n=1 Tax=Agaricus bisporus var. bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389) TaxID=936046 RepID=UPI00029F6284) HSP 1 Score: 54.3 bits (129), Expect = 8.710e-5 Identity = 28/86 (32.56%), Postives = 42/86 (48.84%), Query Frame = 1 Query: 478 HKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLSLV 735 HKD V +VA+S DGRWVVSG ++ ++ W+ + + HK V ++ +SP L +G D R+W S V Sbjct: 244 HKDYVLSVAVSHDGRWVVSGSKDRGVQFWDAKNAV----------VQCMLQGHKNSVNSIDLSPAGSILATGSGDWLARIWSYSSV 319
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: K9EL28_9CYAN (WD40 repeat-containing protein n=1 Tax=Leptolyngbya sp. PCC 7375 TaxID=102129 RepID=K9EL28_9CYAN) HSP 1 Score: 55.1 bits (131), Expect = 8.950e-5 Identity = 26/84 (30.95%), Postives = 40/84 (47.62%), Query Frame = 1 Query: 478 HKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLS 729 H V +VA S DG+W+V+GD+ G +++WE+ P FE H + L P L+SG D +WD++ Sbjct: 738 HPSEVWSVAFSHDGKWIVTGDKAGLIRMWEIQDLTEPSMI---------FEGHAHGIRTLAFVPTDEALISGSMDTTIWIWDVN 812 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10729.682.1 >prot_L-elsbetiae_contig10729.682.1 ID=prot_L-elsbetiae_contig10729.682.1|Name=mRNA_L-elsbetiae_contig10729.682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp ADPAPPSSPVVRVLACGGTYIPSPPKPMLRSVDVETKPTADAVVEDDDDAback to top mRNA from alignment at L-elsbetiae_contig10729:807..1688+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10729.682.1 ID=mRNA_L-elsbetiae_contig10729.682.1|Name=mRNA_L-elsbetiae_contig10729.682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=882bp|location=Sequence derived from alignment at L-elsbetiae_contig10729:807..1688+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10729:807..1688+ >mRNA_L-elsbetiae_contig10729.682.1 ID=mRNA_L-elsbetiae_contig10729.682.1|Name=mRNA_L-elsbetiae_contig10729.682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1764bp|location=Sequence derived from alignment at L-elsbetiae_contig10729:807..1688+ (Laminarionema elsbetiae ELsaHSoW15)back to top |