prot_L-elsbetiae_contig10729.682.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10729.682.1
Unique Nameprot_L-elsbetiae_contig10729.682.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length294
Homology
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: A0A6H5L7H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7H8_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 2.430e-88
Identity = 177/300 (59.00%), Postives = 200/300 (66.67%), Query Frame = 0
Query:    1 ADPAPPSSPVVRVLACGGTYIPSPPKPMLRSVDVETKPTADAVVEXXXXXXXXXXXXXXXXSNLCA---GRSEYXXXXX--------------------REAAKESGMMTCVAVSAAGARGRGILVTGSYDKGVRVLHNVLSSDRDDGNQXXXXXXXXXXXXXXXXXXXXXXXXVTMRLLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKF----EAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLSLVVYARRMGLNRLRALWTAGRLRRARQRRS 273
            + PAP    VVR+LACGGT++P+P KPMLR VDV T   A A                   S+LCA   GRSE     X                      A KE+G+MTCVA+SAAGARGRGILVTGSYDKGVRVLHNVL  DR++                  XXXXXXX  VTMR+LGRH++GVRAVAISADGRW V+GDR+G +KVWEVP+EAPPG    P       EAEFEAHKGYVY+LCMSPDART+VSGGSD+AFRVWDLSL+VYARRM LNRLRALWTA RLRRAR +RS
Sbjct:  218 SSPAPVVPSVVRILACGGTFLPAPAKPMLRRVDVRT--AAAAARADQAGGEEADVVSRPARSDLCAAAAGRSERNGENXXXXXXXXXXXXXXXDARGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVLCPDREN-------------PPSSSXXXXXXXPPVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGIVKVWEVPREAPPGADREPLSSDGAAEAEFEAHKGYVYSLCMSPDARTVVSGGSDKAFRVWDLSLIVYARRMSLNRLRALWTADRLRRARLKRS 502          
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: D8LF89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF89_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 1.450e-65
Identity = 145/252 (57.54%), Postives = 165/252 (65.48%), Query Frame = 0
Query:    1 ADPAPPSSPVVRVLACGGTYIPSPPKPMLRSVDVETKPTADAVVEXXXXXXXXXXXXXXXXSNLCA---GRSE-----------------YXXXXXREAAKESGMMTCVAVSAAGARGRGILVTGSYDKGVRVLHNVLSSDRDDGNQXXXXXXXXXXXXXXXXXXXXXXXXVTMRLLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCK----FEAEFEAHKGYVYALCMSPDARTL 228
            + PAP   PVVR+LACGGT++P+P KPMLR VDV T   A A  +                S+LCA   GRSE                  X      A KE+G+MTCVA+SAAGARGRGILVTGSYDKGVRVLHNVL  DR++              XXXXXXXXXXXXXVTMR+LGRH++GVRAVAISADGRW V+GDR+G +KVWEVP+E PPG    P       EAEFEAHKGYVY+LCMSPDARTL
Sbjct:   21 SSPAPVVPPVVRILACGGTFLPAPAKPMLRRVDVRTAAPAGAGADQAGGEEADVVSRPVR-SDLCAAAAGRSERDGENXXXXXXXXXXXXXXRGGGEAAVKEAGIMTCVAISAAGARGRGILVTGSYDKGVRVLHNVLCPDREN------------PPXXXXXXXXXXXXXVTMRMLGRHEEGVRAVAISADGRWAVTGDRKGLVKVWEVPRETPPGADREPSSPDGAAEAEFEAHKGYVYSLCMSPDARTL 259          
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: A0A2E8D5D7_9PLAN (Cytochrome c domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D5D7_9PLAN)

HSP 1 Score: 62.4 bits (150), Expect = 3.570e-7
Identity = 28/80 (35.00%), Postives = 46/80 (57.50%), Query Frame = 0
Query:  164 VRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLS 243
            V+A+A+SADG+W   G+  G+++++E+P            K     EAH G    +  S D+  LVSGG D+ F+VW+++
Sbjct:  253 VKALAVSADGKWAAMGEESGKVRLYELPSG----------KLVRTLEAHAGAASGVAFSTDSTKLVSGGQDKKFKVWNVA 322          
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: UPI001B87190F (uncharacterized protein n=1 Tax=Suillus bovinus TaxID=48563 RepID=UPI001B87190F)

HSP 1 Score: 57.4 bits (137), Expect = 1.600e-5
Identity = 41/144 (28.47%), Postives = 62/144 (43.06%), Query Frame = 0
Query:   98 GRGILVTGSYDKGVRVLHNVLSSDRDDGNQXXXXXXXXXXXXXXXXXXXXXXXXVTMRLLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWD 241
            GRG +VT SYDK +R L N+     +DG                          V ++++  H  G+R +A+S DG W+VSGD  GR+  W    E+               + H   + +L  SPD+ +L SG  D    +W+
Sbjct:   33 GRGRMVTASYDKKLR-LWNL-----EDG--------------------------VVLKIMEGHTFGIRELAVSKDGEWIVSGDDGGRIIAWNKDGES----------LTQPIKVHSKQIGSLDFSPDSTSLASGSWDTTVELWN 134          
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: A0A3M1LBA9_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1LBA9_9CHLR)

HSP 1 Score: 52.8 bits (125), Expect = 1.970e-5
Identity = 31/81 (38.27%), Postives = 42/81 (51.85%), Query Frame = 0
Query:  160 HKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVW 240
            H D VRAVA+S DGRW+VSG R+  ++ W+      P +  P   F  +       + +L +SPD R L  G  D   RVW
Sbjct:    4 HTDWVRAVAVSPDGRWIVSGSRDRTVRAWD------PASGTPRVLFWNDAP-----ILSLALSPDGRLLACG--DEVGRVW 71          
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: A0A3L7MRL9_9BACT (WD40 repeat domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7MRL9_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 3.490e-5
Identity = 33/88 (37.50%), Postives = 43/88 (48.86%), Query Frame = 0
Query:  156 LLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLS 243
            +L  H   + A+AIS DG+   SGDR G++ VW+       G   P  K   E  AH+G V +L  SPD   L S G D   + W  S
Sbjct:  191 ILKGHTKAISALAISKDGKKAASGDRAGKILVWDW------GAKNPSSK---EITAHQGGVDSLSFSPDTDQLASAGRDALVKTWSTS 269          
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: A0A354GQ39_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354GQ39_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 8.540e-5
Identity = 30/82 (36.59%), Postives = 48/82 (58.54%), Query Frame = 0
Query:  164 VRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYA--PPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLS 243
            +  +A SADG+ V+SG  +  LK+W+    A    +    P +FE   + H   V+    SPD +++VSGGSDR+ +VW+L+
Sbjct:  251 IYCIAWSADGKQVLSGSLDTSLKLWDATTGALVREFHGYKPKEFE---KGHHDGVFTAVFSPDGKSMVSGGSDRSIKVWNLA 329          
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: F0YKK8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKK8_AURAN)

HSP 1 Score: 54.7 bits (130), Expect = 8.560e-5
Identity = 31/87 (35.63%), Postives = 45/87 (51.72%), Query Frame = 0
Query:  154 MRLLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVW 240
            +R+L  H   VR +A    GR + +   +  +KVW+VP      +           +AH G+V AL +  DA+TLVSGG DR  R+W
Sbjct:  358 LRVLAAHGSWVRCLAWHPCGRRLSTASDDRSIKVWDVPDGRVVASLD---------DAHAGFVAALALCGDAKTLVSGGDDRLVRLW 435          
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: UPI00029F6284 (hypothetical protein n=1 Tax=Agaricus bisporus var. bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389) TaxID=936046 RepID=UPI00029F6284)

HSP 1 Score: 54.3 bits (129), Expect = 8.710e-5
Identity = 28/86 (32.56%), Postives = 42/86 (48.84%), Query Frame = 0
Query:  160 HKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLSLV 245
            HKD V +VA+S DGRWVVSG ++  ++ W+                +   + HK  V ++ +SP    L +G  D   R+W  S V
Sbjct:  244 HKDYVLSVAVSHDGRWVVSGSKDRGVQFWDAKNAV----------VQCMLQGHKNSVNSIDLSPAGSILATGSGDWLARIWSYSSV 319          
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Match: K9EL28_9CYAN (WD40 repeat-containing protein n=1 Tax=Leptolyngbya sp. PCC 7375 TaxID=102129 RepID=K9EL28_9CYAN)

HSP 1 Score: 55.1 bits (131), Expect = 8.950e-5
Identity = 26/84 (30.95%), Postives = 40/84 (47.62%), Query Frame = 0
Query:  160 HKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYAPPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLS 243
            H   V +VA S DG+W+V+GD+ G +++WE+     P            FE H   +  L   P    L+SG  D    +WD++
Sbjct:  738 HPSEVWSVAFSHDGKWIVTGDKAGLIRMWEIQDLTEPSMI---------FEGHAHGIRTLAFVPTDEALISGSMDTTIWIWDVN 812          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10729.682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L7H8_9PHAE2.430e-8859.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF89_ECTSI1.450e-6557.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2E8D5D7_9PLAN3.570e-735.00Cytochrome c domain-containing protein n=1 Tax=Pla... [more]
UPI001B87190F1.600e-528.47uncharacterized protein n=1 Tax=Suillus bovinus Ta... [more]
A0A3M1LBA9_9CHLR1.970e-538.27Uncharacterized protein (Fragment) n=1 Tax=Chlorof... [more]
A0A3L7MRL9_9BACT3.490e-537.50WD40 repeat domain-containing protein n=1 Tax=Plan... [more]
A0A354GQ39_9BACT8.540e-536.59Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
F0YKK8_AURAN8.560e-535.63Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
UPI00029F62848.710e-532.56hypothetical protein n=1 Tax=Agaricus bisporus var... [more]
K9EL28_9CYAN8.950e-530.95WD40 repeat-containing protein n=1 Tax=Leptolyngby... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 202..241
e-value: 6.2E-8
score: 42.4
coord: 150..189
e-value: 9.6E-5
score: 31.8
coord: 72..115
e-value: 340.0
score: 1.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 157..188
e-value: 9.0E-5
score: 23.2
coord: 208..241
e-value: 9.1E-6
score: 26.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 157..190
score: 12.012
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 209..243
score: 14.585
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 46..279
e-value: 7.5E-25
score: 89.5
NoneNo IPR availablePANTHERPTHR42968FAMILY NOT NAMEDcoord: 75..267
NoneNo IPR availablePANTHERPTHR42968:SF10IP10415Pcoord: 75..267
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 157..250
score: 18.642
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 87..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10729contigL-elsbetiae_contig10729:807..1688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10729.682.1mRNA_L-elsbetiae_contig10729.682.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10729 807..1688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10729.682.1 ID=prot_L-elsbetiae_contig10729.682.1|Name=mRNA_L-elsbetiae_contig10729.682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp
ADPAPPSSPVVRVLACGGTYIPSPPKPMLRSVDVETKPTADAVVEDDDDA
AAAAAGRPPDRSNLCAGRSEYDDDDEREAAKESGMMTCVAVSAAGARGRG
ILVTGSYDKGVRVLHNVLSSDRDDGNQRSSSSSPSSAKNGAAPPPPPPPP
PVTMRLLGRHKDGVRAVAISADGRWVVSGDREGRLKVWEVPQEAPPGTYA
PPCKFEAEFEAHKGYVYALCMSPDARTLVSGGSDRAFRVWDLSLVVYARR
MGLNRLRALWTAGRLRRARQRRSSGTSSRSSTSPRTSGWGGGKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf