mRNA_L-elsbetiae_contig10727.679.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Match: A0A6H5L8R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R1_9PHAE) HSP 1 Score: 278 bits (711), Expect = 9.320e-85 Identity = 194/300 (64.67%), Postives = 209/300 (69.67%), Query Frame = 1 Query: 1 MVCPPGMDPEVFAQLPAEMQQEVIREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMRAAXXXXXXXXXXXXXXXXXGGPADPSHAEEMDNASIVATLPPEVRRDVLLTADEALLGTLPPNLVAEAMVLRERIPHQAEFQAAQAAQVAGYASRVRAGTGAG-----------GAARGSAAA----------GVAEA--------------------------KNAHEGEWKLEADLKGSDTVPPRVPRETLVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPAVR 759 +VCPPGMDP+VFAQLP +MQQEV+REHRST+GSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMR A GGPADPS A EMDNAS VATLPPE+RR+VLL+AD+ALL TLPP+LVAEAMV+RERIPHQA AQ AGYAS VRAG AARGS+ A VA A +N HEGEWKLEAD KGSDT PP+VPRET+VMLIRLLHLLTPIRPHRLLQRTVLNLCAGHP VR Sbjct: 510 LVCPPGMDPDVFAQLPPDMQQEVVREHRSTVGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMREAPGNA-------------GGPADPSRASEMDNASFVATLPPELRREVLLSADDALLSTLPPDLVAEAMVMRERIPHQA-------AQAAGYASGVRAGAXXXXXXXXXXXXXXSAARGSSGAQTXXXXXXXTNVASAAQAIGGWPCVENCCVCKYIGAARQALRNTHEGEWKLEADPKGSDTTPPQVPRETVVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPLVR 789
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Match: D7G3W3_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W3_ECTSI) HSP 1 Score: 272 bits (696), Expect = 5.630e-80 Identity = 169/265 (63.77%), Postives = 179/265 (67.55%), Query Frame = 1 Query: 103 EDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMRAAXXXXXXXXXXXXXXXXXGGPADPSHAEEMDNASIVATLPPEVRRDVLLTADEALLGTLPPNLVAEAMVLRERIPHQAEFQAAQAAQVAGYASRVRAGT------------------GAGGAARGS---AAAGVAEA-----------KNAHEGEWKLEADLKGSDTVPPRVPRETLVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPAVRRAVVQALVHLIKSD 801 EDQAELLEAA LEQEARNRRMR A GGP DPS A EMDNAS VATLPPE+RR+VLL+AD+ALL TLPPNLVAEAMV+RERIPHQAEFQAAQAAQ AGYAS VRAG G+ GA GS A VA A +N HEGEWKLEADLKGSDT PP+VPRET+VMLIRLLHLLTPIRPHRLLQRTVLNLCAGHP VRRAVVQALVH+IKSD Sbjct: 602 EDQAELLEAAGLDPEALAALPADMRREVLEQEARNRRMREAPGNA-------------GGPVDPSRASEMDNASFVATLPPELRREVLLSADDALLSTLPPNLVAEAMVMRERIPHQAEFQAAQAAQAAGYASGVRAGXXXXXXXXXXXXXXXSAARGSSGAQTGSXXXGATNVASAAQAIGAARQALRNTHEGEWKLEADLKGSDTTPPQVPRETVVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPLVRRAVVQALVHMIKSD 853
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Match: A0A7S2W4E8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W4E8_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.690e-24 Identity = 110/280 (39.29%), Postives = 158/280 (56.43%), Query Frame = 1 Query: 1 MVCPPGMDPEVFAQLPAEMQQEVIREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMRAAXXXXXXXXXXXXXXXXXGGPADPSHAEEMDNASIVATLPPEVRRDVLLTADEALLGTLPPNLVAEAMVLRERIP--HQAEFQAAQAAQV--AGYASRVRAGTGAGGAARGSAAAGVAEAKNAHE-GEWKLEADLKGSDTVPPRVPRET--------LVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPAVRRAVVQALVHLIKSD 801 +VCPPGMD EVF LP EMQQE+I++H+ T+ A+L ++XXXXXXXXXXXXXXXXXX RR+R PADPS+AEEMDNAS + +L P++R ++LLTA+E+ L TLP +++AEA +LRER H+ AA +G + R+G A A+ + A+ + ++ G+ + + + +PP + E L LIRL LL+P+RP RLLQ+ + N+C +RR+V+ V L+ D Sbjct: 673 LVCPPGMDLEVFNSLPHEMQQEIIQQHQETINVA---AQLDASSXXXXXXXXXXXXXXXXXXXXXXXXERRLRDQA------------------PADPSNAEEMDNASFIVSLAPDLREEILLTAEESFLNTLPSDIIAEAQLLRERAASHHRRSNDVVVAAPSGNSGIEAPPRSGANASSASEENQASTHVSGRRRNKIGKMRTDCNRSSIIYMPPVIKNEVGPLMTSNALKALIRLTFLLSPVRPQRLLQKLIQNICVNAD-IRRSVLTCSVALLNDD 930
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Match: A0A1Z5JHS1_FISSO (HECT-type E3 ubiquitin transferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHS1_FISSO) HSP 1 Score: 110 bits (276), Expect = 9.690e-24 Identity = 93/281 (33.10%), Postives = 133/281 (47.33%), Query Frame = 1 Query: 1 MVCPPGMDPEVFAQLPAEMQQEVIREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMRAAXXXXXXXXXXXXXXXXXGGPADPSHAEEMDNASIVATLPPEVRRDVLLTADEALLGTLPPNLVAEAMVLRERIPHQA----------EFQAAQAAQVAGYASRVRAGTGAGGAARGSAAAGVAEAKNAHEGEWKLEADLKGSDTVPPR----VPRETLVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPAVRRAVVQALVHLIKSD 801 +VCPPG DPEVF LP EMQ + + ++ +T E + EL E+ + R R G ADPSHAEEMD AS +A+L P +R +VLLTAD ++L +LPP++VAEA VLRER E Q A V G S A TG RG+ + K G++K+E DL + +P V + + + I+L L++PIRP RL+Q+ + N C+ P +R + A + L+ + Sbjct: 3002 LVCPPGFDPEVFNSLPVEMQHDCVSQYNATQ---ELEMELRESTLDPSVLAELPEDIRRDIIEQDRIERERARQQNEGD--------------GAADPSHAEEMDTASFIASLAPGLREEVLLTADNSVLSSLPPDVVAEAQVLRERASGLRDGRLFAESVDETQQGNAVGVDGTVSSRLAVTG-----RGTVTEMPGQKKRQRTGKFKVEKDLDDTVYLPNSLFSPVCKSDVQLFIKLFFLVSPIRPQRLMQKVLQNFCSI-PTLREFFLNAFLALLNEN 3259
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Match: A0A7S2Y5L7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y5L7_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.220e-23 Identity = 112/271 (41.33%), Postives = 147/271 (54.24%), Query Frame = 1 Query: 1 MVCPPGMDPEVFAQLPAEMQQEVIREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMRAAXXXXXXXXXXXXXXXXXGGPADPSHAEEMDNASIVATLPPEVRRDVLLTADEALLGTLPPNLVAEAMVLRERIPHQAEFQAAQAAQVAGYASRVRAGTGAGGAARGSAAAGVAEAKNAHEGEWKLEADLKGSDTVPPRVPRET----LVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPAVRRAVVQALVHLIKSD 801 +VCPPG+DPE F LP EMQ +V+REH S E AEL + + XXXXXXXXXXXXXXXX EQE R R PADPS A +MDNAS +ATLPPE+R +VL TAD+ L +LPPNL+AEA VLRER Q + +AA A S AA K G+ K+EA+ + P + + L ++++L LL+P+RP RLLQ+ + N C+ P +R + AL+ L+ + Sbjct: 402 LVCPPGVDPEAFRALPREMQLDVVREHSQ---SSELAAEL-DGSTLXXXXXXXXXXXXXXXXXEQERRERSRETEEAA----------------PADPSLAADMDNASFIATLPPELRAEVLATADDETLNSLPPNLIAEANVLRERAAEQRQ----RAAXXXXXXXXXXXXXXXXXRAAPSEAASNTR-KKPRTGKLKVEANREDLIYTPEGMSQPLAKCDLQLILQLFFLLSPVRPQRLLQKILQNFCSK-PELRAVLSTALLQLLHEN 646
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Match: A0A1Z5KPP7_FISSO (HECT-type E3 ubiquitin transferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPP7_FISSO) HSP 1 Score: 107 bits (268), Expect = 1.110e-22 Identity = 89/282 (31.56%), Postives = 140/282 (49.65%), Query Frame = 1 Query: 1 MVCPPGMDPEVFAQLPAEMQQEVIREHRSTMG-SMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMRAAXXXXXXXXXXXXXXXXXGGPADPSHAEEMDNASIVATLPPEVRRDVLLTADEALLGTLPPNLVAEAMVLRERIPHQAE----------FQAAQAAQVAGYASRVRAGTGAGGAARGSAAAGVAEAKNAHEGEWKLEADLKGSDTVPPR----VPRETLVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPAVRRAVVQALVHLIKSD 801 +VCPPG DPEVF LP EMQ + + ++ +T M+ + L+ + +E+E +++ G ADPSHAEEMD AS +A+L P +R +VLLTAD ++L +LPP++VAEA VLRER + Q A G S A TG RG+ + ++ K G++K+E DL + +P V + + + I+L L++PIRP RL+Q+ + N C+ P++R + A + L+ ++ Sbjct: 3002 LVCPPGFDPEVFNSLPVEMQHDCVSQYNATQELEMQLRESTLDPSVLAELPEDIRRDIIEQDRIERERARQQIEGD------------------GVADPSHAEEMDTASFIASLAPGLREEVLLTADSSVLSSLPPDVVAEAQVLRERASGLRDGRLFAENVDGAQQGNAVGGDGTDSSRLAVTG-----RGTVSELPSQKKRQRTGKFKVEKDLDDTVYLPSSLFSPVCKSDVKLFIKLFFLVSPIRPQRLMQKVIQNFCSI-PSLREFFLTAFLALLNAN 3259
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Match: A0A7S2L5N5_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L5N5_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.670e-22 Identity = 105/285 (36.84%), Postives = 155/285 (54.39%), Query Frame = 1 Query: 1 MVCPPGMDPEVFAQLPAEMQQEVIREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMRAAXXXXXXXXXXXXXXXXXGGPADPSHAEEMDNASIVATLPPEVRRDVLLTADEALLGTLPPNLVAEAMVLRERI--PHQAEFQAAQAAQVAGYASRVRAGTGAGGAARGSAAAGVAEAKN--------AHEGEWKLEADLK--------GSDTVPPRVPRETLVMLIRLLHLLTPIRPHRLLQRTVLNLCAGHPAVRRAVVQALVHLIKSD 801 + CPP +DPEVFA LP EMQQE++ EH + M + A + + XXXXXXXXXXXXXXXX E+E +R+R ADP++AEE+D AS +A+L PE+R+D+LLTAD+ L LP N+ AEA LRER+ HQ A AA A GAG A GS + +A++ G+ ++E D + D + P + +++ +L+ LL+L++P++P R++ + +LNLC H R + +L L+ +D Sbjct: 1360 IACPPDVDPEVFASLPLEMQQELLAEHNA----MNEVAAQIPGSSLXXXXXXXXXXXXXXXXXEEEQHQQRLREREAAQPA--------------ADPANAEEIDPASFLASLTPELRQDILLTADDTFLQGLPQNIQAEANALRERVVASHQRRRDEANAANAA---------AGAGSRAVGSRPSSANDAQSNAPPRARRQRNGKLRVETDKEEIIYIPESARDGLGPLINAKSVKVLLNLLYLVSPLQPQRVVHKLLLNLCL-HAESRGIFLYSLAALLNND 1616
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Match: A0A7S4HZ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HZ14_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.140e-22 Identity = 66/151 (43.71%), Postives = 85/151 (56.29%), Query Frame = 1 Query: 1 MVCPPGMDPEVFAQLPAEMQQEVIREHRSTMG----SMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMRAAXXXXXXXXXXXXXXXXXGGPADPSHAEEMDNASIVATLPPEVRRDVLLTADEALLGTLPPNLVAEAMVLRER 441 + CPPGMD EVF LP +MQ+EVI EH ST G + +L + XX +EQE R RR R PADPS+AEEMDNAS VA+L P++R ++LLTAD+A LG+LPP++ +EA +LRER Sbjct: 187 LACPPGMDLEVFNSLPPDMQREVIAEHESTTGGGGSTAASDVQLDSTSALDPEALAALPEEMRXXVIEQERRERRAREEERSEP--------------PADPSNAEEMDNASFVASLAPDLREEILLTADDAFLGSLPPDMQSEAQILRER 323
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Match: A0A448ZD07_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD07_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.330e-21 Identity = 117/271 (43.17%), Postives = 153/271 (56.46%), Query Frame = 1 Query: 1 MVCPPGMDPEVFAQLPAEMQQEVIREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMRAAXXXXXXXXXXXXXXXXXGGPADPSHAEEMDNASIVATLPPEVRRDVLLTADEALLGTLPPNLVAEAMVLRERIPHQAEFQAAQA----------------AQVAGYASRVRAGTGAGGAARGSAAAGVAEAKNAHEGEWKLEADLKGSDTVPPR-------VPRETLVMLIRLLHLLTPIRPHRLLQRTVLNLCAG 744 +VCP GMDPEVF LP EMQQEVI + R T ++ DQ L+A XXXXXXXXXXXXXXXXX XXXXXXXX PADPS+A EMDNAS +A+L PE+R D+LLTADE+++ +LPPN++AEA VLRER +AE QA + A S +++G G R V+ + G+ ++++D K +P R + + L LIR L+LL+PIRPHR+LQ+ N+ Sbjct: 3227 LVCPSGMDPEVFDALPIEMQQEVINQARET-SALADQ---LDAGSXXXXXXXXXXXXXXXXXXXXXX-----------------XXXXXXXXXXPADPSNAAEMDNASFIASLAPELRNDILLTADESVIQSLPPNIIAEAQVLRERRA-RAEAQAHRRNFAENSTQGNQRTSTNANNVVVRSNIQSGQG-----RDQ----VSSRRKQRTGKIRVDSDRKEIAFIPTRGHVSSTIIAKSDLKALIRFLYLLSPIRPHRILQKVFQNIATN 3466
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Match: A0A7S1VJ82_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VJ82_9STRA) HSP 1 Score: 103 bits (256), Expect = 4.170e-21 Identity = 88/257 (34.24%), Postives = 123/257 (47.86%), Query Frame = 1 Query: 4 VCPPGMDPEVFAQLPAEMQQEVIREHRSTMGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMRAAXXXXXXXXXXXXXXXXXGGPADPSHAEEMDNASIVATLPPEVRRDVLLTADEALLGTLPPNLVAEAMVLRERIPHQAEFQAAQ---AAQVAGYASRVRAGTGAGGAARGSAAAGVAEAKNAHEGEWKLEADLKGSDTVPPRVPRETLVM-------LIRLLHLLTPIRPHRLLQRTVLNLCAG 744 VCPPGMD E F LP +MQQEV+ +H+ T E A+L + + Q+ R R A PADPS+A EMDNAS + +L PE+R ++LLTADE L +LPPN+ AEA +LRER + + + AA+ + +A T AG R + A G+ K + D VP + + + ++RLL LL+P+RPHRLLQ+ LNL + Sbjct: 1765 VCPPGMDAEAFNSLPPDMQQEVVSQHQITE---ELTAQLDPTSGLDPSVLAELPEDMRRDAIAQDRREREEAARAAQ----------------PADPSNAAEMDNASFLVSLAPELREEILLTADENFLNSLPPNIRAEAQLLRERASVRRQIRVPPDDGAARSVRETNEGQANTAAGSRRRRT---------RALTGKVKADCDRSQVIFVPQGLKEKDVAFGCPQMQTILRLLFLLSPVRPHRLLQKLFLNLSSN 1993 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10727.679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10727.679.1 >prot_L-elsbetiae_contig10727.679.1 ID=prot_L-elsbetiae_contig10727.679.1|Name=mRNA_L-elsbetiae_contig10727.679.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=267bp MVCPPGMDPEVFAQLPAEMQQEVIREHRSTMGSMEDQAELLEAAGLDPEAback to top mRNA from alignment at L-elsbetiae_contig10727:3620..4489+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10727.679.1 ID=mRNA_L-elsbetiae_contig10727.679.1|Name=mRNA_L-elsbetiae_contig10727.679.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=870bp|location=Sequence derived from alignment at L-elsbetiae_contig10727:3620..4489+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10727:3620..4489+ >mRNA_L-elsbetiae_contig10727.679.1 ID=mRNA_L-elsbetiae_contig10727.679.1|Name=mRNA_L-elsbetiae_contig10727.679.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1602bp|location=Sequence derived from alignment at L-elsbetiae_contig10727:3620..4489+ (Laminarionema elsbetiae ELsaHSoW15)back to top |