mRNA_L-elsbetiae_contig10726.676.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Match: A0A6H5KZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ63_9PHAE) HSP 1 Score: 251 bits (642), Expect = 2.100e-81 Identity = 124/137 (90.51%), Postives = 130/137 (94.89%), Query Frame = 1 Query: 1 QAPQEPATEKARRANRKAEQPAGCKTVFVKNLPYDVDEAGVNEALSGCGRIVSVRLAAWNHTHKLKGFGYVEFSTERGAETCVRKQEGLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVH 411 QAPQEPATEKARRANRKAEQPAGC+TVFVKNLPYDV+E V+EAL+GCGRI SVRLA WNHT KLKGFGYVEFSTERGAETCVR Q+ LS+GGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVH Sbjct: 202 QAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSIGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVH 338
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Match: D7FP47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP47_ECTSI) HSP 1 Score: 251 bits (642), Expect = 3.020e-81 Identity = 124/137 (90.51%), Postives = 129/137 (94.16%), Query Frame = 1 Query: 1 QAPQEPATEKARRANRKAEQPAGCKTVFVKNLPYDVDEAGVNEALSGCGRIVSVRLAAWNHTHKLKGFGYVEFSTERGAETCVRKQEGLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVH 411 QAPQEPATEKARRANRKAEQP GC+TVFVKNLPYDVDE V+EAL+GCGRI SVRLA WNHT KLKGFGYVEFSTERGAETCVR Q+ LS+GGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVH Sbjct: 214 QAPQEPATEKARRANRKAEQPTGCRTVFVKNLPYDVDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQNLSIGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFKVH 350
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Match: A0A6G0WFD1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WFD1_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.370e-32 Identity = 60/106 (56.60%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 25 EKARRANRKAEQPAGCKTVFVKNLPYDVDEAGVNEALSGCGRIVSVRLAAWNHTHKLKGFGYVEFSTERGAETCVRKQEGLSVGGRPLVVDFETGAPKGSFRRQDG 342 ++AR + + + GC+TVF+K LPYDVDEA V EALS CG IVSVRL WNHT KLKGFGYVEF+ E A +K G+ +G R +++D +TGAPK SFR DG Sbjct: 160 DQARSSRKNVKITKGCRTVFIKQLPYDVDEATVKEALSSCGDIVSVRLPLWNHTKKLKGFGYVEFADEASAVEATKKS-GMKIGSRMVLIDLDTGAPKASFRNTDG 264
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Match: A0A836CEI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI7_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.960e-30 Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 52 AEQPAGCKTVFVKNLPYDVDEAGVNEALSGCGRIVSVRLAAWNHTHKLKGFGYVEFSTERGAETCVRKQEGLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTS 363 A +P GC+TVFVKNLPYD DE V +A S CG + VRLA WN+T + KGFGYV+F+ E GA+ V +Q + V GRP++VD+E G KGSFR DG + +K + Sbjct: 320 APRPKGCRTVFVKNLPYDADEQMVTKAFSKCGEVAIVRLAIWNNTKQRKGFGYVDFADETGAQAAVERQANIKVAGRPVLVDYEVGRVKGSFRLADGQKYEKVA 423
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Match: W7TYE4_9STRA (31 kDa chloroplastic n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYE4_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.570e-30 Identity = 56/101 (55.45%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 55 EQPAGCKTVFVKNLPYDVDEAGVNEALSGCGRIVSVRLAAWNHTHKLKGFGYVEFSTERGAETCVRKQEGLSVGGRPLVVDFETGAPKGSFRRQDGAQIKK 357 ++P GC TVFVKNLPY+ E V EA + CG+I +VRLA W HT + KGF YV+F E AE V+KQ + VGGR + VD+ETGAPK S+R DG Q K Sbjct: 188 DKPPGCDTVFVKNLPYNTTEDAVREAFTFCGKIKTVRLAVWQHTQQQKGFCYVQFEKENAAEIAVKKQGAIQVGGRKVFVDYETGAPKASYRAPDGRQWSK 288
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Match: K3WSU1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU1_GLOUD) HSP 1 Score: 117 bits (294), Expect = 4.730e-29 Identity = 57/99 (57.58%), Postives = 71/99 (71.72%), Query Frame = 1 Query: 67 GCKTVFVKNLPYDVDEAGVNEALSGCGRIVSVRLAAWNHTHKLKGFGYVEFSTERGAETCVRKQEGLSVGGRPLVVDFET-GAPKGSFRRQDGAQIKKT 360 GCKTVFVK LPYD++E + +AL+ CG I+SVRL WNHT KLKGFGYVEFS E A V K+ G+ VGGR ++++ + GAPK SFR+ DG KT Sbjct: 236 GCKTVFVKQLPYDIEEQALRDALASCGTIMSVRLPIWNHTKKLKGFGYVEFSKEEEAVAAV-KRSGMKVGGRMVIINLDVAGAPKASFRQTDGQYWNKT 333
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Match: A0A2D4BXX0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXX0_PYTIN) HSP 1 Score: 115 bits (289), Expect = 3.280e-28 Identity = 56/94 (59.57%), Postives = 70/94 (74.47%), Query Frame = 1 Query: 67 GCKTVFVKNLPYDVDEAGVNEALSGCGRIVSVRLAAWNHTHKLKGFGYVEFSTERGAETCVRKQEGLSVGGRPLVVDFETG--APKGSFRRQDG 342 GC+TVF+K+LPYDV+EA V EAL+ CG I+SVRL WNHT KLKGFGYVEFS+E A V K+ G+ +G R +++ ET APK SFR +DG Sbjct: 246 GCRTVFIKHLPYDVEEAAVREALASCGTILSVRLPLWNHTKKLKGFGYVEFSSEDEAIAAV-KRSGMKIGDRMVIISLETAGSAPKASFRLRDG 338
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Match: A0A024UKP4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKP4_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.750e-28 Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 67 GCKTVFVKNLPYDVDEAGVNEALSGCGRIVSVRLAAWNHTHKLKGFGYVEFSTERGAETCVRKQEGLSVGGRPLVVDFETGAPKGSFRRQDG 342 GC+TV++K LPYD+DE V AL CG I SVRL W HT KLKGFGYVEFS E A K+ G+ +G R +++D +TGAPK SFR+ +G Sbjct: 168 GCRTVYIKQLPYDIDEETVKSALESCGAIASVRLPMWGHTKKLKGFGYVEFSDEASAAKAA-KRSGMKIGNRMVLIDLDTGAPKASFRQTNG 258
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Match: A0A8K1CG62_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG62_PYTOL) HSP 1 Score: 114 bits (284), Expect = 1.320e-27 Identity = 55/94 (58.51%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 67 GCKTVFVKNLPYDVDEAGVNEALSGCGRIVSVRLAAWNHTHKLKGFGYVEFSTERGAETCVRKQEGLSVGGRPLVVDFETG--APKGSFRRQDG 342 GC+TVF+K+LPYDV+E+ + EALS CG + SVRL WNHT KLKGFGYVEFSTE A V K+ G+ +G R +++ ET APK SFR DG Sbjct: 232 GCRTVFIKHLPYDVEESTIKEALSTCGTVQSVRLPLWNHTKKLKGFGYVEFSTEDEAVAAV-KRSGMKIGDRMVIISLETATSAPKASFRLSDG 324
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Match: A0A485L4I6_9STRA (Aste57867_15645 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4I6_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.360e-27 Identity = 50/92 (54.35%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 67 GCKTVFVKNLPYDVDEAGVNEALSGCGRIVSVRLAAWNHTHKLKGFGYVEFSTERGAETCVRKQEGLSVGGRPLVVDFETGAPKGSFRRQDG 342 GC+TV++K LPY+V+E V +AL+ CG I+SVRL W HT KLKGFGYVEF+ E GA K+ G+ +G R +++D +TGAPK SFR+ +G Sbjct: 173 GCRTVYIKQLPYEVEEDTVKQALASCGEILSVRLPMWGHTKKLKGFGYVEFADEAGAVKAT-KRSGMKIGDRMVLIDLDTGAPKASFRQTNG 263 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10726.676.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10726.676.1 >prot_L-elsbetiae_contig10726.676.1 ID=prot_L-elsbetiae_contig10726.676.1|Name=mRNA_L-elsbetiae_contig10726.676.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp QAPQEPATEKARRANRKAEQPAGCKTVFVKNLPYDVDEAGVNEALSGCGRback to top mRNA from alignment at L-elsbetiae_contig10726:5447..6579- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10726.676.1 ID=mRNA_L-elsbetiae_contig10726.676.1|Name=mRNA_L-elsbetiae_contig10726.676.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1133bp|location=Sequence derived from alignment at L-elsbetiae_contig10726:5447..6579- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10726:5447..6579- >mRNA_L-elsbetiae_contig10726.676.1 ID=mRNA_L-elsbetiae_contig10726.676.1|Name=mRNA_L-elsbetiae_contig10726.676.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=834bp|location=Sequence derived from alignment at L-elsbetiae_contig10726:5447..6579- (Laminarionema elsbetiae ELsaHSoW15)back to top |