mRNA_L-elsbetiae_contig1069.648.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1069.648.1
Unique NamemRNA_L-elsbetiae_contig1069.648.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1069.648.1 vs. uniprot
Match: A0A6H5KW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW91_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 2.660e-112
Identity = 183/300 (61.00%), Postives = 214/300 (71.33%), Query Frame = 1
Query:  649 TFSKAXXXXXXXXXXXXXXXSFSSFCERPFPFTNESALPCVELPTGEDRQNGVGAFYDEEGCALEQQSRSIVGCNLGGVANCRLCVFNRALFSQEILGGEEVPFVNCPCCVPDTYQMGGDIDCDFLFSSAPVSAXXXXXXXXXXXXXXXXXXPGATTAPLEAGDRAVDVGTPAPSVSPATLAPTIPPIPTEPCEIGAGGDTTGNSTVCVDVASPLDWENGIGTFYERGCAGLGCGIAGFADCRQCIFDDAAYAASGGTDALVECPCCVPITYKLRPEDSECIWPATPAPVSLAGSGASRP 1548
            TFSKA   XXXXXXXXXXX  + SFCERP+PF NES + CVE+ T +DR NGVGAFYDE GCA  Q     VGC+LGGV +CRLCVF+RAL+SQ IL GEEVPFV+CPCCVP+ Y +GGDIDCDF+ S+AP+              XXX    G T++PL   +    V T AP +           I  EPCE+G  GDTTG+ST+CVD+AS LD  NGIGT+YE  C GLGC IAG  DCRQCIFD+ AYAASGGTDALVECPCCVP+ Y+LRP+ SEC WPATP P+++ GSG SRP
Sbjct:  107 TFSKAPTPXXXXXXXXXXXFPYYSFCERPYPFANESDILCVEMATDQDRANGVGAFYDELGCAGAQSGTGFVGCSLGGVPSCRLCVFHRALYSQTILNGEEVPFVDCPCCVPEVYGVGGDIDCDFVTSAAPIPVPAATPSPTMAPQXXXTMVSGVTSSPLVEDEARGGVATLAPVMXXXXXXXXXXTIAMEPCEVGVAGDTTGDSTLCVDIASTLDLANGIGTYYEANCEGLGCDIAGNVDCRQCIFDETAYAASGGTDALVECPCCVPVIYQLRPDSSECTWPATPTPITVEGSGGSRP 406          
BLAST of mRNA_L-elsbetiae_contig1069.648.1 vs. uniprot
Match: D8LN92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN92_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 1.940e-103
Identity = 170/259 (65.64%), Postives = 200/259 (77.22%), Query Frame = 1
Query:  775 LPTGEDRQNGVGAFYDEEGCALEQQSRSIVGCNLGGVANCRLCVFNRALFSQEILGGEEVPFVNCPCCVPDTYQMGGDIDCDFLFSSAPVSAXXXXXXXXXXXXXXXXXXPGATTAPLEAGDRAVDVGTPAPSVSPATLAPTIPP-IPTEPCEIGAGGDTTGNSTVCVDVASPLDWENGIGTFYERGCAGLGCGIAGFADCRQCIFDDAAYAASGGTDALVECPCCVPITYKLRPEDSECIWPATPAPVSLAGSGASRP 1548
            + T  DR NGVGAFYDE GCA  Q     VGC+LG V NCRLCVF+RAL+SQ IL GEEVPFV+CPCCVP+ Y++GGDIDCDF+ S+ P+     XXXXXXXXXXXXXXXPG T+AP    + +V V T A  V   T APT  P I  EPCE+G  GDTTG+ST+CVD++SP+D  NGIGT+YE  C GLGC IAG  DCRQCIFD+ AYAASGGTDALVECPCCVP++Y+LRP+ SEC WPATP+P+++ GSG SRP
Sbjct:    1 MATDADRANGVGAFYDELGCAGAQSGTGFVGCSLGDVPNCRLCVFHRALYSQNILEGEEVPFVDCPCCVPEVYEVGGDIDCDFVASAPPIPVPAAXXXXXXXXXXXXXXXPGVTSAPPAEDEASVGVATLA-XVMAVTPAPTAAPVIAMEPCEVGVAGDTTGDSTLCVDISSPVDLANGIGTYYEANCEGLGCDIAGNEDCRQCIFDETAYAASGGTDALVECPCCVPVSYQLRPDSSECTWPATPSPINVEGSGGSRP 258          
BLAST of mRNA_L-elsbetiae_contig1069.648.1 vs. uniprot
Match: D8LDL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL0_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 8.460e-100
Identity = 153/266 (57.52%), Postives = 185/266 (69.55%), Query Frame = 1
Query:  724 CERPFPFTNESALPCVELPTGEDRQNGVGAFYDEEGCALEQQSRSIVGCNLGGVANCRLCVFNRALFSQEILGGEEVPFVNCPCCVPDTYQMGGDIDCDFLFSSAPVSAXXXXXXXXXXXXXXXXXXPGATTAPLEAGDRAVDVGTPAPSVSPATLAPTIPPIPTEPCEIGAGGDTTGNSTVCVDVASPLDWENGIGTFYERGCAGLGCGIAGFADCRQCIFDDAAYAASGGTDALVECPCCVPITYKLRPEDSECIWPATPAPVS 1521
            CERP+ ++NES +PCV++ T  D+ +G GAFYDEEGC  + +S S+VGC  GGV NCRLCVFNR LFS+ ILGGEEVPFV+CPCCVPDTY+MGGDIDC+F +SS PVSA             XXXXX G T +                     TLAPTI   P EPCE  AGG+++  + +CVD+AS +DW++GIGT+YE GC G+GC IAG  DCRQC+FD  AYA SGG   L  CPCCVPITYKLRPE SEC+WP TP+P +
Sbjct:   39 CERPYTWSNESEIPCVDMVTAVDKASGAGAFYDEEGCGPDAESISVVGCAHGGVGNCRLCVFNRGLFSETILGGEEVPFVDCPCCVPDTYEMGGDIDCEFAYSSPPVSAPTPVSVEGNASTPXXXXXEGDTNS---------------------TLAPTI---PMEPCETSAGGNSS--ALLCVDIASAVDWDDGIGTYYESGCQGVGCDIAGHVDCRQCVFDSEAYATSGGNLELAACPCCVPITYKLRPEGSECVWPPTPSPTA 278          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1069.648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KW91_9PHAE2.660e-11261.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN92_ECTSI1.940e-10365.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDL0_ECTSI8.460e-10057.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1069contigL-elsbetiae_contig1069:19286..25533 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-16_004120.1
Exons8
Model size1548
Cds size1548
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1069.648.1prot_L-elsbetiae_contig1069.648.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1069 19286..25533 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815287.666322-CDS-L-elsbetiae_contig1069:19285..198441622815287.666322-CDS-L-elsbetiae_contig1069:19285..19844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 19286..19844 +
1691682818.6053498-CDS-L-elsbetiae_contig1069:19285..198441691682818.6053498-CDS-L-elsbetiae_contig1069:19285..19844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 19286..19844 +
1622815287.6841445-CDS-L-elsbetiae_contig1069:20141..203511622815287.6841445-CDS-L-elsbetiae_contig1069:20141..20351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 20142..20351 +
1691682818.6205714-CDS-L-elsbetiae_contig1069:20141..203511691682818.6205714-CDS-L-elsbetiae_contig1069:20141..20351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 20142..20351 +
1622815287.6951463-CDS-L-elsbetiae_contig1069:21569..216811622815287.6951463-CDS-L-elsbetiae_contig1069:21569..21681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 21570..21681 +
1691682818.6308246-CDS-L-elsbetiae_contig1069:21569..216811691682818.6308246-CDS-L-elsbetiae_contig1069:21569..21681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 21570..21681 +
1622815287.9125006-CDS-L-elsbetiae_contig1069:22976..230461622815287.9125006-CDS-L-elsbetiae_contig1069:22976..23046Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 22977..23046 +
1691682818.6413414-CDS-L-elsbetiae_contig1069:22976..230461691682818.6413414-CDS-L-elsbetiae_contig1069:22976..23046Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 22977..23046 +
1622815287.925366-CDS-L-elsbetiae_contig1069:23442..237001622815287.925366-CDS-L-elsbetiae_contig1069:23442..23700Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 23443..23700 +
1691682818.6515322-CDS-L-elsbetiae_contig1069:23442..237001691682818.6515322-CDS-L-elsbetiae_contig1069:23442..23700Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 23443..23700 +
1622815287.937881-CDS-L-elsbetiae_contig1069:24110..242151622815287.937881-CDS-L-elsbetiae_contig1069:24110..24215Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 24111..24215 +
1691682818.6614907-CDS-L-elsbetiae_contig1069:24110..242151691682818.6614907-CDS-L-elsbetiae_contig1069:24110..24215Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 24111..24215 +
1622815287.949671-CDS-L-elsbetiae_contig1069:24423..245191622815287.949671-CDS-L-elsbetiae_contig1069:24423..24519Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 24424..24519 +
1691682818.6705458-CDS-L-elsbetiae_contig1069:24423..245191691682818.6705458-CDS-L-elsbetiae_contig1069:24423..24519Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 24424..24519 +
1622815287.9618378-CDS-L-elsbetiae_contig1069:25395..255331622815287.9618378-CDS-L-elsbetiae_contig1069:25395..25533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 25396..25533 +
1691682818.6799855-CDS-L-elsbetiae_contig1069:25395..255331691682818.6799855-CDS-L-elsbetiae_contig1069:25395..25533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1069 25396..25533 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1069.648.1

>prot_L-elsbetiae_contig1069.648.1 ID=prot_L-elsbetiae_contig1069.648.1|Name=mRNA_L-elsbetiae_contig1069.648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=516bp
ERTADRKWRSTPPEHAVLHFIMCLSRFEILDIRLSSASWITSGRDAAATT
GASFLRSILTGAMVDCSTVRKTGQGTTLLFLLHEHPRESSLFLLLPPASQ
SALLASVLLLTMRRQQLLCGLLSLSLCVLGAVGQTNPAPVRPLPTPEPTP
GPTKEPTPGPTPGPTEAPTPGPTNTPTEAPTIGPTEEPTPSPTPAPTLAP
TPSPTPAPTLSPTPGPTFSKAPTPPPTPSPTPPPTFSFSSFCERPFPFTN
ESALPCVELPTGEDRQNGVGAFYDEEGCALEQQSRSIVGCNLGGVANCRL
CVFNRALFSQEILGGEEVPFVNCPCCVPDTYQMGGDIDCDFLFSSAPVSA
PPPTPSPTGAPLAEPTVAPGATTAPLEAGDRAVDVGTPAPSVSPATLAPT
IPPIPTEPCEIGAGGDTTGNSTVCVDVASPLDWENGIGTFYERGCAGLGC
GIAGFADCRQCIFDDAAYAASGGTDALVECPCCVPITYKLRPEDSECIWP
ATPAPVSLAGSGASRP
back to top

mRNA from alignment at L-elsbetiae_contig1069:19286..25533+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1069.648.1 ID=mRNA_L-elsbetiae_contig1069.648.1|Name=mRNA_L-elsbetiae_contig1069.648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6248bp|location=Sequence derived from alignment at L-elsbetiae_contig1069:19286..25533+ (Laminarionema elsbetiae ELsaHSoW15)
GAGAGGACGGCCGACAGGAAGTGGCGTTCAACGCCACCTGAGCACGCCGT TTTGCATTTTATCATGTGTCTATCTCGATTTGAGATTTTGGACATCCGTC TGTCCTCGGCCTCGTGGATAACAAGCGGGAGGGATGCAGCCGCGACAACG GGTGCCAGCTTTCTGCGGTCCATACTTACCGGGGCTATGGTGGACTGCAG CACAGTGAGAAAAACCGGACAGGGCACGACTCTGTTGTTCCTCCTTCACG AGCACCCCCGGGAGAGTTCACTTTTTCTCCTACTCCCACCAGCCTCTCAA AGCGCGCTACTTGCAAGTGTGCTGCTACTCACCATGCGGAGGCAACAACT ACTATGTGGCCTCCTGAGCCTCTCACTGTGCGTCCTGGGCGCTGTGGGGC AGACTAACCCCGCACCCGTGCGGCCGCTACCCACCCCGGAGCCAACGCCT GGACCCACGAAAGAACCGACCCCGGGCCCAACGCCTGGGCCCACGGAAGC ACCTACCCCAGGGCCAACCAACACACCCACAGAGGCCCCAACGATTGGCC CCACAGAAGGTGAAGGGATATATCTGCCTTCTGGCCGTTGTCGGGAGACG GCTGGATTGTCTGTCTCTTGACAGCAGCCGTCACACACGGTGGGCTGGGC TAGATATGTTTAGATAATCGGTGAAGAATGCGTACACAGTAGTCTTGCTG GAAAACGAGAGACCAGTATCCTTCTCTTCATGCCCACCAATGCTGGAGCG TGCTGCATGTAGGATCCTGGTGAACTAAGCACCAAACTATGGTTGCCTCA TTCGCGCTCCGTGTGTGCCGGCCGCCCTTGCCTGATTGCTCGTCGCTTTC CCCCAGAACCCACGCCATCCCCGACGCCAGCACCAACATTGGCCCCGACA CCGTCTCCCACGCCAGCGCCAACTCTGAGCCCCACGCCGGGCCCGACCTT CAGCAAGGCTCCCACGCCCCCCCCCACACCGTCACCCACCCCCCCACCGA CATTCTCCTTCAGCAGTTTCTGTGAGAGGCCGTTCCCGTTTACCAACGAG AGCGCCCTGCCTTGCGGTGAGCTGAGCGCGCGGGCGAACAGTAGTAGTTA TGTACATGGTGGTAGATGCGTGTGTGTGTGGCTCCGGTGAAATGATTGAA TCCGTCGTGCATGGTGGCTTGGTCTGACGGACTCGGGCGCTGAATCGAAG CACCGCGAGGCCTTTTGGGCTTGTCTGGCGGTGTTGCGCTCAGTTCTCTG TTCGTTGGGCTACGCCGCTGCCATCATTCAGGGTCGACGGTGGCTACATC GGCAGCTTTTGCGCCGTGCGGCGTACCGGCGGTTCGAAATACCTCCTCTT ATGCTGCGTACGGCAACTCTCACGGAACGAAACTCCTAAATGTTCCGTGT GGTGCTGTGCATATATATTGTTGGTATGCATTTAAACTCGTCCTGTAGCG GGTCCACCCAACCCAACGAAGACGTGAAATGTATTGGCTAAGGCTGGCTT GACCCAGCGCTAAGTAAGGGTGCAAGAGTGCACATGAGCAGTGAGGGAGA AAGACGCGTGCATGGTAAAACTACTCGACCACTGCAGATTATTGCCGTCA TTACTAAGCAATTATTTCGTTCTACGCTTGCGCTCCGGCCCCATGTAGAA TGGTGTTCGATGAGCTAGGCGCAAAAATTAAATATTTTGGTCCGGGGTGT TGGCATTTTTTCGGTTCCGTGAGCACACAGAACCGATCGATTTAGCTCGC TGGCTTCGCTGAGGGGTTGCTCTCGACCAGCTGTGTCATAGAAATTTCGA AGCAGTTCGCTGCATATAGCAAGCATATTCCGACAGCTGCGTTGTCCATC TCCTATCCCAAAGAAGGGACATTTTAGAAGCCGAGAAAAAACACATAGCA AGCCTTTCAGTGCCTCGGCGGCGTACTAGGTACATAGCTTGGTTGTTCGA GGTACATATCCCGCGCAATTTTAGTGCTGCGTATCGTCTCTCCACTCGCA CACCTACTCAGGAAGCGGGAAGTTGCTTGGTACGTCTGCTAGATAGGAAA CCCGGGGAACAGAGAGAGCCGACAGAGCGGCCGGGTCGAGCACCCTTCGT CTGGTGCAGTTTATTCATGTTTAATGCGGTGACGAGGCCGCGGAAGGAAG AGCCTGTTCTACTTGCAACCCTCTGCAGGCCTTTCTTTCCTACTAGTATT ATTTATTTAACCTCTCTCTCTCTCATCAAAGCCCGATCACCAGACACTGA CGAAACGCCTCTCTTTGTGTCGTGGGGTGTGCAGTTGAGCTACCAACTGG GGAGGACAGGCAGAACGGGGTGGGTGCTTTCTACGATGAGGAGGGCTGCG CGTTGGAGCAGCAAAGCAGGAGCATCGTGGGCTGCAACCTTGGCGGGTGA GCAAATAATAGCAGTGGAGGATGTTTCAGCCAAAGCTCTTGTTTTTTTTG CTCGGAAATATCACTGCGACAGCAATCTCGGCGCGCAAGGGTCTGCGAGG GATTGCTGCTAATGAGCTATGCACAGGAGAAATCTTACTGCGAGAGAAAG AGCACCTTCTTCGATACCTCGTCCTCAAAATTGGACGCCATGTGTTGACT TAAAGCATGGTTTTTCCAGAAATCGACTCGCACTGCTCTGAACTTTTACA ACAACACACGCACGCGAAGACAGCCGGAGGAAAATGCCAGACTGAAGCAA AAGTATATCTTCGGTCGGTTGCCAAGAGAACGATGTATTACTGTTGTATC GCCGTTGGTTTTGATCGTTGCTTTGGAATGAAATGTACGAGGTGGGGCCC AGAAGACTGCGACCTGCTGAATTTTGAAGAATCTCTTCGAGAATTCGGTA CATAGATTGGGCACGCCGGGATGATGTCGTGCGACGTGGTGTGTACCAGA TGAAATCGAAAACGTGTCTAGACTATATACGTTCGATCTGAGACCTTCGA TAAATATGTAGCGCCACAAACTTCTGGGAAAACGTCCAAACCTACCCGCG CTAGATAAATAATGCTTCGACGTCATTGTTGACGAGGGTGGGGAGTGCTG AACCCTGCTCGCGATAAAAACATCTAAAGTAGGCACCGCAGGAGGGGGTC CAACCCCCCCCCTCCTGTATGACCCCGGTTGGGTCGTCTAGCTAGCCGTA GTGGAGGAAGGGGGATGATGGGGAGGAGGGGGGGAATCTACCAGAGGAGC GATGTTTTCATCTGTCCGTTCTGAAAAATCCAAAAAAATGTCTACGTTTT AGTTTTCCCTTCAAAACCGACCATCAACAACTTGTGAAACTTGTGAACAA TTGAAATTGATTAAACATTAACATGCACCTAGAAATACTTGTAGCTAAGT AAGCCTGTTCTTTCGTTCCTCAAACGCTTACCTGTTGTTTACTAGACCGA CGCGCGGCTCCTCCAACCCATACTTGCAAGCGTTCACGCGGCAGGGTTTT CCCGAGTAGAACGAGGGTCCCCAAACCCAAAACTGTGTGACAGAGTGTGG ACTCGTACTTATGTATCCGCTCTGCACAACCTTCGAACCCAGAGCAGCTG ATGGCGCTTGCTTGGGTCCTCTACCAGCCCCAGAAACCACCATCTGTCTC CCAGCGCTATCTTGCTGGTTATCTTCCCAGCCGCGCCAAACCATCGTGCA CTCTGGCTGCTTCGTTTTTGTTGCTTTGCTCATTGTTCCAGGGTCGCCAA CTGCAGGTTGTGTGTCTTCAACCGCGCACTTTTCAGCCAAGAAATCCTCG GCGGAGAGGAGGTGAGGAATACTCCGACCCTCCTATTCTACTGCATCATA GGAGGGGGTGTTCCTCGTGGAACCGAGCTCTCGCTGTTGCATGGCGGCTA GGTCTCGTCAACCCCTTTTGGCGAGCACGTCCCGTGCTGATGATCCCTAT CGTTGCGTTCCTTTTTGGGCCCCTTGTTCTCTTCCTGTGTGTTTTTGTGT ACCCTGTTCTATTCCAAATTAATCCAGTCCTTACCCCGTTCCACCCCCCG GCCCGACTCGAACTCCAAGTGCTTCTGACGACGCCAAATCCTAGGTCGTA CAATAGCGCGATTTCATCGGGGCACTCGAAGCCCCGAGCATGTTACACAG ATCGGGAGATGCATGCTGACCCCCCCCCCCCCCCCGTGTTTCTCGTGAAA TTATTAGGTGCCGTTCGTGAACTGCCCCTGCTGCGTGCCGGACACGTATC AGATGGGAGGGGATATCGACTGTGACTTTCTTTTCTCCTCAGCTCCCGTC TCCGCCCCACCACCCACGCCGTCTCCGACGGGGGCGCCGTTGGCCGAGCC TACTGTGGCTCCCGGAGCCACTACTGCGCCGCTGGAGGCGGGAGACAGGG CCGTGGACGTCGGAACGCCAGCACCTTCTGTTTCACCAGCGACGCTAGCC CCTACCATACCTCCGGTGAGTTTTTTTCTGCGGCTACGGTTCAGTACTCT GGCAAGATGTCCTCGTGACAGGGAACCCATCGAGCACTGGAAATAAATGT GAAGAAGGAAAAAAAAGAAAAAAAATGGATGTTGTTGTTGTTGTTGTTGT TGTTGTTGTCGTCGTAGTCATTGGCTGTCGTTACCGTTGTGGCTGTTCTA GCTGCGGTGTCGGTCTTTGCAGCCAGTGGTTCGTCACTCGAGCCTTTCGT GCTCGCCAGTATAGCTCCTCCTCCTGAGGCTGGCCGGGCTCACCAGAGCC CACGAGACTGTTATAGACACCAAACCAACCTCGGGATCAGGTCAGGTGCC AAGCTTCCTTGAACTCGACTTTGAAGATATCAAACGCCCGTCAACGTCCG GCTTCTTGTTTTGTCGGTGGGGCAGATTCCGACGGAGCCGTGCGAGATCG GCGCTGGGGGCGATACAACTGGCAACTCGACAGTTTGCGTGGACGTTGCA TCTCCGTTGGACTGGGAAAACGGTATCGGGGTAAGTGGGAGACCGAACAA CCTGAATAATAGGCAGTCCGTAGGCGAGGAAATCGTCTTCCACTCGACGA AAGCCCTGCGGCCTTCCTCGGCGTGCACTTTTGTTTTCTGTTTTTTGCAG TCCTGATGCATGCGGTTTTTCGCTTTTCATATATATATGCTCGTGCATGC CGCCTTTTGAATTCGTTTCGTGCTGGCTCTAATTTTAGACCTTCTACGAG CGAGGCTGCGCGGGGCTTGGCTGCGGCATCGCCGGGTTCGCGGACTGCCG ACAGTGCATCTTCGACGACGCAGCGTACGCAGCGGTGAGTCTGAATCAGG CGATATCCCCCTTAACTTCATTCAGTCACAGTGTCTCTTGAGACGCCGCA CTTGCAAGCCGAAAGAGGTAAGATTGTGGGGGCGCTAACTCTCGGTCTCG CTTCCAATGAGGATGTGTATTTGTTGGAATACGAAGTTTTCGGGCATTGG TAGGGGGCGAAAGTCGAGAGTATATCTATACCGTCAAGCCCACCTTCGTG TATATGTTTCTTGAGCTTAGATCGGGTCCCTGCAGTTGCTGACGATGTGT TTTCGGCGTGCTTCCCGAAACACGGCGAGTCGAGTGTTGCGTGTGCCCTT GGAGAATCGCGCTGGGCCTATGGAGACATGGATTGCGCATTTACTCAGTG GCTCAAACACAAAGGCAAAGTCGAGGCTCCCCTCAGTACACTCGTCCTGG GCTAACGCATCCGTGAGGCCAACGTGAGGGCTTACTTTGTGGTACAGACG CCCTTATCTGGTGGACCCCCCTCCTTTGCGCCACAAACAAATAGGGCGCA CTGACAAAAACGAACTTCCCGAATCCCCATTCGACCCTTATCCTTGCCTT GAGCGCCTCCACGCGCCAACCGACCTATTTTCCTTCTTCGATGCCGTGGT GGGACAAGCTAGAGCCAAAAAAGGGTCTTTACGCCGAGCCGTGCTGCGTA CCACCCCAAGCGCAACTGACTAATACAACACGAATCTTTGTAATCTTGCA CTTGACAAAAATATGTGGTAATTTACGTGCGGTGATTTTTTAATTTTCCC ACTCGTGCTGCCCCGCCGCCGCCCCCGTCGCCCCGGAACCCGTACGCGCG CTTGTCCTTCGGGCCTCCTGCGAAATCGGCACGCCGTCGAATTGCCCCAT CATAACATAGTCTGGAGGCACGGACGCTCTGGTGGAGTGTCCCTGTTGCG TGCCCATCACGTACAAGCTACGCCCGGAGGACTCGGAGTGCATCTGGCCC GCAACGCCGGCGCCGGTGAGCTTGGCAGGGAGCGGAGCCTCCCGCCCG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1069:19286..25533+

>mRNA_L-elsbetiae_contig1069.648.1 ID=mRNA_L-elsbetiae_contig1069.648.1|Name=mRNA_L-elsbetiae_contig1069.648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3096bp|location=Sequence derived from alignment at L-elsbetiae_contig1069:19286..25533+ (Laminarionema elsbetiae ELsaHSoW15)
GAGAGGACGGCCGACAGGAAGTGGCGTTCAACGCCACCTGAGCACGCCGT
TTTGCATTTTATCATGTGTCTATCTCGATTTGAGATTTTGGACATCCGTC
TGTCCTCGGCCTCGTGGATAACAAGCGGGAGGGATGCAGCCGCGACAACG
GGTGCCAGCTTTCTGCGGTCCATACTTACCGGGGCTATGGTGGACTGCAG
CACAGTGAGAAAAACCGGACAGGGCACGACTCTGTTGTTCCTCCTTCACG
AGCACCCCCGGGAGAGTTCACTTTTTCTCCTACTCCCACCAGCCTCTCAA
AGCGCGCTACTTGCAAGTGTGCTGCTACTCACCATGCGGAGGCAACAACT
ACTATGTGGCCTCCTGAGCCTCTCACTGTGCGTCCTGGGCGCTGTGGGGC
AGACTAACCCCGCACCCGTGCGGCCGCTACCCACCCCGGAGCCAACGCCT
GGACCCACGAAAGAACCGACCCCGGGCCCAACGCCTGGGCCCACGGAAGC
ACCTACCCCAGGGCCAACCAACACACCCACAGAGGCCCCAACGATTGGCC
CCACAGAAGGAGAGGACGGCCGACAGGAAGTGGCGTTCAACGCCACCTGA
GCACGCCGTTTTGCATTTTATCATGTGTCTATCTCGATTTGAGATTTTGG
ACATCCGTCTGTCCTCGGCCTCGTGGATAACAAGCGGGAGGGATGCAGCC
GCGACAACGGGTGCCAGCTTTCTGCGGTCCATACTTACCGGGGCTATGGT
GGACTGCAGCACAGTGAGAAAAACCGGACAGGGCACGACTCTGTTGTTCC
TCCTTCACGAGCACCCCCGGGAGAGTTCACTTTTTCTCCTACTCCCACCA
GCCTCTCAAAGCGCGCTACTTGCAAGTGTGCTGCTACTCACCATGCGGAG
GCAACAACTACTATGTGGCCTCCTGAGCCTCTCACTGTGCGTCCTGGGCG
CTGTGGGGCAGACTAACCCCGCACCCGTGCGGCCGCTACCCACCCCGGAG
CCAACGCCTGGACCCACGAAAGAACCGACCCCGGGCCCAACGCCTGGGCC
CACGGAAGCACCTACCCCAGGGCCAACCAACACACCCACAGAGGCCCCAA
CGATTGGCCCCACAGAAGAACCCACGCCATCCCCGACGCCAGCACCAACA
TTGGCCCCGACACCGTCTCCCACGCCAGCGCCAACTCTGAGCCCCACGCC
GGGCCCGACCTTCAGCAAGGCTCCCACGCCCCCCCCCACACCGTCACCCA
CCCCCCCACCGACATTCTCCTTCAGCAGTTTCTGTGAGAGGCCGTTCCCG
TTTACCAACGAGAGCGCCCTGCCTTGCGAACCCACGCCATCCCCGACGCC
AGCACCAACATTGGCCCCGACACCGTCTCCCACGCCAGCGCCAACTCTGA
GCCCCACGCCGGGCCCGACCTTCAGCAAGGCTCCCACGCCCCCCCCCACA
CCGTCACCCACCCCCCCACCGACATTCTCCTTCAGCAGTTTCTGTGAGAG
GCCGTTCCCGTTTACCAACGAGAGCGCCCTGCCTTGCGTTGAGCTACCAA
CTGGGGAGGACAGGCAGAACGGGGTGGGTGCTTTCTACGATGAGGAGGGC
TGCGCGTTGGAGCAGCAAAGCAGGAGCATCGTGGGCTGCAACCTTGGCGG
TTGAGCTACCAACTGGGGAGGACAGGCAGAACGGGGTGGGTGCTTTCTAC
GATGAGGAGGGCTGCGCGTTGGAGCAGCAAAGCAGGAGCATCGTGGGCTG
CAACCTTGGCGGGGTCGCCAACTGCAGGTTGTGTGTCTTCAACCGCGCAC
TTTTCAGCCAAGAAATCCTCGGCGGAGAGGAGGGTCGCCAACTGCAGGTT
GTGTGTCTTCAACCGCGCACTTTTCAGCCAAGAAATCCTCGGCGGAGAGG
AGGTGCCGTTCGTGAACTGCCCCTGCTGCGTGCCGGACACGTATCAGATG
GGAGGGGATATCGACTGTGACTTTCTTTTCTCCTCAGCTCCCGTCTCCGC
CCCACCACCCACGCCGTCTCCGACGGGGGCGCCGTTGGCCGAGCCTACTG
TGGCTCCCGGAGCCACTACTGCGCCGCTGGAGGCGGGAGACAGGGCCGTG
GACGTCGGAACGCCAGCACCTTCTGTTTCACCAGCGACGCTAGCCCCTAC
CATACCTCCGGTGCCGTTCGTGAACTGCCCCTGCTGCGTGCCGGACACGT
ATCAGATGGGAGGGGATATCGACTGTGACTTTCTTTTCTCCTCAGCTCCC
GTCTCCGCCCCACCACCCACGCCGTCTCCGACGGGGGCGCCGTTGGCCGA
GCCTACTGTGGCTCCCGGAGCCACTACTGCGCCGCTGGAGGCGGGAGACA
GGGCCGTGGACGTCGGAACGCCAGCACCTTCTGTTTCACCAGCGACGCTA
GCCCCTACCATACCTCCGATTCCGACGGAGCCGTGCGAGATCGGCGCTGG
GGGCGATACAACTGGCAACTCGACAGTTTGCGTGGACGTTGCATCTCCGT
TGGACTGGGAAAACGGTATCGGGATTCCGACGGAGCCGTGCGAGATCGGC
GCTGGGGGCGATACAACTGGCAACTCGACAGTTTGCGTGGACGTTGCATC
TCCGTTGGACTGGGAAAACGGTATCGGGACCTTCTACGAGCGAGGCTGCG
CGGGGCTTGGCTGCGGCATCGCCGGGTTCGCGGACTGCCGACAGTGCATC
TTCGACGACGCAGCGTACGCAGCGACCTTCTACGAGCGAGGCTGCGCGGG
GCTTGGCTGCGGCATCGCCGGGTTCGCGGACTGCCGACAGTGCATCTTCG
ACGACGCAGCGTACGCAGCGTCTGGAGGCACGGACGCTCTGGTGGAGTGT
CCCTGTTGCGTGCCCATCACGTACAAGCTACGCCCGGAGGACTCGGAGTG
CATCTGGCCCGCAACGCCGGCGCCGGTGAGCTTGGCAGGGAGCGGAGCCT
CCCGCCCGTCTGGAGGCACGGACGCTCTGGTGGAGTGTCCCTGTTGCGTG
CCCATCACGTACAAGCTACGCCCGGAGGACTCGGAGTGCATCTGGCCCGC
AACGCCGGCGCCGGTGAGCTTGGCAGGGAGCGGAGCCTCCCGCCCG
back to top