mRNA_L-elsbetiae_contig1052.507.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig1052.507.1
Unique Name	mRNA_L-elsbetiae_contig1052.507.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: D8LIL8_ECTSI (Nucleoside diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIL8_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 4.460e-113
Identity = 175/203 (86.21%), Postives = 184/203 (90.64%), Query Frame = 1

Query:   37 MMVKTLLFGLVAILPATLGFVVPTASSSVFARGNRVAHVSATTV--AVSRPTMGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 639
            MM KTLL GLV +LPA LGFV+PTASSS FARG+ VAHVSATT   AVSRPTM MERSYIMIKPDGVQRGLVG II+RFE+RGYKL  LKLKQADEALLK HYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLG TNPL SAPGTIRGDF LEV RNICHGSDSVENA+KEI LWFG++EVVDHESAM+DWIYE
Sbjct:    1 MMAKTLLCGLVTLLPAALGFVMPTASSSAFARGSGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVWRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A836CHD7_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD7_9STRA)

HSP 1 Score: 268 bits (686), Expect = 9.320e-85
Identity = 128/169 (75.74%), Postives = 148/169 (87.57%), Query Frame = 1

Query:  133 GNRVAHVSATTVAVSRPTMGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 639
            G +V H +AT+   ++ TM MERSYIMIKPDGVQRGLVG IISRFE+RGYKL A+KLKQADE LLK HY+DL  KPFFPKL+ YM+SGPVVCM WEGKDVVA GRKMLGATNPLESAPGTIRGDFSL+VGRNICHGSDSV++ ++E +LWF  +E+VD+ESA+KDWIYE
Sbjct:   24 GAQVQHRAATSSIQTQWTMAMERSYIMIKPDGVQRGLVGEIISRFEKRGYKLAAMKLKQADEDLLKEHYRDLASKPFFPKLMGYMLSGPVVCMCWEGKDVVAQGRKMLGATNPLESAPGTIRGDFSLDVGRNICHGSDSVDSGKRESELWFSPAEIVDNESALKDWIYE 192

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A7R9VG66_9STRA (Nucleoside diphosphate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VG66_9STRA)

HSP 1 Score: 245 bits (626), Expect = 4.410e-76
Identity = 116/157 (73.89%), Postives = 133/157 (84.71%), Query Frame = 1

Query:  169 AVSRPTMGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 639
            A S  +M MER+YIMIKPDGVQRG+VG I+SRFE +GY L A+K K A + LL+ HYKDLV+KPFFPKL  YM+SGPVVCM WEG++ V+ GRKMLGATNPLESAPGTIRGDF +EVGRNICHGSDSVENAEKEI LWF +SE++D ES  KDWIYE
Sbjct:   14 ASSSLSMAMERTYIMIKPDGVQRGIVGNIVSRFETKGYHLVAMKTKMASKELLEEHYKDLVEKPFFPKLRDYMLSGPVVCMVWEGREAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIGLWFEESEILDWESHSKDWIYE 170

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: B7FPE8_PHATC (Nucleoside diphosphate kinase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPE8_PHATC)

HSP 1 Score: 241 bits (616), Expect = 7.570e-75
Identity = 113/148 (76.35%), Postives = 128/148 (86.49%), Query Frame = 1

Query:  196 ERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 639
            ER+YIMIKPDG+QRG+VG I++RFE +GYKL A+K KQA   LL+THYKDLVDKPFFPKL  YM+SGPVV M WEGK+ V+ GRKMLGATNPLESAPGTIRGDF +EVGRNICHGSDSVENAEKEI LWF + E++D ES  KDWIYE
Sbjct:    5 ERTYIMIKPDGIQRGIVGNIVNRFETKGYKLVAMKTKQATSELLETHYKDLVDKPFFPKLKEYMMSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEEDEILDWESHSKDWIYE 152

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A7S3HYI0_9SPIT (Nucleoside diphosphate kinase (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3HYI0_9SPIT)

HSP 1 Score: 241 bits (616), Expect = 3.310e-74
Identity = 118/162 (72.84%), Postives = 134/162 (82.72%), Query Frame = 1

Query:  163 TVAVSR---PTMGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 639
            T AV+R   P M MER+YIMIKPDGVQR LVG II+RFEQRGY+L ALKL QADE LL+ HY DLV+KPFFPKLL+YM+SGPV CM W+G++ V MGR+MLGATNP ES PGTIRGDFS+EVGRNICHGSDS ENAEKEI LWF D E+V+ E    DW+YE
Sbjct:   34 TPAVARASAPLMAMERTYIMIKPDGVQRNLVGNIITRFEQRGYQLCALKLFQADEDLLREHYCDLVEKPFFPKLLSYMLSGPVTCMVWKGENAVKMGRQMLGATNPQESLPGTIRGDFSIEVGRNICHGSDSPENAEKEIALWFKDGEIVEWEDHSHDWVYE 195

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A7S2EER7_TRICV (Nucleoside diphosphate kinase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EER7_TRICV)

HSP 1 Score: 241 bits (616), Expect = 1.240e-73
Identity = 129/201 (64.18%), Postives = 142/201 (70.65%), Query Frame = 1

Query:   46 KTLLFGLVAILPATLGFVVPTASSSVFARGNRVAHVSATTVAVSRPT---MGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 639
            KT+ F   A+L        PT   S F          A  VA S  T   M MER+YIMIKPDGVQRG+VG I+SRFE +GY L ALK K A   LL  HYKDLVDKPFFPKL  YM+SGPVVCM WEGK+ V  GRKMLGATNPLESAPGTIRGDF +EVGRNICHGSDSVENAE+EI LWF +SEV++ E   KDWIYE
Sbjct:   39 KTVAFLYAALLAGAADAFAPT---STFVGRPAFTSAVAAPVAKSSATELSMAMERTYIMIKPDGVQRGIVGNILSRFESKGYHLVALKTKMATAELLDQHYKDLVDKPFFPKLRDYMLSGPVVCMVWEGKEAVTTGRKMLGATNPLESAPGTIRGDFCVEVGRNICHGSDSVENAEREIGLWFEESEVLEWEDHSKDWIYE 236

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: B8C642_THAPS (Nucleoside diphosphate kinase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C642_THAPS)

HSP 1 Score: 236 bits (602), Expect = 9.420e-73
Identity = 115/148 (77.70%), Postives = 126/148 (85.14%), Query Frame = 1

Query:  196 ERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 639
            ER+YIMIKPDGVQRG+VG IISRFE +GYKL ALK KQA + LL THY DLV+KPFFPKL  YM+SGPVV M WEGK+ VA GRKMLGATNPL S PGTIRGDF +EVGRNICHGSDSVENAEKEI LWF +SE++D ES  KDWIYE
Sbjct:    5 ERTYIMIKPDGVQRGIVGNIISRFETKGYKLVALKTKQATKELLDTHYCDLVEKPFFPKLRDYMMSGPVVSMIWEGKEAVATGRKMLGATNPLASEPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEESELLDWESHSKDWIYE 152

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A7S2YRX6_9STRA (Nucleoside diphosphate kinase n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX6_9STRA)

HSP 1 Score: 236 bits (602), Expect = 3.030e-72
Identity = 112/148 (75.68%), Postives = 126/148 (85.14%), Query Frame = 1

Query:  196 ERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 639
            ER+YIMIKPDGVQRGLVG I+SRFE +GYKL A+K KQAD  LL+ HY DLV+KPFFPKL  YM+SGPV CM WEGK+ V+ GRKMLGATNPLESAPGTIRGDF +EVGRNICHGSDSVENAEKEI LWF +SE+ + ES  + WIYE
Sbjct:   40 ERTYIMIKPDGVQRGLVGNIVSRFETKGYKLVAMKTKQADADLLEQHYIDLVEKPFFPKLKEYMLSGPVCCMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFDESELTEWESHSEGWIYE 187

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A1E7FT17_9STRA (Nucleoside diphosphate kinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FT17_9STRA)

HSP 1 Score: 235 bits (600), Expect = 4.040e-72
Identity = 110/148 (74.32%), Postives = 127/148 (85.81%), Query Frame = 1

Query:  196 ERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 639
            ER+YIMIKPDGVQRG+VG IISRFE +GYKL+A+K K+A + LL+THY DLV+KPFFPK+  YM+SGPVVCM WEGK+ V+ GRKMLGATNPLES PGTIRGD+ +EVGRNICHGSDSVENAEKEI LWF + EV+D     KDWIYE
Sbjct:   28 ERTYIMIKPDGVQRGIVGNIISRFETKGYKLSAMKTKEASKELLETHYSDLVEKPFFPKMRDYMMSGPVVCMVWEGKEAVSTGRKMLGATNPLESNPGTIRGDYCIEVGRNICHGSDSVENAEKEIALWFEEGEVMDWTCHSKDWIYE 175

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A7S0HS77_9EUKA (Nucleoside diphosphate kinase (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HS77_9EUKA)

HSP 1 Score: 235 bits (600), Expect = 7.130e-72
Identity = 113/148 (76.35%), Postives = 123/148 (83.11%), Query Frame = 1

Query:  196 ERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 639
            ER+YIMIKPDGVQRGLVG I  RFEQRGYKL ALKL QADEALLK HY DLV+KPFFP LLAYM+SGPV CM WEG + V +GR MLG TNP  S PG+IRGDFS+EVGRNICHGSDSVENAEKEI LWF D EV+D  S  KDW++E
Sbjct:   45 ERTYIMIKPDGVQRGLVGEITKRFEQRGYKLQALKLFQADEALLKAHYADLVEKPFFPSLLAYMMSGPVTCMVWEGTNAVKVGRMMLGETNPQASLPGSIRGDFSIEVGRNICHGSDSVENAEKEIKLWFKDGEVIDWTSHSKDWVHE 192

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIL8_ECTSI	4.460e-113	86.21	Nucleoside diphosphate kinase n=2 Tax=Ectocarpus T...	[more]
A0A836CHD7_9STRA	9.320e-85	75.74	Nucleoside diphosphate kinase n=1 Tax=Tribonema mi...	[more]
A0A7R9VG66_9STRA	4.410e-76	73.89	Nucleoside diphosphate kinase n=1 Tax=Pseudictyota...	[more]
B7FPE8_PHATC	7.570e-75	76.35	Nucleoside diphosphate kinase n=2 Tax=Phaeodactylu...	[more]
A0A7S3HYI0_9SPIT	3.310e-74	72.84	Nucleoside diphosphate kinase (Fragment) n=2 Tax=C...	[more]
A0A7S2EER7_TRICV	1.240e-73	64.18	Nucleoside diphosphate kinase n=1 Tax=Trieres chin...	[more]
B8C642_THAPS	9.420e-73	77.70	Nucleoside diphosphate kinase n=1 Tax=Thalassiosir...	[more]
A0A7S2YRX6_9STRA	3.030e-72	75.68	Nucleoside diphosphate kinase n=2 Tax=Amphiprora p...	[more]
A0A1E7FT17_9STRA	4.040e-72	74.32	Nucleoside diphosphate kinase n=1 Tax=Fragilariops...	[more]
A0A7S0HS77_9EUKA	7.130e-72	76.35	Nucleoside diphosphate kinase (Fragment) n=1 Tax=P...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1052	contig	L-elsbetiae_contig1052:5190..8836 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	344.4
Seed ortholog evalue	3.7e-92
Seed eggNOG ortholog	2880.D8LIL8
Preferred name	NME3
KEGG rclass	RC00002
KEGG ko	ko:K00940
KEGG Reaction	R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895
KEGG Pathway	ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016
KEGG Module	M00049,M00050,M00052,M00053
Hectar predicted targeting category	chloroplast
GOs	GO:0000166,GO:0000278,GO:0000287,GO:0000976,GO:0000977,GO:0001012,GO:0001067,GO:0001101,GO:0001667,GO:0001678,GO:0001726,GO:0001775,GO:0001882,GO:0001883,GO:0002009,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0002683,GO:0002761,GO:0002762,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003700,GO:0003824,GO:0004518,GO:0004536,GO:0004550,GO:0004672,GO:0004674,GO:0005488,GO:0005504,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005758,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005874,GO:0005880,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006183,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006241,GO:0006259,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006915,GO:0006928,GO:0006950,GO:0006955,GO:0006974,GO:0006979,GO:0007017,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0007229,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007424,GO:0007427,GO:0007589,GO:0007595,GO:0008017,GO:0008092,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008285,GO:0008289,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009148,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014070,GO:0014074,GO:0014075,GO:0015630,GO:0015631,GO:0015949,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016333,GO:0016334,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0016787,GO:0016788,GO:0017076,GO:0018105,GO:0018130,GO:0018193,GO:0018209,GO:0019001,GO:0019205,GO:0019215,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019725,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0019933,GO:0019935,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0022008,GO:0022607,GO:0022610,GO:0023052,GO:0030027,GO:0030141,GO:0030154,GO:0030554,GO:0030856,GO:0030858,GO:0030879,GO:0030900,GO:0031090,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031406,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032587,GO:0032940,GO:0033293,GO:0033500,GO:0033554,GO:0033574,GO:0033993,GO:0034284,GO:0034330,GO:0034332,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034774,GO:0035152,GO:0035556,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0036230,GO:0040011,GO:0042119,GO:0042127,GO:0042221,GO:0042278,GO:0042451,GO:0042455,GO:0042493,GO:0042592,GO:0042593,GO:0042802,GO:0042981,GO:0042995,GO:0043015,GO:0043021,GO:0043024,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043388,GO:0043412,GO:0043434,GO:0043565,GO:0043933,GO:0044085,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045055,GO:0045216,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045604,GO:0045606,GO:0045616,GO:0045618,GO:0045637,GO:0045638,GO:0045664,GO:0045666,GO:0045682,GO:0045684,GO:0045893,GO:0045935,GO:0045944,GO:0046036,GO:0046039,GO:0046051,GO:0046128,GO:0046129,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046683,GO:0046777,GO:0046872,GO:0046903,GO:0046939,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048729,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050678,GO:0050679,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050878,GO:0050896,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051254,GO:0051259,GO:0051591,GO:0051674,GO:0051716,GO:0051960,GO:0051962,GO:0055082,GO:0055086,GO:0060205,GO:0060255,GO:0060284,GO:0060322,GO:0060416,GO:0060429,GO:0060541,GO:0060548,GO:0061508,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070542,GO:0070887,GO:0071229,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071396,GO:0071398,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0072527,GO:0072528,GO:0080090,GO:0090130,GO:0090132,GO:0090304,GO:0090305,GO:0090407,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098590,GO:0098805,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0120025,GO:0120035,GO:0120038,GO:0140096,GO:0140097,GO:0140110,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901654,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1901701,GO:1902105,GO:1902106,GO:1902680,GO:1903506,GO:1903508,GO:1903706,GO:1903707,GO:1904813,GO:1990837,GO:2000026,GO:2000112,GO:2001141
EggNOG free text desc.	Nucleoside diphosphate kinase
EggNOG OGs	COG0105@1,KOG0888@2759
EC	2.7.4.6
COG Functional cat.	F
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko04131
Ec32 ortholog description	flagellar associated protein, nucleoside diphosphate kinase-like protein
Ec32 ortholog	Ec-11_004330.1
Exons	4
Model size	1490
Cds size	606
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1052.507.1	prot_L-elsbetiae_contig1052.507.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig1052 5226..7988 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815275.9236898-UTR-L-elsbetiae_contig1052:5189..5225	1622815275.9236898-UTR-L-elsbetiae_contig1052:5189..5225	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1052 5190..5225 +
1691682811.2186668-UTR-L-elsbetiae_contig1052:5189..5225	1691682811.2186668-UTR-L-elsbetiae_contig1052:5189..5225	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1052 5190..5225 +
1622815275.975413-UTR-L-elsbetiae_contig1052:7988..8836	1622815275.975413-UTR-L-elsbetiae_contig1052:7988..8836	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1052 7989..8836 +
1691682811.3712404-UTR-L-elsbetiae_contig1052:7988..8836	1691682811.3712404-UTR-L-elsbetiae_contig1052:7988..8836	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1052 7989..8836 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815275.9351685-CDS-L-elsbetiae_contig1052:5225..5428	1622815275.9351685-CDS-L-elsbetiae_contig1052:5225..5428	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1052 5226..5428 +
1691682811.3288472-CDS-L-elsbetiae_contig1052:5225..5428	1691682811.3288472-CDS-L-elsbetiae_contig1052:5225..5428	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1052 5226..5428 +
1622815275.9451272-CDS-L-elsbetiae_contig1052:6203..6305	1622815275.9451272-CDS-L-elsbetiae_contig1052:6203..6305	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1052 6204..6305 +
1691682811.3421738-CDS-L-elsbetiae_contig1052:6203..6305	1691682811.3421738-CDS-L-elsbetiae_contig1052:6203..6305	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1052 6204..6305 +
1622815275.9546337-CDS-L-elsbetiae_contig1052:7143..7318	1622815275.9546337-CDS-L-elsbetiae_contig1052:7143..7318	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1052 7144..7318 +
1691682811.351244-CDS-L-elsbetiae_contig1052:7143..7318	1691682811.351244-CDS-L-elsbetiae_contig1052:7143..7318	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1052 7144..7318 +
1622815275.9665334-CDS-L-elsbetiae_contig1052:7862..7988	1622815275.9665334-CDS-L-elsbetiae_contig1052:7862..7988	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1052 7863..7988 +
1691682811.3610184-CDS-L-elsbetiae_contig1052:7862..7988	1691682811.3610184-CDS-L-elsbetiae_contig1052:7862..7988	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1052 7863..7988 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig1052:5190..8836+
coding sequence from alignment at L-elsbetiae_contig1052:5190..8836+

protein sequence of mRNA_L-elsbetiae_contig1052.507.1

>prot_L-elsbetiae_contig1052.507.1 ID=prot_L-elsbetiae_contig1052.507.1|Name=mRNA_L-elsbetiae_contig1052.507.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MMVKTLLFGLVAILPATLGFVVPTASSSVFARGNRVAHVSATTVAVSRPT
MGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTH
YKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAP
GTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIY
E*

mRNA from alignment at L-elsbetiae_contig1052:5190..8836+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig1052.507.1 ID=mRNA_L-elsbetiae_contig1052.507.1|Name=mRNA_L-elsbetiae_contig1052.507.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3647bp|location=Sequence derived from alignment at L-elsbetiae_contig1052:5190..8836+ (Laminarionema elsbetiae ELsaHSoW15)
CCTGTCTGTTGTCTGTTGTGTACCACTCTCGCAAAGATGATGGTGAAGAC
TCTCCTGTTCGGCCTTGTGGCTATCCTCCCGGCCACTCTTGGTTTCGTTG
TCCCGACCGCCTCAAGCAGCGTCTTCGCGAGAGGCAACAGGGTCGCTCAT
GTTTCCGCAACGACCGTGGCTGTCTCGAGGCCGACGATGGGCATGGAGCG
CTCGTACATCATGATCAAGCCAGACGGCGTACAGCGGGGGTAAGAGTCGT
GGGTCGTAGGGGATAAAGCTGTTGCTAGTGTTGGATTCGTGGTATCTTGC
TCGCACTGCTTGCTGTGTACCTCTCCTCTGTCGTGCAACGTCAACCGAAC
ATCATTACGCTGCTGTGTCACCATGCTCATCTAGACTATCCAGTCTATGT
ACACCAATACAGCGGGATCACGTGCGACATCATCGCCTGAGTAGTTCGCT
AAACCGCTGCTGTTTTGCTGGCTGCGTGCTGACGCACACGCAGCCGCAGA
GTTATCATGTGATGTTTGCTGACTATATCTCCAGGCATTGTCTCTCTTTT
TCCCAACACGCGTCCACAACACGTTTCTCGCAATCTGATAAAAAGCATCG
CGCCCAGCAGATGAATATTTATCCCGACGTACCGAGGGCGATATCCGTGC
GAGAGCTGCGCCTGTCCGACTGCATTCACTCCTTGTGAAAATGATACATA
GTCCAACCTCGCGTTGGTGTTGATGATAACTTGGTGCCGTTTTGGGAGCC
GGAATTCCCTACAATATGTACCGTCATCTTTCCGGCCCTCATGATGAAAC
CATCGCAACAAACTGCCACTTGACATACATACCCACTACTGTGCAAAGCT
ACTGTGCAAAGCTACTGTGCATATGTATGATATGTACAACATGAGAGCCG
TAAACCGGACTGGGTGATGAACGAGAAGATCTTCGTTTCTTTCCTCGTGC
GTGCCCCATTTCCCTGTTTGCTTGCTTCATTCTGCTGGTCCCCGTCTATT
GCTGGCGAATGAAGGCTCGTGGGGACGATCATCTCTCGCTTCGAACAGCG
CGGCTACAAGCTGACGGCTCTCAAGCTCAAGCAGGCAGACGAGGCCCTGC
TCAAGACCCACTACAAGTGAGTGTTCTGCAAAGTACAGCACACGGCGCGG
TGCAGCCGGCGCGTTTTTGTAGGTACTGTTGTTGCGCACATGCGCACACC
TACTACTGTTGTTGCGCACATGCGCACACCATTGCAGCATGTATACTGCT
GCCGCGCGATAGAAACTAAAGACCTCACGAGCCCACACGCCTTCTTGCTT
TAATCGGGAGGGCCTTCCTGGAAACCACACCTCCAAAGCAGCACGCTACA
ATTAGCAAGACCCTCACACCTATTTACTGAGCTACTTTCCTGAGAAAGTG
GTGTATGCGTGCGCGCGCGGTTCGGAGGTACTTCTTGCCGAAGATGCTCT
CGTCTTGTCAACGATTTACGTCTTGTAAAATATCGGGGTGTCCGCGTATG
TCAGTAGCTCCAAGCTCAGTCCCACACCCCGTCCAGAAGGCCAGAGGACT
CTTGCCTAAATAAGTATGTATGTACACCCCGGCGGTCCGTCCCTAGGAAC
CGCTGAGACATGGTACGCCTGCGTGTAACGAAGGTGGGTGTGGTTTGTGT
GTATCATATTTACGCGCGAACGAACCAGTGGTGTTGATGGCTGGTGCACG
AGCGGAGCCCGATCGTGCAGGATGACCTGATTTGGGGAGCCCTTCCCCAT
CCCTTCCTTTCTTGAATCATACCATACGTGCTTTGGCCTCTGGCCAAGGT
GGAAAACATGAGCCCATGTAGGTGTCCGTATGCACTTGACCCCATATGGC
CGCAACACATTACAACGGTAGTCATGTGCTTCTATCCACATGGTTGTCCT
TGGGAGTGCCCGTTGTGAACCCCCCCCCCCCCCCCACACGTGCGGCTGGT
GTAGGGATCTCGTGGACAAGCCCTTCTTCCCCAAGCTGCTGGCCTACATG
ATCTCAGGCCCGGTGGTGTGCATGGCCTGGGAGGGGAAGGACGTCGTAGC
GATGGGGCGCAAGATGCTCGGCGCGACCAACCCGCTGGAGAGCGCACCCG
GCACCATCCGCGGGGACTTTTCCTTGGAGGTGTGTGTATGTATTGTAGGT
GGTTGGACGAACTCTGGCTGTTCACGTGTTGCGCGTATTTCTGAGCCCGT
CCCCAACCCCTGACTGTTTTTCGTTGACATCGGTACTCTTCTTCGACAGC
AGTAGATAACGGTTGGTCGGAGGACAAGGACCGTTTTTCAACGCCTCGCT
CGATGAGACTGTTTTTAGCAGCCGGGAGTTTGGCCATTTGGGGAAAAAAA
GAAGACAAACATTTCTTCTCTCACACCCGCTTGAACAACCCCGCCTATTT
GCCCGTGTACCGCCAGCCTCTTTCGTAAAACAGGAGTATTCAGTTGGGGG
CTCATCTCAAAGTGTACCGTCTGCCTCCTTCCAGCTGGAGCGTGCTTCAT
ATTTGGGCTATTTTGTTTTAATGTAATCCAAATTTCCTACTAAACGTCAG
CAGCCCCACATACGCCCGACCAGTGACAAAAGTCAGTGAAAAGGTCGTTA
TATTGTGTGTGTGTCTGAGTCGCCAGTTGCTTTCTTTTCGCTCCCCGCTC
TTGCGCTCCTTATTCGCGAGCAGGTGGGACGAAACATCTGCCACGGGTCT
GACTCCGTAGAGAACGCAGAGAAGGAAATCGACCTTTGGTTTGGAGACTC
CGAGGTAGTAGACCACGAGTCCGCCATGAAGGACTGGATCTACGAATAAA
TAAAAGAACAAAACTCTTAGGAGACTGCGAATAGGTTGTGTACTTTTTTT
AGTTTAGGGGCGGGGGGGGGCGGGAGTCAAAAATGCGTTCTCTCTGCGTG
ATCTACGTATACCTACCACATTCATAGAGTAGCAGAAACACGTGCAACAA
CAAAAAAACAAGAGTGCTTTTGGCGCAACGGCCCCCTCAAACCAAGGCCC
AAGTTTGTATTTTCCCTCGGTTGAGCTAGCAGGGCTGCAGCGTGTTTCGG
AACCGCCGGCCGCGCAGACAGATGGGTCTTTACCATCTCCTTTGCGTGCG
CGGCCGGCATCGTTTGACTTTTGCTTTGATTTAAAGCAAAGGAAGGCATT
GAAATCGTTTGCCTGTGTACCCCGCGGTGCCCCGGGGGTCCCGTTGTGTT
ACGTGTGGTGACGAGTGATGTGCGGGCGCCTTTTGACGAGTGCTCGTGAA
AGGCTTTTGAGGGGTGGCTGGTGATACGCCCCTAGGGGTGGGTGATTCGC
CAGCATAATTTTCCAGCAACGCTTGACGGTTTTGCACGAGGAGGTGCTCC
TTTTTTGGGAGTAATTAGGAGTTTTGGGCAACAAATAAAGAAAAAAATAG
GAACCAATCATTTTTTCGGTGAATGATAAGGACGCTGAATTAGTGGACGG
TAGAGTCCGGCAGTTTGTTGTTGTCTTCATTTTAAGTTTACGGGAGAGCT
TGGAGTGCTGCACGAGAGCTGACTATTTAATTCCTGGCCTTGAGACTTGG
CAGGTTTGCGAACCTTAACCCTTGGCGATGTAGCGTAGTAAGGATGCACA
AGTCGACGAGGGGATGGCGCTTGCGGGGCTCTGAGTAAAAACCGGAG

Coding sequence (CDS) from alignment at L-elsbetiae_contig1052:5190..8836+

>mRNA_L-elsbetiae_contig1052.507.1 ID=mRNA_L-elsbetiae_contig1052.507.1|Name=mRNA_L-elsbetiae_contig1052.507.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig1052:5190..8836+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGGTGAAGACTCTCCTGTTCGGCCTTGTGGCTATCCTCCCGGCCAC
TCTTGGTTTCGTTGTCCCGACCGCCTCAAGCAGCGTCTTCGCGAGAGGCA
ACAGGGTCGCTCATGTTTCCGCAACGACCGTGGCTGTCTCGAGGCCGACG
ATGGGCATGGAGCGCTCGTACATCATGATCAAGCCAGACGGCGTACAGCG
GGGATGATGGTGAAGACTCTCCTGTTCGGCCTTGTGGCTATCCTCCCGGC
CACTCTTGGTTTCGTTGTCCCGACCGCCTCAAGCAGCGTCTTCGCGAGAG
GCAACAGGGTCGCTCATGTTTCCGCAACGACCGTGGCTGTCTCGAGGCCG
ACGATGGGCATGGAGCGCTCGTACATCATGATCAAGCCAGACGGCGTACA
GCGGGGGCTCGTGGGGACGATCATCTCTCGCTTCGAACAGCGCGGCTACA
AGCTGACGGCTCTCAAGCTCAAGCAGGCAGACGAGGCCCTGCTCAAGACC
CACTACAAGCTCGTGGGGACGATCATCTCTCGCTTCGAACAGCGCGGCTA
CAAGCTGACGGCTCTCAAGCTCAAGCAGGCAGACGAGGCCCTGCTCAAGA
CCCACTACAAGGATCTCGTGGACAAGCCCTTCTTCCCCAAGCTGCTGGCC
TACATGATCTCAGGCCCGGTGGTGTGCATGGCCTGGGAGGGGAAGGACGT
CGTAGCGATGGGGCGCAAGATGCTCGGCGCGACCAACCCGCTGGAGAGCG
CACCCGGCACCATCCGCGGGGACTTTTCCTTGGAGGGATCTCGTGGACAA
GCCCTTCTTCCCCAAGCTGCTGGCCTACATGATCTCAGGCCCGGTGGTGT
GCATGGCCTGGGAGGGGAAGGACGTCGTAGCGATGGGGCGCAAGATGCTC
GGCGCGACCAACCCGCTGGAGAGCGCACCCGGCACCATCCGCGGGGACTT
TTCCTTGGAGGTGGGACGAAACATCTGCCACGGGTCTGACTCCGTAGAGA
ACGCAGAGAAGGAAATCGACCTTTGGTTTGGAGACTCCGAGGTAGTAGAC
CACGAGTCCGCCATGAAGGACTGGATCTACGAATAAGTGGGACGAAACAT
CTGCCACGGGTCTGACTCCGTAGAGAACGCAGAGAAGGAAATCGACCTTT
GGTTTGGAGACTCCGAGGTAGTAGACCACGAGTCCGCCATGAAGGACTGG
ATCTACGAATAA