prot_L-elsbetiae_contig1052.507.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1052.507.1
Unique Name	prot_L-elsbetiae_contig1052.507.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	202

Homology

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: D8LIL8_ECTSI (Nucleoside diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIL8_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 1.540e-117
Identity = 175/203 (86.21%), Postives = 184/203 (90.64%), Query Frame = 0

Query:    1 MMVKTLLFGLVAILPATLGFVVPTASSSVFARGNRVAHVSATTV--AVSRPTMGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 201
            MM KTLL GLV +LPA LGFV+PTASSS FARG+ VAHVSATT   AVSRPTM MERSYIMIKPDGVQRGLVG II+RFE+RGYKL  LKLKQADEALLK HYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLG TNPL SAPGTIRGDF LEV RNICHGSDSVENA+KEI LWFG++EVVDHESAM+DWIYE
Sbjct:    1 MMAKTLLCGLVTLLPAALGFVMPTASSSAFARGSGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVWRNICHGSDSVENADKEIALWFGEAEVVDHESAMQDWIYE 203

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A836CHD7_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD7_9STRA)

HSP 1 Score: 268 bits (686), Expect = 4.500e-89
Identity = 128/169 (75.74%), Postives = 148/169 (87.57%), Query Frame = 0

Query:   33 GNRVAHVSATTVAVSRPTMGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 201
            G +V H +AT+   ++ TM MERSYIMIKPDGVQRGLVG IISRFE+RGYKL A+KLKQADE LLK HY+DL  KPFFPKL+ YM+SGPVVCM WEGKDVVA GRKMLGATNPLESAPGTIRGDFSL+VGRNICHGSDSV++ ++E +LWF  +E+VD+ESA+KDWIYE
Sbjct:   24 GAQVQHRAATSSIQTQWTMAMERSYIMIKPDGVQRGLVGEIISRFEKRGYKLAAMKLKQADEDLLKEHYRDLASKPFFPKLMGYMLSGPVVCMCWEGKDVVAQGRKMLGATNPLESAPGTIRGDFSLDVGRNICHGSDSVDSGKRESELWFSPAEIVDNESALKDWIYE 192

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A7R9VG66_9STRA (Nucleoside diphosphate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VG66_9STRA)

HSP 1 Score: 245 bits (626), Expect = 2.890e-80
Identity = 116/157 (73.89%), Postives = 133/157 (84.71%), Query Frame = 0

Query:   45 AVSRPTMGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 201
            A S  +M MER+YIMIKPDGVQRG+VG I+SRFE +GY L A+K K A + LL+ HYKDLV+KPFFPKL  YM+SGPVVCM WEG++ V+ GRKMLGATNPLESAPGTIRGDF +EVGRNICHGSDSVENAEKEI LWF +SE++D ES  KDWIYE
Sbjct:   14 ASSSLSMAMERTYIMIKPDGVQRGIVGNIVSRFETKGYHLVAMKTKMASKELLEEHYKDLVEKPFFPKLRDYMLSGPVVCMVWEGREAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIGLWFEESEILDWESHSKDWIYE 170

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: B7FPE8_PHATC (Nucleoside diphosphate kinase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPE8_PHATC)

HSP 1 Score: 241 bits (616), Expect = 5.240e-79
Identity = 113/148 (76.35%), Postives = 128/148 (86.49%), Query Frame = 0

Query:   54 ERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 201
            ER+YIMIKPDG+QRG+VG I++RFE +GYKL A+K KQA   LL+THYKDLVDKPFFPKL  YM+SGPVV M WEGK+ V+ GRKMLGATNPLESAPGTIRGDF +EVGRNICHGSDSVENAEKEI LWF + E++D ES  KDWIYE
Sbjct:    5 ERTYIMIKPDGIQRGIVGNIVNRFETKGYKLVAMKTKQATSELLETHYKDLVDKPFFPKLKEYMMSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEEDEILDWESHSKDWIYE 152

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A7S3HYI0_9SPIT (Nucleoside diphosphate kinase (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3HYI0_9SPIT)

HSP 1 Score: 241 bits (616), Expect = 2.290e-78
Identity = 118/162 (72.84%), Postives = 134/162 (82.72%), Query Frame = 0

Query:   43 TVAVSR---PTMGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 201
            T AV+R   P M MER+YIMIKPDGVQR LVG II+RFEQRGY+L ALKL QADE LL+ HY DLV+KPFFPKLL+YM+SGPV CM W+G++ V MGR+MLGATNP ES PGTIRGDFS+EVGRNICHGSDS ENAEKEI LWF D E+V+ E    DW+YE
Sbjct:   34 TPAVARASAPLMAMERTYIMIKPDGVQRNLVGNIITRFEQRGYQLCALKLFQADEDLLREHYCDLVEKPFFPKLLSYMLSGPVTCMVWKGENAVKMGRQMLGATNPQESLPGTIRGDFSIEVGRNICHGSDSPENAEKEIALWFKDGEIVEWEDHSHDWVYE 195

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A7S2EER7_TRICV (Nucleoside diphosphate kinase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EER7_TRICV)

HSP 1 Score: 241 bits (616), Expect = 8.570e-78
Identity = 120/172 (69.77%), Postives = 134/172 (77.91%), Query Frame = 0

Query:   35 RVAHVSATTVAVSRPT-----MGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 201
            R A  SA    V++ +     M MER+YIMIKPDGVQRG+VG I+SRFE +GY L ALK K A   LL  HYKDLVDKPFFPKL  YM+SGPVVCM WEGK+ V  GRKMLGATNPLESAPGTIRGDF +EVGRNICHGSDSVENAE+EI LWF +SEV++ E   KDWIYE
Sbjct:   65 RPAFTSAVAAPVAKSSATELSMAMERTYIMIKPDGVQRGIVGNILSRFESKGYHLVALKTKMATAELLDQHYKDLVDKPFFPKLRDYMLSGPVVCMVWEGKEAVTTGRKMLGATNPLESAPGTIRGDFCVEVGRNICHGSDSVENAEREIGLWFEESEVLEWEDHSKDWIYE 236

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: B8C642_THAPS (Nucleoside diphosphate kinase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C642_THAPS)

HSP 1 Score: 236 bits (602), Expect = 7.080e-77
Identity = 115/148 (77.70%), Postives = 126/148 (85.14%), Query Frame = 0

Query:   54 ERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 201
            ER+YIMIKPDGVQRG+VG IISRFE +GYKL ALK KQA + LL THY DLV+KPFFPKL  YM+SGPVV M WEGK+ VA GRKMLGATNPL S PGTIRGDF +EVGRNICHGSDSVENAEKEI LWF +SE++D ES  KDWIYE
Sbjct:    5 ERTYIMIKPDGVQRGIVGNIISRFETKGYKLVALKTKQATKELLDTHYCDLVEKPFFPKLRDYMMSGPVVSMIWEGKEAVATGRKMLGATNPLASEPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEESELLDWESHSKDWIYE 152

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A7S2YRX6_9STRA (Nucleoside diphosphate kinase n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX6_9STRA)

HSP 1 Score: 236 bits (602), Expect = 2.280e-76
Identity = 112/148 (75.68%), Postives = 126/148 (85.14%), Query Frame = 0

Query:   54 ERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 201
            ER+YIMIKPDGVQRGLVG I+SRFE +GYKL A+K KQAD  LL+ HY DLV+KPFFPKL  YM+SGPV CM WEGK+ V+ GRKMLGATNPLESAPGTIRGDF +EVGRNICHGSDSVENAEKEI LWF +SE+ + ES  + WIYE
Sbjct:   40 ERTYIMIKPDGVQRGLVGNIVSRFETKGYKLVAMKTKQADADLLEQHYIDLVEKPFFPKLKEYMLSGPVCCMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFDESELTEWESHSEGWIYE 187

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A1E7FT17_9STRA (Nucleoside diphosphate kinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FT17_9STRA)

HSP 1 Score: 235 bits (600), Expect = 3.080e-76
Identity = 110/148 (74.32%), Postives = 127/148 (85.81%), Query Frame = 0

Query:   54 ERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 201
            ER+YIMIKPDGVQRG+VG IISRFE +GYKL+A+K K+A + LL+THY DLV+KPFFPK+  YM+SGPVVCM WEGK+ V+ GRKMLGATNPLES PGTIRGD+ +EVGRNICHGSDSVENAEKEI LWF + EV+D     KDWIYE
Sbjct:   28 ERTYIMIKPDGVQRGIVGNIISRFETKGYKLSAMKTKEASKELLETHYSDLVEKPFFPKMRDYMMSGPVVCMVWEGKEAVSTGRKMLGATNPLESNPGTIRGDYCIEVGRNICHGSDSVENAEKEIALWFEEGEVMDWTCHSKDWIYE 175

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BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Match: A0A7S0HS77_9EUKA (Nucleoside diphosphate kinase (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HS77_9EUKA)

HSP 1 Score: 235 bits (600), Expect = 5.420e-76
Identity = 113/148 (76.35%), Postives = 123/148 (83.11%), Query Frame = 0

Query:   54 ERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAPGTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIYE 201
            ER+YIMIKPDGVQRGLVG I  RFEQRGYKL ALKL QADEALLK HY DLV+KPFFP LLAYM+SGPV CM WEG + V +GR MLG TNP  S PG+IRGDFS+EVGRNICHGSDSVENAEKEI LWF D EV+D  S  KDW++E
Sbjct:   45 ERTYIMIKPDGVQRGLVGEITKRFEQRGYKLQALKLFQADEALLKAHYADLVEKPFFPSLLAYMMSGPVTCMVWEGTNAVKVGRMMLGETNPQASLPGSIRGDFSIEVGRNICHGSDSVENAEKEIKLWFKDGEVIDWTSHSKDWVHE 192

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1052.507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIL8_ECTSI	1.540e-117	86.21	Nucleoside diphosphate kinase n=2 Tax=Ectocarpus T...	[more]
A0A836CHD7_9STRA	4.500e-89	75.74	Nucleoside diphosphate kinase n=1 Tax=Tribonema mi...	[more]
A0A7R9VG66_9STRA	2.890e-80	73.89	Nucleoside diphosphate kinase n=1 Tax=Pseudictyota...	[more]
B7FPE8_PHATC	5.240e-79	76.35	Nucleoside diphosphate kinase n=2 Tax=Phaeodactylu...	[more]
A0A7S3HYI0_9SPIT	2.290e-78	72.84	Nucleoside diphosphate kinase (Fragment) n=2 Tax=C...	[more]
A0A7S2EER7_TRICV	8.570e-78	69.77	Nucleoside diphosphate kinase n=1 Tax=Trieres chin...	[more]
B8C642_THAPS	7.080e-77	77.70	Nucleoside diphosphate kinase n=1 Tax=Thalassiosir...	[more]
A0A7S2YRX6_9STRA	2.280e-76	75.68	Nucleoside diphosphate kinase n=2 Tax=Amphiprora p...	[more]
A0A1E7FT17_9STRA	3.080e-76	74.32	Nucleoside diphosphate kinase n=1 Tax=Fragilariops...	[more]
A0A7S0HS77_9EUKA	5.420e-76	76.35	Nucleoside diphosphate kinase (Fragment) n=1 Tax=P...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001564	Nucleoside diphosphate kinase	PRINTS	PR01243	NUCDPKINASE	coord: 164..183 score: 68.39 coord: 100..119 score: 51.05 coord: 141..157 score: 74.38 coord: 56..78 score: 68.3 coord: 120..137 score: 59.5
IPR001564	Nucleoside diphosphate kinase	HAMAP	MF_00451	NDP_kinase	coord: 53..188 score: 32.734
IPR034907	Nucleoside diphosphate kinase-like domain	SMART	SM00562	ndk_5	coord: 53..190 e-value: 2.4E-84 score: 296.2
IPR034907	Nucleoside diphosphate kinase-like domain	PFAM	PF00334	NDK	coord: 54..187 e-value: 1.2E-51 score: 174.3
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	GENE3D	3.30.70.141		coord: 51..201 e-value: 6.7E-62 score: 209.6
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	SUPERFAMILY	54919	Nucleoside diphosphate kinase, NDK	coord: 51..201
None	No IPR available	PANTHER	PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	coord: 39..201
None	No IPR available	PANTHER	PTHR11349:SF44	NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC	coord: 39..201
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..201
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.876
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR023005	Nucleoside diphosphate kinase, active site	PROSITE	PS00469	NDP_KINASES	coord: 164..172

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1052	contig	L-elsbetiae_contig1052:5226..7988 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1052.507.1	mRNA_L-elsbetiae_contig1052.507.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1052 5190..8836 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1052.507.1 ID=prot_L-elsbetiae_contig1052.507.1|Name=mRNA_L-elsbetiae_contig1052.507.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MMVKTLLFGLVAILPATLGFVVPTASSSVFARGNRVAHVSATTVAVSRPT
MGMERSYIMIKPDGVQRGLVGTIISRFEQRGYKLTALKLKQADEALLKTH
YKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGATNPLESAP
GTIRGDFSLEVGRNICHGSDSVENAEKEIDLWFGDSEVVDHESAMKDWIY
E*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001564	Nucleoside_diP_kinase
IPR034907	NDK-like_dom
IPR036850	NDK-like_dom_sf
IPR023005	Nucleoside_diP_kinase_AS