mRNA_L-elsbetiae_contig10450.448.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10450.448.1
Unique NamemRNA_L-elsbetiae_contig10450.448.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: D7FKE1_ECTSI (AP-1 complex subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE1_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 3.260e-71
Identity = 121/130 (93.08%), Postives = 124/130 (95.38%), Query Frame = 1 
Query:    7 QEPNIRYLGLEVMSRLARLEGNETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 396
            +EPNIRYLGLEVMSRLARLEGNETAKKHQ TVLMSLKDADISIRRRALDLLFVMADETNGA IVEELVTYL +SGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIA+AGD V  AVWHRIIQIVTNH
Sbjct:  349 KEPNIRYLGLEVMSRLARLEGNETAKKHQATVLMSLKDADISIRRRALDLLFVMADETNGAEIVEELVTYLAASGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIAVAGDSVAGAVWHRIIQIVTNH 478
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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A6H5L7E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E0_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 5.650e-69
Identity = 121/130 (93.08%), Postives = 124/130 (95.38%), Query Frame = 1 
Query:    7 QEPNIRYLGLEVMSRLARLEGNETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 396
            +EPNIRYLGLEVMSRLARLEGNETAKKHQ TVLMSLKDADISIRRRALDLLFVMADETNGA IVEELVTYL +SGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIA+AGD V  AVWHRIIQIVTNH
Sbjct:  353 KEPNIRYLGLEVMSRLARLEGNETAKKHQATVLMSLKDADISIRRRALDLLFVMADETNGAEIVEELVTYLAASGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIAVAGDSVAGAVWHRIIQIVTNH 482
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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A836C8G3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.250e-55
Identity = 96/130 (73.85%), Postives = 113/130 (86.92%), Query Frame = 1 
Query:    7 QEPNIRYLGLEVMSRLARLEGNETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 396
            +EPNIRYLGLE MSRLARLEGNE+ K+H+ TV++SLKDADIS+RRRALDLLFV++D  N   IVEEL+ YL  S AAIREEMVLKIAILAEKFT+DL WYVD +L+MI++AGD VG  VWHRI+QIVTN+
Sbjct:  375 KEPNIRYLGLETMSRLARLEGNESIKRHKATVMVSLKDADISMRRRALDLLFVISDRDNAVEIVEELMAYLALSDAAIREEMVLKIAILAEKFTNDLRWYVDTVLQMISIAGDHVGAEVWHRIVQIVTNN 504
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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A7S2PNC4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PNC4_9STRA)

HSP 1 Score: 178 bits (451), Expect = 6.000e-50
Identity = 88/133 (66.17%), Postives = 112/133 (84.21%), Query Frame = 1 
Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 396
            S +EPNIRYLGL  M+RLA+LEG+ ++ KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N   IV+ELV +L ++ AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V +++WHR++QIVTNH
Sbjct:   69 SVREPNIRYLGLMTMARLAQLEGSGQSVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAEQIVDELVAHLVNADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDSIWHRVVQIVTNH 201
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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: B7FY75_PHATC (AP-2 complex subunit alpha n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY75_PHATC)

HSP 1 Score: 178 bits (452), Expect = 2.070e-49
Identity = 88/133 (66.17%), Postives = 112/133 (84.21%), Query Frame = 1 
Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 396
            S +EPNIRYLGL  M++LA+LEG+ E+ KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N  +IV+EL+ +L  + AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V +A+WHR++QIVTNH
Sbjct:  396 SVREPNIRYLGLMTMAKLAQLEGSAESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAELIVDELIGHLALADAAIREEMVLKIAILAEKYATDLRWYVDSILKLISISGDNVSDAIWHRVVQIVTNH 528
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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A7S2ULM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULM5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.360e-49
Identity = 88/133 (66.17%), Postives = 108/133 (81.20%), Query Frame = 1 
Query:    1 SPQEPNIRYLGLEVMSRLARLE-GNETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 396
            S +EPNIRYLGL  M+RLA++E   E  KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N   IV+ELV +L  + AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V +A+WHR++QIVTNH
Sbjct:  366 SVREPNIRYLGLMTMARLAQIETSGEGIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVVADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVNDAIWHRVVQIVTNH 498
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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A1Z5K119_FISSO (AP-2 complex subunit alpha n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K119_FISSO)

HSP 1 Score: 177 bits (449), Expect = 5.350e-49
Identity = 89/133 (66.92%), Postives = 111/133 (83.46%), Query Frame = 1 
Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 396
            S +EPNIRYLGL  M++LA+LEG+ E+ KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N   IV+ELV +L  + AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V +A+WHR++QIVTNH
Sbjct:  418 SVREPNIRYLGLMTMAKLAQLEGSGESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVIADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDAIWHRVVQIVTNH 550
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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A7S1BCA8_9STRA (AP-2 complex subunit alpha n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCA8_9STRA)

HSP 1 Score: 177 bits (448), Expect = 6.970e-49
Identity = 89/133 (66.92%), Postives = 110/133 (82.71%), Query Frame = 1 
Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 396
            S +EPNIRYLGL  M+RLA+LEG+ E+ KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N   IV ELV YL  + AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V +++WHR++QIVTN+
Sbjct:  340 SVREPNIRYLGLMTMARLAQLEGSAESVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAEKIVNELVVYLTVADAAIREEMVLKIAILAEKYATDLKWYVDTILKLISISGDHVSDSIWHRVVQIVTNN 472
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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: K0R582_THAOC (AP-2 complex subunit alpha n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R582_THAOC)

HSP 1 Score: 176 bits (445), Expect = 1.860e-48
Identity = 86/133 (64.66%), Postives = 112/133 (84.21%), Query Frame = 1 
Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 396
            S +EPNIRYLGL  M++LA++EG+ E AKKHQ TVL+SLKDADIS+RRRALDLLFV+ D  N   +V+ELV +L  + A+IREEMVLKIAILAEK+  DL WYVD +L++I++AGD+V +++WHR++QIVTNH
Sbjct:  363 SVREPNIRYLGLMTMAKLAQIEGSVEGAKKHQATVLVSLKDADISVRRRALDLLFVICDTDNAERVVDELVAHLVVADASIREEMVLKIAILAEKYATDLRWYVDTILKLISIAGDYVSDSIWHRVVQIVTNH 495
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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A7S2WLX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLX7_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.050e-48
Identity = 88/133 (66.17%), Postives = 109/133 (81.95%), Query Frame = 1 
Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 396
            S +EPNIRYLGL  M++LA+LEG+ E  KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N   IV+ELV +L  + AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V + +WHR++QIVTNH
Sbjct:  389 SVREPNIRYLGLMTMAKLAQLEGSAEGVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNSERIVDELVAHLVLADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDPIWHRVVQIVTNH 521
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKE1_ECTSI3.260e-7193.08AP-1 complex subunit gamma n=1 Tax=Ectocarpus sili... [more]
A0A6H5L7E0_9PHAE5.650e-6993.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8G3_9STRA1.250e-5573.85AP-1 complex subunit gamma n=1 Tax=Tribonema minus... [more]
A0A7S2PNC4_9STRA6.000e-5066.17Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7FY75_PHATC2.070e-4966.17AP-2 complex subunit alpha n=3 Tax=Phaeodactylum t... [more]
A0A7S2ULM5_9STRA2.360e-4966.17Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A1Z5K119_FISSO5.350e-4966.92AP-2 complex subunit alpha n=2 Tax=Fistulifera sol... [more]
A0A7S1BCA8_9STRA6.970e-4966.92AP-2 complex subunit alpha n=1 Tax=Corethron hystr... [more]
K0R582_THAOC1.860e-4864.66AP-2 complex subunit alpha n=1 Tax=Thalassiosira o... [more]
A0A7S2WLX7_9STRA2.050e-4866.17Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10450contigL-elsbetiae_contig10450:5108..6820 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score232.6
Seed ortholog evalue1e-58
Seed eggNOG ortholog2880.D7FKE1
Preferred nameAP2A2
KEGG koko:K11824
KEGG Pathwayko04144,ko04721,ko04961,ko05016,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000278,GO:0000281,GO:0000323,GO:0000331,GO:0000910,GO:0001775,GO:0002064,GO:0002065,GO:0002066,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0002682,GO:0003006,GO:0003674,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005798,GO:0005829,GO:0005886,GO:0005905,GO:0005938,GO:0006109,GO:0006807,GO:0006810,GO:0006884,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006897,GO:0006898,GO:0006950,GO:0006955,GO:0006970,GO:0006971,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007399,GO:0008021,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0008356,GO:0008361,GO:0008565,GO:0009056,GO:0009057,GO:0009628,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009992,GO:0010008,GO:0010324,GO:0010556,GO:0010558,GO:0010605,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0012510,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016055,GO:0016192,GO:0016323,GO:0016324,GO:0016482,GO:0019222,GO:0019538,GO:0019725,GO:0019882,GO:0019884,GO:0019886,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023052,GO:0030100,GO:0030104,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030122,GO:0030125,GO:0030128,GO:0030130,GO:0030131,GO:0030132,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030140,GO:0030141,GO:0030154,GO:0030163,GO:0030175,GO:0030276,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030665,GO:0030666,GO:0030667,GO:0030669,GO:0030674,GO:0030707,GO:0030855,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031344,GO:0031346,GO:0031410,GO:0031982,GO:0032153,GO:0032433,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032535,GO:0032794,GO:0032799,GO:0032801,GO:0032802,GO:0032879,GO:0032881,GO:0032885,GO:0032940,GO:0032991,GO:0033036,GO:0034381,GO:0034383,GO:0034613,GO:0034622,GO:0035091,GO:0035567,GO:0035615,GO:0036019,GO:0036020,GO:0036062,GO:0036090,GO:0036230,GO:0036465,GO:0038024,GO:0042119,GO:0042592,GO:0042734,GO:0042886,GO:0042995,GO:0043112,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043255,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045177,GO:0045184,GO:0045202,GO:0045321,GO:0045334,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045807,GO:0045912,GO:0046903,GO:0046907,GO:0048002,GO:0048013,GO:0048193,GO:0048259,GO:0048260,GO:0048268,GO:0048468,GO:0048475,GO:0048477,GO:0048488,GO:0048489,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050690,GO:0050750,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051285,GO:0051286,GO:0051301,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051716,GO:0051960,GO:0051962,GO:0055082,GO:0060071,GO:0060090,GO:0060255,GO:0060284,GO:0060429,GO:0060627,GO:0061024,GO:0061640,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0070325,GO:0070382,GO:0070727,GO:0070820,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072583,GO:0080090,GO:0090066,GO:0090175,GO:0097006,GO:0097060,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0097718,GO:0098588,GO:0098590,GO:0098657,GO:0098748,GO:0098793,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0098858,GO:0099003,GO:0099024,GO:0099503,GO:0099504,GO:0099568,GO:0099738,GO:0101002,GO:0101003,GO:0120025,GO:0120035,GO:0120038,GO:0198738,GO:1900125,GO:1900126,GO:1901532,GO:1901564,GO:1901565,GO:1901575,GO:1902036,GO:1902410,GO:1903047,GO:1903706,GO:1905114,GO:1905330,GO:1990386,GO:2000026,GO:2000027,GO:2000736
EggNOG free text desc.intracellular protein transport
EggNOG OGsCOG4354@1,KOG1077@2759
Ec32 ortholog descriptionCoatomer protein complex, alpha sub-unit
Ec32 orthologEc-05_005870.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147
Exons3
Model size396
Cds size396
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10450.448.1prot_L-elsbetiae_contig10450.448.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10450 5108..6820 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815269.6050494-CDS-L-elsbetiae_contig10450:5107..52011622815269.6050494-CDS-L-elsbetiae_contig10450:5107..5201Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10450 5108..5201 -
1691682807.6531916-CDS-L-elsbetiae_contig10450:5107..52011691682807.6531916-CDS-L-elsbetiae_contig10450:5107..5201Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10450 5108..5201 -
1622815269.614723-CDS-L-elsbetiae_contig10450:5962..61471622815269.614723-CDS-L-elsbetiae_contig10450:5962..6147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10450 5963..6147 -
1691682807.6687484-CDS-L-elsbetiae_contig10450:5962..61471691682807.6687484-CDS-L-elsbetiae_contig10450:5962..6147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10450 5963..6147 -
1622815269.624802-CDS-L-elsbetiae_contig10450:6703..68201622815269.624802-CDS-L-elsbetiae_contig10450:6703..6820Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10450 6704..6820 -
1691682807.6803875-CDS-L-elsbetiae_contig10450:6703..68201691682807.6803875-CDS-L-elsbetiae_contig10450:6703..6820Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10450 6704..6820 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10450.448.1

>prot_L-elsbetiae_contig10450.448.1 ID=prot_L-elsbetiae_contig10450.448.1|Name=mRNA_L-elsbetiae_contig10450.448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=132bp
SPQEPNIRYLGLEVMSRLARLEGNETAKKHQTTVLMSLKDADISIRRRAL
DLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLN
WYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH
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mRNA from alignment at L-elsbetiae_contig10450:5108..6820-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10450.448.1 ID=mRNA_L-elsbetiae_contig10450.448.1|Name=mRNA_L-elsbetiae_contig10450.448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1713bp|location=Sequence derived from alignment at L-elsbetiae_contig10450:5108..6820- (Laminarionema elsbetiae ELsaHSoW15)
TCTCCTCAGGAACCCAACATCCGATACCTCGGGCTGGAGGTGATGTCGCG
GCTGGCAAGACTGGAGGGGAACGAGACGGCCAAGAAGCACCAGACGACGG
TGCTTATGTCCCTCAAGGTAGGTATAGGTTTGTTTGCTTGTTTGTTCCTA
TCTTGTAAGTTTTTTTTGTTGCTATCTTGTACACACATACGTCCCTCAAG
ATAGGTTCGGTTCGCTTGTACCTATCTTGGCGCAGAGGGAGAGATAGAGA
GAGAGAGAGAGAAAGTTCCGCCTTCGCGCGAAGAAATTCAGTTTTATCTG
TCTATTTTTTTATTTTTTTATTTTTTTCACATTTATTTCCAGCGCTCGAT
GGGCTGCTTGCTCCCTGTCACGAGGACACCTGTCACGAGGACATCTTGCC
AGAGTACTGAACCGTGGTCACAAATAAGGCAGGGTTCCTTCCCCCAAGGC
CCCCACTCCCCCCCGTCTGCGGTGCTTGCCTACTATTTTTATCGCGAGAA
GGGTTCAGCCGTCCCTTTCCCTCGTCGACGGTGTGTGAGGTCGAAGTTGC
ATATGTAGGAAAATAAAAGAGACAGGGGCTCCGTGACCCTAACCCTAACC
CTAACACTGTGTAGCCCTAAACCGACCCCCACCCCCCGCGCCTCCATTTT
TTTTGTTCGCTGCTTCCGTCCAGGACGCGGACATCAGCATCCGGCGGAGG
GCCCTGGACCTGCTGTTCGTGATGGCGGACGAGACCAACGGCGCCGTGAT
CGTGGAGGAGCTGGTCACGTACCTCGGGTCCTCGGGGGCGGCCATCCGAG
AGGAGATGGTGCTCAAGATCGCCATCCTCGCGGAGAAGTTCACGGACGAT
CTCAACTGGTGGGTTGATGCGGGTTGATGCGGTGCGGTGTTGTGCGATGT
GAGTTGCGGTGCGGTTTGATGCGGTGCGATTCAGTGCGATTTGGTGCGGT
GTGATGCGGTGTGATGCGGTGCGGTGCGATTCAGCGCGATGCGGTGCGAT
ACGGGTTGCTGCGGTGGGTTGCGGTGCGATGCGGGTTGATGCGTTGGGTT
GCCGTGGGTTGCGGTGCGGTGGGTTGCGTTGCGGTGCGGTGCGGTGCGGC
GCGATGTGCTGAAGGTATCTAGTTCGGTTGGGGGCGTGCGCGCTCTGTTC
GTTGGCGCTGTGCTGTGTGTTATTGTTTTGGTGGTGGTGGTGTTAAATAG
ATGAGAGTGTTGGTCGCTGACTATTGGCATGTGCCAGTCAGCACAAAAGT
AGGCCCACTTAAGGCGGGGGCCCGGCAACCCTCCTAATTACGTGGGGGGG
GGTGATATTTATTCTATTTCCAGCGGTGCCCCGAATAAGCGAGGATCTGT
TGGGTTCTCGCCGTGATGACACCGCCCGTGCGCTTTGTAGCGGCAGCAAA
AGTAGCCGAGTGCAGTGCTTCGGATGGCGTTTTCTCGGTGTCGTGGTGAA
TGAACAAAGGCACGCGCCCTTCTTCCCAGCTTGGGAGATCGAGAGAGCAG
CGGTATTGCGGTATTATTGCATCACACAGACATGCGGCGGGATAAGGTTG
CTCCGCACCAGCCGCTCGTTCAGTTGCTATGCGCTGTGCGTGCGGATGTC
TGATGTTTGATGTTTGAAGGTACGTGGACAAGATGCTGGAGATGATCGCC
TTGGCCGGAGACTTTGTCGGCGAGGCCGTGTGGCACCGCATTATTCAGAT
CGTCACCAACCAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10450:5108..6820-

>mRNA_L-elsbetiae_contig10450.448.1 ID=mRNA_L-elsbetiae_contig10450.448.1|Name=mRNA_L-elsbetiae_contig10450.448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=792bp|location=Sequence derived from alignment at L-elsbetiae_contig10450:5108..6820- (Laminarionema elsbetiae ELsaHSoW15)
TCTCCTCAGGAACCCAACATCCGATACCTCGGGCTGGAGGTGATGTCGCG
GCTGGCAAGACTGGAGGGGAACGAGACGGCCAAGAAGCACCAGACGACGG
TGCTTATGTCCCTCAAGTCTCCTCAGGAACCCAACATCCGATACCTCGGG
CTGGAGGTGATGTCGCGGCTGGCAAGACTGGAGGGGAACGAGACGGCCAA
GAAGCACCAGACGACGGTGCTTATGTCCCTCAAGGACGCGGACATCAGCA
TCCGGCGGAGGGCCCTGGACCTGCTGTTCGTGATGGCGGACGAGACCAAC
GGCGCCGTGATCGTGGAGGAGCTGGTCACGTACCTCGGGTCCTCGGGGGC
GGCCATCCGAGAGGAGATGGTGCTCAAGATCGCCATCCTCGCGGAGAAGT
TCACGGACGATCTCAACTGGACGCGGACATCAGCATCCGGCGGAGGGCCC
TGGACCTGCTGTTCGTGATGGCGGACGAGACCAACGGCGCCGTGATCGTG
GAGGAGCTGGTCACGTACCTCGGGTCCTCGGGGGCGGCCATCCGAGAGGA
GATGGTGCTCAAGATCGCCATCCTCGCGGAGAAGTTCACGGACGATCTCA
ACTGGTACGTGGACAAGATGCTGGAGATGATCGCCTTGGCCGGAGACTTT
GTCGGCGAGGCCGTGTGGCACCGCATTATTCAGATCGTCACCAACCACGT
ACGTGGACAAGATGCTGGAGATGATCGCCTTGGCCGGAGACTTTGTCGGC
GAGGCCGTGTGGCACCGCATTATTCAGATCGTCACCAACCAC
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