prot_L-elsbetiae_contig10450.448.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10450.448.1
Unique Name	prot_L-elsbetiae_contig10450.448.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	132

Homology

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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: D7FKE1_ECTSI (AP-1 complex subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE1_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 3.260e-71
Identity = 121/130 (93.08%), Postives = 124/130 (95.38%), Query Frame = 0

Query:    3 QEPNIRYLGLEVMSRLARLEGNETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 132
            +EPNIRYLGLEVMSRLARLEGNETAKKHQ TVLMSLKDADISIRRRALDLLFVMADETNGA IVEELVTYL +SGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIA+AGD V  AVWHRIIQIVTNH
Sbjct:  349 KEPNIRYLGLEVMSRLARLEGNETAKKHQATVLMSLKDADISIRRRALDLLFVMADETNGAEIVEELVTYLAASGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIAVAGDSVAGAVWHRIIQIVTNH 478

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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A6H5L7E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E0_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 5.650e-69
Identity = 121/130 (93.08%), Postives = 124/130 (95.38%), Query Frame = 0

Query:    3 QEPNIRYLGLEVMSRLARLEGNETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 132
            +EPNIRYLGLEVMSRLARLEGNETAKKHQ TVLMSLKDADISIRRRALDLLFVMADETNGA IVEELVTYL +SGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIA+AGD V  AVWHRIIQIVTNH
Sbjct:  353 KEPNIRYLGLEVMSRLARLEGNETAKKHQATVLMSLKDADISIRRRALDLLFVMADETNGAEIVEELVTYLAASGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIAVAGDSVAGAVWHRIIQIVTNH 482

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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A836C8G3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.250e-55
Identity = 96/130 (73.85%), Postives = 113/130 (86.92%), Query Frame = 0

Query:    3 QEPNIRYLGLEVMSRLARLEGNETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 132
            +EPNIRYLGLE MSRLARLEGNE+ K+H+ TV++SLKDADIS+RRRALDLLFV++D  N   IVEEL+ YL  S AAIREEMVLKIAILAEKFT+DL WYVD +L+MI++AGD VG  VWHRI+QIVTN+
Sbjct:  375 KEPNIRYLGLETMSRLARLEGNESIKRHKATVMVSLKDADISMRRRALDLLFVISDRDNAVEIVEELMAYLALSDAAIREEMVLKIAILAEKFTNDLRWYVDTVLQMISIAGDHVGAEVWHRIVQIVTNN 504

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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A7S2PNC4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PNC4_9STRA)

HSP 1 Score: 178 bits (451), Expect = 6.000e-50
Identity = 88/133 (66.17%), Postives = 112/133 (84.21%), Query Frame = 0

Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 132
            S +EPNIRYLGL  M+RLA+LEG+ ++ KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N   IV+ELV +L ++ AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V +++WHR++QIVTNH
Sbjct:   69 SVREPNIRYLGLMTMARLAQLEGSGQSVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAEQIVDELVAHLVNADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDSIWHRVVQIVTNH 201

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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: B7FY75_PHATC (AP-2 complex subunit alpha n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY75_PHATC)

HSP 1 Score: 178 bits (452), Expect = 2.070e-49
Identity = 88/133 (66.17%), Postives = 112/133 (84.21%), Query Frame = 0

Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 132
            S +EPNIRYLGL  M++LA+LEG+ E+ KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N  +IV+EL+ +L  + AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V +A+WHR++QIVTNH
Sbjct:  396 SVREPNIRYLGLMTMAKLAQLEGSAESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAELIVDELIGHLALADAAIREEMVLKIAILAEKYATDLRWYVDSILKLISISGDNVSDAIWHRVVQIVTNH 528

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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A7S2ULM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULM5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.360e-49
Identity = 88/133 (66.17%), Postives = 108/133 (81.20%), Query Frame = 0

Query:    1 SPQEPNIRYLGLEVMSRLARLE-GNETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 132
            S +EPNIRYLGL  M+RLA++E   E  KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N   IV+ELV +L  + AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V +A+WHR++QIVTNH
Sbjct:  366 SVREPNIRYLGLMTMARLAQIETSGEGIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVVADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVNDAIWHRVVQIVTNH 498

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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A1Z5K119_FISSO (AP-2 complex subunit alpha n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K119_FISSO)

HSP 1 Score: 177 bits (449), Expect = 5.350e-49
Identity = 89/133 (66.92%), Postives = 111/133 (83.46%), Query Frame = 0

Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 132
            S +EPNIRYLGL  M++LA+LEG+ E+ KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N   IV+ELV +L  + AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V +A+WHR++QIVTNH
Sbjct:  418 SVREPNIRYLGLMTMAKLAQLEGSGESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVIADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDAIWHRVVQIVTNH 550

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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A7S1BCA8_9STRA (AP-2 complex subunit alpha n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCA8_9STRA)

HSP 1 Score: 177 bits (448), Expect = 6.970e-49
Identity = 89/133 (66.92%), Postives = 110/133 (82.71%), Query Frame = 0

Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 132
            S +EPNIRYLGL  M+RLA+LEG+ E+ KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N   IV ELV YL  + AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V +++WHR++QIVTN+
Sbjct:  340 SVREPNIRYLGLMTMARLAQLEGSAESVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAEKIVNELVVYLTVADAAIREEMVLKIAILAEKYATDLKWYVDTILKLISISGDHVSDSIWHRVVQIVTNN 472

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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: K0R582_THAOC (AP-2 complex subunit alpha n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R582_THAOC)

HSP 1 Score: 176 bits (445), Expect = 1.860e-48
Identity = 86/133 (64.66%), Postives = 112/133 (84.21%), Query Frame = 0

Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 132
            S +EPNIRYLGL  M++LA++EG+ E AKKHQ TVL+SLKDADIS+RRRALDLLFV+ D  N   +V+ELV +L  + A+IREEMVLKIAILAEK+  DL WYVD +L++I++AGD+V +++WHR++QIVTNH
Sbjct:  363 SVREPNIRYLGLMTMAKLAQIEGSVEGAKKHQATVLVSLKDADISVRRRALDLLFVICDTDNAERVVDELVAHLVVADASIREEMVLKIAILAEKYATDLRWYVDTILKLISIAGDYVSDSIWHRVVQIVTNH 495

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BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Match: A0A7S2WLX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLX7_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.050e-48
Identity = 88/133 (66.17%), Postives = 109/133 (81.95%), Query Frame = 0

Query:    1 SPQEPNIRYLGLEVMSRLARLEGN-ETAKKHQTTVLMSLKDADISIRRRALDLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLNWYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH 132
            S +EPNIRYLGL  M++LA+LEG+ E  KKHQ TVL+SLKDADIS+RRRALDLLFVM D  N   IV+ELV +L  + AAIREEMVLKIAILAEK+  DL WYVD +L++I+++GD V + +WHR++QIVTNH
Sbjct:  389 SVREPNIRYLGLMTMAKLAQLEGSAEGVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNSERIVDELVAHLVLADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDPIWHRVVQIVTNH 521

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10450.448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKE1_ECTSI	3.260e-71	93.08	AP-1 complex subunit gamma n=1 Tax=Ectocarpus sili...	[more]
A0A6H5L7E0_9PHAE	5.650e-69	93.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836C8G3_9STRA	1.250e-55	73.85	AP-1 complex subunit gamma n=1 Tax=Tribonema minus...	[more]
A0A7S2PNC4_9STRA	6.000e-50	66.17	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
B7FY75_PHATC	2.070e-49	66.17	AP-2 complex subunit alpha n=3 Tax=Phaeodactylum t...	[more]
A0A7S2ULM5_9STRA	2.360e-49	66.17	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]
A0A1Z5K119_FISSO	5.350e-49	66.92	AP-2 complex subunit alpha n=2 Tax=Fistulifera sol...	[more]
A0A7S1BCA8_9STRA	6.970e-49	66.92	AP-2 complex subunit alpha n=1 Tax=Corethron hystr...	[more]
K0R582_THAOC	1.860e-48	64.66	AP-2 complex subunit alpha n=1 Tax=Thalassiosira o...	[more]
A0A7S2WLX7_9STRA	2.050e-48	66.17	Hypothetical protein (Fragment) n=1 Tax=Eucampia a...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 3..131 e-value: 8.3E-29 score: 100.5
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..132 e-value: 9.5E-48 score: 164.9
None	No IPR available	PANTHER	PTHR22780	ADAPTIN, ALPHA/GAMMA/EPSILON	coord: 3..132
None	No IPR available	PANTHER	PTHR22780:SF4	AP-2 COMPLEX SUBUNIT ALPHA	coord: 3..132
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 4..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10450	contig	L-elsbetiae_contig10450:5108..6820 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10450.448.1	mRNA_L-elsbetiae_contig10450.448.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10450 5108..6820 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10450.448.1 ID=prot_L-elsbetiae_contig10450.448.1|Name=mRNA_L-elsbetiae_contig10450.448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=132bp
SPQEPNIRYLGLEVMSRLARLEGNETAKKHQTTVLMSLKDADISIRRRAL
DLLFVMADETNGAVIVEELVTYLGSSGAAIREEMVLKIAILAEKFTDDLN
WYVDKMLEMIALAGDFVGEAVWHRIIQIVTNH

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002553	Clathrin/coatomer_adapt-like_N
IPR011989	ARM-like
IPR016024	ARM-type_fold