mRNA_L-elsbetiae_contig10247.291.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A6H5JUF6_9PHAE (RelA_SpoT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF6_9PHAE) HSP 1 Score: 445 bits (1144), Expect = 1.230e-150 Identity = 232/297 (78.11%), Postives = 250/297 (84.18%), Query Frame = 1 Query: 1 FLLQLAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYKSD--GSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGIRLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVLDLDLAMA 885 F+ +LA EVVLQHRIKEPYSMWKKM RQGGGVD VYDAVALRAV+KAKR+PGE++ EERSKQLCYHAM+VAKKMYP+VEGRCKDYVM PKPNGYQSLHSTHE SVSP AAASA GER THFELQVRSA MHHKAEYGHAAHWSYKSD G+K G RR+W+SY+R A+GARR S + AVP+SVSSG+EL+TWLHLELRQRKVFVFGPDNLIWELDKASATA NVLGR+HAAGIRLIDGGAA GK GITLVNGKAVP HYAFKNGDVLDLDLAMA Sbjct: 357 FMSELAGEVVLQHRIKEPYSMWKKMTRQGGGVDGVYDAVALRAVLKAKRLPGETEEDHEERSKQLCYHAMSVAKKMYPSVEGRCKDYVMRPKPNGYQSLHSTHEVSVSPAAAASAGGERRTHFELQVRSASMHHKAEYGHAAHWSYKSDDGGAK------------AGGVGERRSWRSYDRLKAAGARRTG---IDSPATAVPDSVSSGKELVTWLHLELRQRKVFVFGPDNLIWELDKASATAENVLGRSHAAGIRLIDGGAAGGKKGITLVNGKAVPRHYAFKNGDVLDLDLAMA 638
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: D7G5R6_ECTSI (GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R6_ECTSI) HSP 1 Score: 224 bits (572), Expect = 7.230e-71 Identity = 122/166 (73.49%), Postives = 133/166 (80.12%), Query Frame = 1 Query: 394 MHHKAEYGHAAHWSYKSD--GSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGIRLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVLDLDLAMA 885 MHHKAEYGHAAHWSYKSD G+K G RR+W+SY+R A+GARR S + AVP+SVSSG+EL+TWLHLEL+QRKVFVFGPDNLIWELDKASATA NVLGR+HAAGIRLIDGGAA GKTGITLVNGKAVP HYAFKNGDVLDLDLAMA Sbjct: 1 MHHKAEYGHAAHWSYKSDDGGAK------------AGGVGERRSWRSYDRLKAAGARRTG---MDSPATAVPDSVSSGKELVTWLHLELQQRKVFVFGPDNLIWELDKASATAENVLGRSHAAGIRLIDGGAAGGKTGITLVNGKAVPRHYAFKNGDVLDLDLAMA 151
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: D7FVR6_ECTSI (Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR6_ECTSI) HSP 1 Score: 219 bits (558), Expect = 4.490e-62 Identity = 143/308 (46.43%), Postives = 172/308 (55.84%), Query Frame = 1 Query: 1 FLLQLAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEG--RCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERH---THFELQVRSACMHHKAEYGHAAHWSYKSDGSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAA----GIRLID---------GGAAAGKTGITLVNGKAVPLHYAFKNGDVLDL 870 F QL E LQHRIK PYSMWKKM++ GV+ V+DAVA+R V++A++ GES + +RS+ LCY AM+V KK+YP + R KDYV+ PKPNGYQSLH+T + P D RH E QVRS MH KAE+G AAHWSYK S G T + P A K A VP+SV+SG EL+ WLH ELR+RKVFVFGPD IWELDK SATAG+ LGR++ G L D G A KT VNG+ V Y KNGDV D+ Sbjct: 469 FTNQLTGEATLQHRIKSPYSMWKKMEKNQVGVEGVFDAVAVRVVLEARKWQGESLESYTQRSEDLCYQAMSVIKKLYPWSQSPQRVKDYVVKPKPNGYQSLHATQ---LVPDVT---DMTRHGPSVAIEFQVRSKEMHQKAEFGLAAHWSYKESSSS----------MPSGLGWEEDTNTTITPPHNHKAPGK---------ARVPDSVTSGPELVDWLHRELRERKVFVFGPDRKIWELDKGSATAGDALGRSYMQKFYEGALLHDRRKIKSDAKGQGAKRKTRTAWVNGREVDASYLLKNGDVFDV 751
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A836CJV0_9STRA (RelA_SpoT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV0_9STRA) HSP 1 Score: 192 bits (487), Expect = 8.190e-53 Identity = 121/292 (41.44%), Postives = 159/292 (54.45%), Query Frame = 1 Query: 1 FLLQLAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYKSDGSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGI--RLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVLDL 870 F+ Q+ E V L R KEPYSMW+KM R + V+DAVALR V KA+R G+ D RS LC+ AM + +++YPT+EGR KDYV +PK NGY+SLH+T S + AD FE+Q+RS MH +A +G A+H+SYK +GS D AA ASG VP ++ GR + WLH EL+ RKVFVFGPD LIW+LDK SATA +V R + R GG + + +V+G VP YA +NGD + + Sbjct: 372 FMAQV-ESVSLAGRAKEPYSMWRKMLRTRCALADVHDAVALRVVFKARRRAGDGDAEYAARSTALCHDAMRIVRRLYPTLEGRFKDYVAAPKANGYRSLHATALMPRSDCSGGGADLAGAHPFEVQIRSFEMHQQASFGVASHFSYKGEGSMD-------WLAKAAPAAXXXXXXXXXXXXASG-----------WGFVVPAEIADGRAFVNWLHNELQSRKVFVFGPDGLIWDLDK-SATAADVARRVNIQRFYARAPRGGGGSASSVEIMVHGHQVPRDYALRNGDAISV 643
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A836CGU9_9STRA (RelA_SpoT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGU9_9STRA) HSP 1 Score: 189 bits (479), Expect = 9.050e-52 Identity = 120/285 (42.11%), Postives = 153/285 (53.68%), Query Frame = 1 Query: 16 AEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYKSDGSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGI--RLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVL 864 E V L R K+PYSMW+K RQG V + DAVALR V KA+R+P E+D E RS+ LCY AM + + +YPTV R KDY+ +PK NGY+SLH+T D + FE+QVR+ MH +AEYG AAHW YK +GS + W +AS A R R + AVP GR + WLH EL+ RKV+VFGPD LIW+LDK SATA +V R A R + G ++ +V G VP Y +NGD + Sbjct: 378 VESVSLAGRTKDPYSMWRKTIRQGVAVADIADAVALRVVFKARRLPAETDAQYESRSEALCYEAMRIVEGLYPTVTTRFKDYICAPKANGYRSLHTT------ALMQCDRDPDNVHPFEVQVRTFEMHQQAEYGAAAHWGYKGEGSTE--------------------W------LASHADSPRARTI-GGAPAVPADFVDGRAFVNWLHSELQSRKVYVFGPDGLIWDLDK-SATAADVARRVSIANFYSRRMRGRSSVD----IMVEGNQVPCDYLLRNGDAI 624
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A6H5KUK5_9PHAE (RelA_SpoT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK5_9PHAE) HSP 1 Score: 129 bits (325), Expect = 5.190e-30 Identity = 93/229 (40.61%), Postives = 114/229 (49.78%), Query Frame = 1 Query: 91 GVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHA----MAVAKKMYPTVEG--RCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERH---THFELQVRSACMHHKAEYGHAAHWSYKSDGSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTH 750 GV+ V+DAVA+R V++A++ GES + +RS+ LCY A M+V KK+YP + R KDYV+ PKPNGYQSLH+T + P D RH E QVRS MH KAE+G AAHWSYK S + G W V IT H RKVFVFGPD IWELDK SATAG+ LGR++ Sbjct: 441 GVEGVFDAVAVRVVLEARKWQGESLESYTQRSEDLCYQASPCAMSVIKKLYPWSQSQQRVKDYVVKPKPNGYQSLHATQ---LVPDVT---DMTRHGPSVAIEFQVRSKEMHQKAEFGLAAHWSYKESSS---------------SMPGGLGW-----------------------------VEDTNTTITRPHT----RKVFVFGPDRKIWELDKGSATAGDALGRSY 615
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A6V1NSY6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NSY6_HETAK) HSP 1 Score: 121 bits (304), Expect = 1.450e-27 Identity = 92/285 (32.28%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 13 LAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIK-AKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYKSDGSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGIRLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVL 864 LA+EV + R+KEP SMWKKM ++ +D + DAVA+R ++K A P D A CY + ++ + RCKDY+ SPK NGYQSLH+T P T E+Q+R++ MH AEYG AAH++YKS+GS A A R + S++SGR+LI LH +LR+++VFVFGP I + + + TH T T +NG +Y +GDV+ Sbjct: 315 LADEVTISGRVKEPLSMWKKMVQKKSSLDLIQDAVAVRIIVKPAAASPLNDDQA--------CYLMNDIVHSIWESDSSRCKDYIRSPKKNGYQSLHATMNV---PHFGLK------TPVEVQIRTSEMHQTAEYGKAAHFTYKSEGS---------------AVAKHR---------------------------LQSSIASGRQLIEVLHNDLREKQVFVFGPQGNILAFQRGATISDLSRLLTHT--------------TFSTRINGHVRTGNYQLGDGDVV 526
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A7S1TUU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUU9_9STRA) HSP 1 Score: 119 bits (299), Expect = 4.670e-27 Identity = 93/317 (29.34%), Postives = 141/317 (44.48%), Query Frame = 1 Query: 16 AEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKM--YPTVEGRCKDYVMSPKPNGYQSLHST--HEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSY---KSDGSK---DEXXXXXXXXXVEGAAAGR---RTWKSYERPVASGARRKRKRRA--------KSHSAAVP---------ESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGIRLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVLDLDL 876 A V + R+KE YS+W KM+ + +D + D VALR V+ R GE++ A + R LCYH + + + + + + + KDY+ PKPNGYQSLH++ H V E+Q+R+ MH AE+G AAHW Y K GS+ D V GA +G R + YER SG R + K +P + V++ RE + + E+ ++VFVF D I L + + G+ ++ +NGKA Y KNGDV+ +++ Sbjct: 149 AVGVAVTGRMKEMYSLWMKMEHKERNLDRIQDTVALRVVLDLARQEGEAEEAYKMRGVWLCYHVLGLVQHLPGFRPIPAQVKDYISFPKPNGYQSLHTSIMHSGQV---------------VEVQIRTGWMHRVAEFGMAAHWQYAKVKYAGSRADMDADDVAESGGAVAGAGSGEGGERPSEGYERSAGSGGRAVINEESPPELPPSGKKVPLPIPWLTTIKEWQDEVATSREFVDSVRSEVLGKRVFVFLRDGKILNLSRGATVVDAAFQIHTEVGLNMVG----------AKINGKAEEPSYLLKNGDVVSVEV 440
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A7S2NXX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NXX3_9STRA) HSP 1 Score: 118 bits (295), Expect = 3.930e-26 Identity = 64/134 (47.76%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 40 RIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYK 441 RIKEPYSMW+K+ + D+ DAVA+R V+ K+ GE + R + LCY+A + + Y V GR KDY+ SPK NGYQSLH T A GE FE+QVRS MH AEYG AAHW YK Sbjct: 379 RIKEPYSMWRKILKNKCSHDATQDAVAMRVVLSGKKQEGEDEEVTRARERALCYYAQELCMQNYAAVTGRVKDYISSPKKNGYQSLHYT--------ANMRWHGEEWP-FEIQVRSHEMHRVAEYGVAAHWDYK 503
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A370JXC2_9DEIN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=3 Tax=Deinococcus-Thermus TaxID=1297 RepID=A0A370JXC2_9DEIN) HSP 1 Score: 115 bits (289), Expect = 2.960e-25 Identity = 60/146 (41.10%), Postives = 88/146 (60.27%), Query Frame = 1 Query: 4 LLQLAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYK 441 L Q E + + R K YS+WKKM+R+G ++ +YD +ALR V++ K+ P ++AL E KQ+CYH + + ++ + GR KDY+ PKPNGYQSLH+T + +G E+Q+R+ MH AE+G AAHW YK Sbjct: 252 LRQSVERLEVTGRTKHLYSIWKKMQREGKALEQIYDLLALRVVLEPKKGPDAEENALRE--KQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTT---------VIAVNG---LPLEVQIRTKEMHQVAEFGIAAHWLYK 383 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10247.291.1 >prot_L-elsbetiae_contig10247.291.1 ID=prot_L-elsbetiae_contig10247.291.1|Name=mRNA_L-elsbetiae_contig10247.291.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=296bp FLLQLAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMback to top mRNA from alignment at L-elsbetiae_contig10247:4905..6683- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10247.291.1 ID=mRNA_L-elsbetiae_contig10247.291.1|Name=mRNA_L-elsbetiae_contig10247.291.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1779bp|location=Sequence derived from alignment at L-elsbetiae_contig10247:4905..6683- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10247:4905..6683- >mRNA_L-elsbetiae_contig10247.291.1 ID=mRNA_L-elsbetiae_contig10247.291.1|Name=mRNA_L-elsbetiae_contig10247.291.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1776bp|location=Sequence derived from alignment at L-elsbetiae_contig10247:4905..6683- (Laminarionema elsbetiae ELsaHSoW15)back to top |