mRNA_L-elsbetiae_contig10247.291.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10247.291.1
Unique NamemRNA_L-elsbetiae_contig10247.291.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A6H5JUF6_9PHAE (RelA_SpoT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF6_9PHAE)

HSP 1 Score: 445 bits (1144), Expect = 1.230e-150
Identity = 232/297 (78.11%), Postives = 250/297 (84.18%), Query Frame = 1
Query:    1 FLLQLAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYKSD--GSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGIRLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVLDLDLAMA 885
            F+ +LA EVVLQHRIKEPYSMWKKM RQGGGVD VYDAVALRAV+KAKR+PGE++   EERSKQLCYHAM+VAKKMYP+VEGRCKDYVM PKPNGYQSLHSTHE SVSP AAASA GER THFELQVRSA MHHKAEYGHAAHWSYKSD  G+K             G    RR+W+SY+R  A+GARR       S + AVP+SVSSG+EL+TWLHLELRQRKVFVFGPDNLIWELDKASATA NVLGR+HAAGIRLIDGGAA GK GITLVNGKAVP HYAFKNGDVLDLDLAMA
Sbjct:  357 FMSELAGEVVLQHRIKEPYSMWKKMTRQGGGVDGVYDAVALRAVLKAKRLPGETEEDHEERSKQLCYHAMSVAKKMYPSVEGRCKDYVMRPKPNGYQSLHSTHEVSVSPAAAASAGGERRTHFELQVRSASMHHKAEYGHAAHWSYKSDDGGAK------------AGGVGERRSWRSYDRLKAAGARRTG---IDSPATAVPDSVSSGKELVTWLHLELRQRKVFVFGPDNLIWELDKASATAENVLGRSHAAGIRLIDGGAAGGKKGITLVNGKAVPRHYAFKNGDVLDLDLAMA 638          
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: D7G5R6_ECTSI (GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R6_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 7.230e-71
Identity = 122/166 (73.49%), Postives = 133/166 (80.12%), Query Frame = 1
Query:  394 MHHKAEYGHAAHWSYKSD--GSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGIRLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVLDLDLAMA 885
            MHHKAEYGHAAHWSYKSD  G+K             G    RR+W+SY+R  A+GARR       S + AVP+SVSSG+EL+TWLHLEL+QRKVFVFGPDNLIWELDKASATA NVLGR+HAAGIRLIDGGAA GKTGITLVNGKAVP HYAFKNGDVLDLDLAMA
Sbjct:    1 MHHKAEYGHAAHWSYKSDDGGAK------------AGGVGERRSWRSYDRLKAAGARRTG---MDSPATAVPDSVSSGKELVTWLHLELQQRKVFVFGPDNLIWELDKASATAENVLGRSHAAGIRLIDGGAAGGKTGITLVNGKAVPRHYAFKNGDVLDLDLAMA 151          
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: D7FVR6_ECTSI (Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR6_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 4.490e-62
Identity = 143/308 (46.43%), Postives = 172/308 (55.84%), Query Frame = 1
Query:    1 FLLQLAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEG--RCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERH---THFELQVRSACMHHKAEYGHAAHWSYKSDGSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAA----GIRLID---------GGAAAGKTGITLVNGKAVPLHYAFKNGDVLDL 870
            F  QL  E  LQHRIK PYSMWKKM++   GV+ V+DAVA+R V++A++  GES  +  +RS+ LCY AM+V KK+YP  +   R KDYV+ PKPNGYQSLH+T    + P      D  RH      E QVRS  MH KAE+G AAHWSYK   S              G      T  +   P    A  K         A VP+SV+SG EL+ WLH ELR+RKVFVFGPD  IWELDK SATAG+ LGR++      G  L D         G  A  KT    VNG+ V   Y  KNGDV D+
Sbjct:  469 FTNQLTGEATLQHRIKSPYSMWKKMEKNQVGVEGVFDAVAVRVVLEARKWQGESLESYTQRSEDLCYQAMSVIKKLYPWSQSPQRVKDYVVKPKPNGYQSLHATQ---LVPDVT---DMTRHGPSVAIEFQVRSKEMHQKAEFGLAAHWSYKESSSS----------MPSGLGWEEDTNTTITPPHNHKAPGK---------ARVPDSVTSGPELVDWLHRELRERKVFVFGPDRKIWELDKGSATAGDALGRSYMQKFYEGALLHDRRKIKSDAKGQGAKRKTRTAWVNGREVDASYLLKNGDVFDV 751          
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A836CJV0_9STRA (RelA_SpoT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV0_9STRA)

HSP 1 Score: 192 bits (487), Expect = 8.190e-53
Identity = 121/292 (41.44%), Postives = 159/292 (54.45%), Query Frame = 1
Query:    1 FLLQLAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYKSDGSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGI--RLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVLDL 870
            F+ Q+ E V L  R KEPYSMW+KM R    +  V+DAVALR V KA+R  G+ D     RS  LC+ AM + +++YPT+EGR KDYV +PK NGY+SLH+T     S  +   AD      FE+Q+RS  MH +A +G A+H+SYK +GS D              AA            ASG               VP  ++ GR  + WLH EL+ RKVFVFGPD LIW+LDK SATA +V  R +      R   GG  +  +   +V+G  VP  YA +NGD + +
Sbjct:  372 FMAQV-ESVSLAGRAKEPYSMWRKMLRTRCALADVHDAVALRVVFKARRRAGDGDAEYAARSTALCHDAMRIVRRLYPTLEGRFKDYVAAPKANGYRSLHATALMPRSDCSGGGADLAGAHPFEVQIRSFEMHQQASFGVASHFSYKGEGSMD-------WLAKAAPAAXXXXXXXXXXXXASG-----------WGFVVPAEIADGRAFVNWLHNELQSRKVFVFGPDGLIWDLDK-SATAADVARRVNIQRFYARAPRGGGGSASSVEIMVHGHQVPRDYALRNGDAISV 643          
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A836CGU9_9STRA (RelA_SpoT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGU9_9STRA)

HSP 1 Score: 189 bits (479), Expect = 9.050e-52
Identity = 120/285 (42.11%), Postives = 153/285 (53.68%), Query Frame = 1
Query:   16 AEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYKSDGSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGI--RLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVL 864
             E V L  R K+PYSMW+K  RQG  V  + DAVALR V KA+R+P E+D   E RS+ LCY AM + + +YPTV  R KDY+ +PK NGY+SLH+T             D +    FE+QVR+  MH +AEYG AAHW YK +GS +                    W      +AS A   R R     + AVP     GR  + WLH EL+ RKV+VFGPD LIW+LDK SATA +V  R   A    R + G ++       +V G  VP  Y  +NGD +
Sbjct:  378 VESVSLAGRTKDPYSMWRKTIRQGVAVADIADAVALRVVFKARRLPAETDAQYESRSEALCYEAMRIVEGLYPTVTTRFKDYICAPKANGYRSLHTT------ALMQCDRDPDNVHPFEVQVRTFEMHQQAEYGAAAHWGYKGEGSTE--------------------W------LASHADSPRARTI-GGAPAVPADFVDGRAFVNWLHSELQSRKVYVFGPDGLIWDLDK-SATAADVARRVSIANFYSRRMRGRSSVD----IMVEGNQVPCDYLLRNGDAI 624          
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A6H5KUK5_9PHAE (RelA_SpoT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK5_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 5.190e-30
Identity = 93/229 (40.61%), Postives = 114/229 (49.78%), Query Frame = 1
Query:   91 GVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHA----MAVAKKMYPTVEG--RCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERH---THFELQVRSACMHHKAEYGHAAHWSYKSDGSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTH 750
            GV+ V+DAVA+R V++A++  GES  +  +RS+ LCY A    M+V KK+YP  +   R KDYV+ PKPNGYQSLH+T    + P      D  RH      E QVRS  MH KAE+G AAHWSYK   S               +  G   W                             V      IT  H     RKVFVFGPD  IWELDK SATAG+ LGR++
Sbjct:  441 GVEGVFDAVAVRVVLEARKWQGESLESYTQRSEDLCYQASPCAMSVIKKLYPWSQSQQRVKDYVVKPKPNGYQSLHATQ---LVPDVT---DMTRHGPSVAIEFQVRSKEMHQKAEFGLAAHWSYKESSS---------------SMPGGLGW-----------------------------VEDTNTTITRPHT----RKVFVFGPDRKIWELDKGSATAGDALGRSY 615          
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A6V1NSY6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NSY6_HETAK)

HSP 1 Score: 121 bits (304), Expect = 1.450e-27
Identity = 92/285 (32.28%), Postives = 130/285 (45.61%), Query Frame = 1
Query:   13 LAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIK-AKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYKSDGSKDEXXXXXXXXXVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAVPESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGIRLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVL 864
            LA+EV +  R+KEP SMWKKM ++   +D + DAVA+R ++K A   P   D A        CY    +   ++ +   RCKDY+ SPK NGYQSLH+T      P           T  E+Q+R++ MH  AEYG AAH++YKS+GS               A A  R                           +  S++SGR+LI  LH +LR+++VFVFGP   I    + +  +      TH               T  T +NG     +Y   +GDV+
Sbjct:  315 LADEVTISGRVKEPLSMWKKMVQKKSSLDLIQDAVAVRIIVKPAAASPLNDDQA--------CYLMNDIVHSIWESDSSRCKDYIRSPKKNGYQSLHATMNV---PHFGLK------TPVEVQIRTSEMHQTAEYGKAAHFTYKSEGS---------------AVAKHR---------------------------LQSSIASGRQLIEVLHNDLREKQVFVFGPQGNILAFQRGATISDLSRLLTHT--------------TFSTRINGHVRTGNYQLGDGDVV 526          
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A7S1TUU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUU9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.670e-27
Identity = 93/317 (29.34%), Postives = 141/317 (44.48%), Query Frame = 1
Query:   16 AEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKM--YPTVEGRCKDYVMSPKPNGYQSLHST--HEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSY---KSDGSK---DEXXXXXXXXXVEGAAAGR---RTWKSYERPVASGARRKRKRRA--------KSHSAAVP---------ESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTHAAGIRLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVLDLDL 876
            A  V +  R+KE YS+W KM+ +   +D + D VALR V+   R  GE++ A + R   LCYH + + + +  +  +  + KDY+  PKPNGYQSLH++  H   V                E+Q+R+  MH  AE+G AAHW Y   K  GS+   D          V GA +G    R  + YER   SG R      +        K     +P         + V++ RE +  +  E+  ++VFVF  D  I  L + +             G+ ++             +NGKA    Y  KNGDV+ +++
Sbjct:  149 AVGVAVTGRMKEMYSLWMKMEHKERNLDRIQDTVALRVVLDLARQEGEAEEAYKMRGVWLCYHVLGLVQHLPGFRPIPAQVKDYISFPKPNGYQSLHTSIMHSGQV---------------VEVQIRTGWMHRVAEFGMAAHWQYAKVKYAGSRADMDADDVAESGGAVAGAGSGEGGERPSEGYERSAGSGGRAVINEESPPELPPSGKKVPLPIPWLTTIKEWQDEVATSREFVDSVRSEVLGKRVFVFLRDGKILNLSRGATVVDAAFQIHTEVGLNMVG----------AKINGKAEEPSYLLKNGDVVSVEV 440          
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A7S2NXX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NXX3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.930e-26
Identity = 64/134 (47.76%), Postives = 78/134 (58.21%), Query Frame = 1
Query:   40 RIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYK 441
            RIKEPYSMW+K+ +     D+  DAVA+R V+  K+  GE +     R + LCY+A  +  + Y  V GR KDY+ SPK NGYQSLH T        A     GE    FE+QVRS  MH  AEYG AAHW YK
Sbjct:  379 RIKEPYSMWRKILKNKCSHDATQDAVAMRVVLSGKKQEGEDEEVTRARERALCYYAQELCMQNYAAVTGRVKDYISSPKKNGYQSLHYT--------ANMRWHGEEWP-FEIQVRSHEMHRVAEYGVAAHWDYK 503          
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Match: A0A370JXC2_9DEIN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=3 Tax=Deinococcus-Thermus TaxID=1297 RepID=A0A370JXC2_9DEIN)

HSP 1 Score: 115 bits (289), Expect = 2.960e-25
Identity = 60/146 (41.10%), Postives = 88/146 (60.27%), Query Frame = 1
Query:    4 LLQLAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRMPGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLHSTHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYK 441
            L Q  E + +  R K  YS+WKKM+R+G  ++ +YD +ALR V++ K+ P   ++AL E  KQ+CYH + +   ++  + GR KDY+  PKPNGYQSLH+T           + +G      E+Q+R+  MH  AE+G AAHW YK
Sbjct:  252 LRQSVERLEVTGRTKHLYSIWKKMQREGKALEQIYDLLALRVVLEPKKGPDAEENALRE--KQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTT---------VIAVNG---LPLEVQIRTKEMHQVAEFGIAAHWLYK 383          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10247.291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUF6_9PHAE1.230e-15078.11RelA_SpoT domain-containing protein n=1 Tax=Ectoca... [more]
D7G5R6_ECTSI7.230e-7173.49GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus... [more]
D7FVR6_ECTSI4.490e-6246.43Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohyd... [more]
A0A836CJV0_9STRA8.190e-5341.44RelA_SpoT domain-containing protein (Fragment) n=1... [more]
A0A836CGU9_9STRA9.050e-5242.11RelA_SpoT domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KUK5_9PHAE5.190e-3040.61RelA_SpoT domain-containing protein n=1 Tax=Ectoca... [more]
A0A6V1NSY6_HETAK1.450e-2732.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1TUU9_9STRA4.670e-2729.34Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2NXX3_9STRA3.930e-2647.76Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A370JXC2_9DEIN2.960e-2541.10Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10247contigL-elsbetiae_contig10247:4905..6683 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score220.7
Seed ortholog evalue9.1e-55
Seed eggNOG ortholog2880.D7FVR6
KEGG rclassRC00002,RC00078
KEGG koko:K00951
KEGG ReactionR00429
KEGG Pathwayko00230,map00230
Hectar predicted targeting categoryother localisation
EggNOG free text desc.HD domain containing 3
EggNOG OGsCOG0317@1,KOG1157@2759
EC2.7.6.5
COG Functional cat.KT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionGTP diphosphokinase
Ec32 orthologEc-12_008850.1
Exons3
Model size888
Cds size888
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10247.291.1prot_L-elsbetiae_contig10247.291.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10247 4905..6683 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815254.4612525-CDS-L-elsbetiae_contig10247:4904..51261622815254.4612525-CDS-L-elsbetiae_contig10247:4904..5126Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10247 4905..5126 -
1691682798.5093486-CDS-L-elsbetiae_contig10247:4904..51261691682798.5093486-CDS-L-elsbetiae_contig10247:4904..5126Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10247 4905..5126 -
1622815254.4737313-CDS-L-elsbetiae_contig10247:5809..62711622815254.4737313-CDS-L-elsbetiae_contig10247:5809..6271Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10247 5810..6271 -
1691682798.5203605-CDS-L-elsbetiae_contig10247:5809..62711691682798.5203605-CDS-L-elsbetiae_contig10247:5809..6271Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10247 5810..6271 -
1622815254.4852018-CDS-L-elsbetiae_contig10247:6479..66831622815254.4852018-CDS-L-elsbetiae_contig10247:6479..6683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10247 6480..6683 -
1691682798.529171-CDS-L-elsbetiae_contig10247:6479..66831691682798.529171-CDS-L-elsbetiae_contig10247:6479..6683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10247 6480..6683 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10247.291.1

>prot_L-elsbetiae_contig10247.291.1 ID=prot_L-elsbetiae_contig10247.291.1|Name=mRNA_L-elsbetiae_contig10247.291.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=296bp
FLLQLAEEVVLQHRIKEPYSMWKKMKRQGGGVDSVYDAVALRAVIKAKRM
PGESDHALEERSKQLCYHAMAVAKKMYPTVEGRCKDYVMSPKPNGYQSLH
STHEASVSPGAAASADGERHTHFELQVRSACMHHKAEYGHAAHWSYKSDG
SKDEEEEDDDVDDVEGAAAGRRTWKSYERPVASGARRKRKRRAKSHSAAV
PESVSSGRELITWLHLELRQRKVFVFGPDNLIWELDKASATAGNVLGRTH
AAGIRLIDGGAAAGKTGITLVNGKAVPLHYAFKNGDVLDLDLAMA*
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mRNA from alignment at L-elsbetiae_contig10247:4905..6683-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10247.291.1 ID=mRNA_L-elsbetiae_contig10247.291.1|Name=mRNA_L-elsbetiae_contig10247.291.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1779bp|location=Sequence derived from alignment at L-elsbetiae_contig10247:4905..6683- (Laminarionema elsbetiae ELsaHSoW15)
TTTCTTTTGCAGCTTGCCGAGGAAGTGGTCCTTCAGCACCGCATCAAGGA GCCTTACTCGATGTGGAAGAAGATGAAGCGCCAGGGCGGGGGGGTCGACA GTGTGTACGACGCGGTCGCGCTTCGAGCGGTTATCAAGGCCAAGCGGATG CCGGGAGAGAGCGACCACGCCCTCGAGGAGAGATCGAAGCAGCTCTGCTA CCACGTGAGTTGCCTTTTTTTTTGTCGTGGCCATTTTCTTTCGTTTGCTG TTGCAGGAAGGGATCAAATCACCCCGGCCCCTTAGACGTTCTTGGTCTCA ACGTTTCATGTTGTCGGTTGTGTCCCGTCGCCCTTTTTTGATCGGTTCTT CTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTAT TCTTCTCCTCAGGCGATGGCGGTGGCGAAGAAGATGTACCCTACCGTGGA AGGGCGCTGCAAGGACTACGTCATGTCCCCGAAGCCGAACGGGTACCAGA GCCTCCACAGCACGCACGAGGCCTCCGTGTCTCCGGGGGCCGCCGCCTCC GCCGACGGGGAACGCCACACGCACTTCGAGCTGCAGGTGCGCAGCGCGTG CATGCACCACAAGGCCGAGTACGGCCACGCCGCCCACTGGAGCTACAAGA GCGACGGCAGCAAGGACGAGGAGGAGGAGGATGATGATGTCGACGATGTG GAGGGGGCCGCCGCCGGGAGGAGAACGTGGAAGTCCTACGAGCGTCCCGT GGCGTCGGGGGCCCGTCGGAAGAGGAAGAGGAGGGCTAAGTCCCACTCCG CCGCCGTCCCCGAGAGCGTGTCGTCCGGCAGGGAGCTGATCACCTGGCTG CACCTTGAGCTCCGGCAGCGAAAGGTGTGCGCGCGCTTGTGTGTGTGTCT CGTCGTTGATTGGTTCGCTTGTACAGCACAGCAGCGTGCAGGCAGTGAAG AGCTACATAGCCTGCCTGCCATCATACGGGCATCTTCCGATAGGGAAGGG GAGATGAAGGTCTATTATCACAGCAGTAGTAGTCTGGAATTGTTGACCGG TCTTGTTTTTTTTTTGTCGCTTTTGCACGCAGTGTGTTGGGGTGGTGCCA ACAGGAGTTGCAGATATCCCCATCGATTCTCTTGCATAAGATAGTGCCGC CGGTGCCTTTCAAGAAGAAATAAATCAGGAACTCAAAGAGGGAACCTCCC CACGCAAGAAACAGCGGTTCTTTTGACAGTCCGCTGTTGACAGTCCAGTC TTGATATTAGAAAATAAATGAGAGAATCAAAGAAGGAACCTCCCCACACA AGAAACCGCGGTCTCTGTGTGGTGAATGAAATAATAATTCCATTCAGCAG TGATGTTTTCTTGATCCGGCCGAATAAAAAAACACCCCAAAACGTGAAAA AGTTCACCACCTCCCCTGTACAACTCTGCCAGGTCAAACGGCATGTATGT ATGTCTTTCTGTTGTTTCAACTTTTTCGGCTCTTCATTTCTCGTACCGAA CCGAATGTAACCAATATTCCCGTTCGGCCAAAACTTTTGTCTTGCACTAA ATACCAGGTGTTCGTCTTCGGCCCCGACAATCTCATCTGGGAGCTCGACA AGGCTTCGGCGACGGCGGGGAACGTACTCGGCCGCACGCACGCGGCGGGC ATCCGCCTGATTGACGGGGGCGCCGCGGCGGGCAAGACCGGCATCACCCT CGTGAACGGAAAGGCCGTGCCCCTGCACTACGCGTTCAAGAACGGCGACG TTCTCGACCTCGATCTCGCCATGGCTTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10247:4905..6683-

>mRNA_L-elsbetiae_contig10247.291.1 ID=mRNA_L-elsbetiae_contig10247.291.1|Name=mRNA_L-elsbetiae_contig10247.291.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1776bp|location=Sequence derived from alignment at L-elsbetiae_contig10247:4905..6683- (Laminarionema elsbetiae ELsaHSoW15)
TTTCTTTTGCAGCTTGCCGAGGAAGTGGTCCTTCAGCACCGCATCAAGGA
GCCTTACTCGATGTGGAAGAAGATGAAGCGCCAGGGCGGGGGGGTCGACA
GTGTGTACGACGCGGTCGCGCTTCGAGCGGTTATCAAGGCCAAGCGGATG
CCGGGAGAGAGCGACCACGCCCTCGAGGAGAGATCGAAGCAGCTCTGCTA
CCACTTTCTTTTGCAGCTTGCCGAGGAAGTGGTCCTTCAGCACCGCATCA
AGGAGCCTTACTCGATGTGGAAGAAGATGAAGCGCCAGGGCGGGGGGGTC
GACAGTGTGTACGACGCGGTCGCGCTTCGAGCGGTTATCAAGGCCAAGCG
GATGCCGGGAGAGAGCGACCACGCCCTCGAGGAGAGATCGAAGCAGCTCT
GCTACCACGCGATGGCGGTGGCGAAGAAGATGTACCCTACCGTGGAAGGG
CGCTGCAAGGACTACGTCATGTCCCCGAAGCCGAACGGGTACCAGAGCCT
CCACAGCACGCACGAGGCCTCCGTGTCTCCGGGGGCCGCCGCCTCCGCCG
ACGGGGAACGCCACACGCACTTCGAGCTGCAGGTGCGCAGCGCGTGCATG
CACCACAAGGCCGAGTACGGCCACGCCGCCCACTGGAGCTACAAGAGCGA
CGGCAGCAAGGACGAGGAGGAGGAGGATGATGATGTCGACGATGTGGAGG
GGGCCGCCGCCGGGAGGAGAACGTGGAAGTCCTACGAGCGTCCCGTGGCG
TCGGGGGCCCGTCGGAAGAGGAAGAGGAGGGCTAAGTCCCACTCCGCCGC
CGTCCCCGAGAGCGTGTCGTCCGGCAGGGAGCTGATCACCTGGCTGCACC
TTGAGCTCCGGCAGCGAAAGGCGATGGCGGTGGCGAAGAAGATGTACCCT
ACCGTGGAAGGGCGCTGCAAGGACTACGTCATGTCCCCGAAGCCGAACGG
GTACCAGAGCCTCCACAGCACGCACGAGGCCTCCGTGTCTCCGGGGGCCG
CCGCCTCCGCCGACGGGGAACGCCACACGCACTTCGAGCTGCAGGTGCGC
AGCGCGTGCATGCACCACAAGGCCGAGTACGGCCACGCCGCCCACTGGAG
CTACAAGAGCGACGGCAGCAAGGACGAGGAGGAGGAGGATGATGATGTCG
ACGATGTGGAGGGGGCCGCCGCCGGGAGGAGAACGTGGAAGTCCTACGAG
CGTCCCGTGGCGTCGGGGGCCCGTCGGAAGAGGAAGAGGAGGGCTAAGTC
CCACTCCGCCGCCGTCCCCGAGAGCGTGTCGTCCGGCAGGGAGCTGATCA
CCTGGCTGCACCTTGAGCTCCGGCAGCGAAAGGTGTTCGTCTTCGGCCCC
GACAATCTCATCTGGGAGCTCGACAAGGCTTCGGCGACGGCGGGGAACGT
ACTCGGCCGCACGCACGCGGCGGGCATCCGCCTGATTGACGGGGGCGCCG
CGGCGGGCAAGACCGGCATCACCCTCGTGAACGGAAAGGCCGTGCCCCTG
CACTACGCGTTCAAGAACGGCGACGTTCTCGACCTCGATCTCGCCATGGC
TTGAGTGTTCGTCTTCGGCCCCGACAATCTCATCTGGGAGCTCGACAAGG
CTTCGGCGACGGCGGGGAACGTACTCGGCCGCACGCACGCGGCGGGCATC
CGCCTGATTGACGGGGGCGCCGCGGCGGGCAAGACCGGCATCACCCTCGT
GAACGGAAAGGCCGTGCCCCTGCACTACGCGTTCAAGAACGGCGACGTTC
TCGACCTCGATCTCGCCATGGCTTGA
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