mRNA_L-elsbetiae_contig1012.171.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1012.171.1 vs. uniprot
Match: D7FT47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI) HSP 1 Score: 906 bits (2342), Expect = 0.000e+0 Identity = 557/844 (66.00%), Postives = 626/844 (74.17%), Query Frame = 1 Query: 10 MVDYSKWDKLDSDSXXXXXXXSSNAVVAKQN--QATPTSEAKRVLDQAEVLRLQGNSAYERGDVLKAIGAYDAQLRVLEGRKDEASVEMICGALLNQASGFIRLKKFGEAEARCSRLLACTTPSGGVKVTGGATARTRALHFRGFARLQQGLFEGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMASCPDPEAKGRAELLRQGQGREAAQHFRDAASRARXXXXXXXXXXXXXSRSGGDEAAVALARNLRMEGVAVAMAGDRSSAELLLRAALRELRVGXXXXXXXXXXXXXXXXXXXEGLALAALGSLLAQEGKHANAVNTLREAVSVLDGAIAGASAKQSRVVDS---TNARSSQPSSPITEARTTALTRTLTGTLAFLGTSIVALEANPAPN------------DGGXXXXXXXXXXXXXXXXXXXXXXXXKNPATTAKADESPGGDDEDEAVRALKRAHGILKAEEAAIAAAAPGQQSSSAVSNLTGAESGGVGEVRKQTAKVLDTLSEAYAGKGRWELARSAAEQSLTAWRSLGDAGRAGAAASLLSLGHLVLQLHGVGAGIEEASARWEEAAKCFNECAERPSDAAEVCLKIAGFYTKVVRSDHSRLESLGEKIAIHYAKAADLFARERVEKTSSLRQSAAAVATAEAPQNTVVEVSGTSKTLPPLPSSVVDSLESDGRSRWELAEKEAFAWEGYAGAVGDDRQAATKALRWAEGLLDHASVSERDERWTLRKVGVLHSLALALAQGGEHAMAEEKLVEAIRQLRELDGVDPDAEDCAHKETLTDLFKYLAIARRARGDLPGAKEALAKVESLGGSKGREGVEGLDRLMAENKITV 2490 MVDYSKWD LDSD A ++ KR LDQAE LRLQGNSAYE GDV KAI AYDAQLRVLEGRKDEA+VEM CGALLNQASGFI LKKF EAEARCSRLLA TP GG K GGA ARTRALHFRGFAR + GLF+GACSDLRSSLAAGTSSGDEARALLLEAEAGAAM+SCPDPEA+GR E LRQG+GREAA+ FRDAASRAR + G VAL+RNLR+EG+AVAMAGD SAE+LLR ALR+LRVG XXXXXXXXXXXXX EGL LAALGSLLAQ GKHA+A+ LREAV+VLD AIAG SA + V +S TNARSS P+ ITE R TALTRTLTGTLAFLGTS++A E P+ N GG K P A + E+ + DEA+ LKRAH +LKAE A+A A PGQ+ A ES G +VRKQTAKVLDTLSEAY + RWE AR AAEQSLTAWRSLG AGR GAAASLLSLGHL+LQLHGVGAG EEASARWEEAA CF CAERPS AEV LKIAG+YTKV RSD +RLESL KI+ HY++AA LFARER EKTSSL+++A AVA A+AP++ E SG+++ +PPLP +VDSLE DGRSRWELAE+EAFAWEGYAGA G+D +AA AL AE LLDHASVS++DERWTLRKVGVLHSLALALA+ GEHAMAE KL+EAIR+L++LDGVD AE C HK TLTDL+KYLAI RRARGD GAK ALAKVE+LGG +G E +EGL+RL+AE+ ++V Sbjct: 1 MVDYSKWDNLDSDDSGSGSDGXXXXXXXXXXXPSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARFRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGR-EHLRQGRGREAAKSFRDAASRARRRKDAAGAE----AGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRTALRDLRVGGXXXXXXXXXXXXXEE---EGLTLAALGSLLAQRGKHADALEPLREAVAVLDEAIAGVSANEGGVANSSAGTNARSSPPTPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSSGGVTPGVMKGGAEKVTVPAPGFSCDDKGPIV-ADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAGPGQKGGLAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEQEAFAWEGYAGAAGEDHEAAVTALAKAEKLLDHASVSDKDERWTLRKVGVLHSLALALARSGEHAMAENKLLEAIRELQQLDGVDSIAEACVHKGTLTDLYKYLAIVRRARGDFAGAKAALAKVETLGGCEGSEELEGLNRLLAESAVSV 835 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1012.171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1012.171.1 >prot_L-elsbetiae_contig1012.171.1 ID=prot_L-elsbetiae_contig1012.171.1|Name=mRNA_L-elsbetiae_contig1012.171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=829bp MVDYSKWDKLDSDSDSNSDSGSSNAVVAKQNQATPTSEAKRVLDQAEVLRback to top mRNA from alignment at L-elsbetiae_contig1012:9286..19478+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1012.171.1 ID=mRNA_L-elsbetiae_contig1012.171.1|Name=mRNA_L-elsbetiae_contig1012.171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10193bp|location=Sequence derived from alignment at L-elsbetiae_contig1012:9286..19478+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1012:9286..19478+ >mRNA_L-elsbetiae_contig1012.171.1 ID=mRNA_L-elsbetiae_contig1012.171.1|Name=mRNA_L-elsbetiae_contig1012.171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4974bp|location=Sequence derived from alignment at L-elsbetiae_contig1012:9286..19478+ (Laminarionema elsbetiae ELsaHSoW15)back to top |