prot_L-elsbetiae_contig1012.171.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1012.171.1
Unique Nameprot_L-elsbetiae_contig1012.171.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length829
Homology
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BLAST of mRNA_L-elsbetiae_contig1012.171.1 vs. uniprot
Match: D7FT47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI)

HSP 1 Score: 909 bits (2348), Expect = 0.000e+0
Identity = 557/844 (66.00%), Postives = 626/844 (74.17%), Query Frame = 0 
Query:    1 MVDYSKWDKLDSDSXXXXXXXSSNAVVAKQN--QATPTSEAKRVLDQAEVLRLQGNSAYERGDVLKAIGAYDAQLRVLEGRKDEASVEMICGALLNQASGFIRLKKFGEAEARCSRLLACTTPSGGVKVTGGATARTRALHFRGFARLQQGLFEGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMASCPDPEAKGRAELLRQGQGREAAQHFRDAASRARXXXXXXXXXXXXXSRSGGDEAAVALARNLRMEGVAVAMAGDRSSAELLLRAALRELRVGXXXXXXXXXXXXXXXXXXXEGLALAALGSLLAQEGKHANAVNTLREAVSVLDGAIAGASAKQSRVVDS---TNARSSQPSSPITEARTTALTRTLTGTLAFLGTSIVALEANPAPN------------DGGXXXXXXXXXXXXXXXXXXXXXXXXKNPATTAKADESPGGDDEDEAVRALKRAHGILKAEEAAIAAAAPGQQSSSAVSNLTGAESGGVGEVRKQTAKVLDTLSEAYAGKGRWELARSAAEQSLTAWRSLGDAGRAGAAASLLSLGHLVLQLHGVGAGIEEASARWEEAAKCFNECAERPSDAAEVCLKIAGFYTKVVRSDHSRLESLGEKIAIHYAKAADLFARERVEKTSSLRQSAAAVATAEAPQNTVVEVSGTSKTLPPLPSSVVDSLESDGRSRWELAEKEAFAWEGYAGAVGDDRQAATKALRWAEGLLDHASVSERDERWTLRKVGVLHSLALALAQGGEHAMAEEKLVEAIRQLRELDGVDPDAEDCAHKETLTDLFKYLAIARRARGDLPGAKEALAKVESLGGSKGREGVEGLDRLMAENKITV 827
            MVDYSKWD LDSD                     A   ++ KR LDQAE LRLQGNSAYE GDV KAI AYDAQLRVLEGRKDEA+VEM CGALLNQASGFI LKKF EAEARCSRLLA  TP GG K  GGA ARTRALHFRGFAR + GLF+GACSDLRSSLAAGTSSGDEARALLLEAEAGAAM+SCPDPEA+GR E LRQG+GREAA+ FRDAASRAR             +  G     VAL+RNLR+EG+AVAMAGD  SAE+LLR ALR+LRVG XXXXXXXXXXXXX     EGL LAALGSLLAQ GKHA+A+  LREAV+VLD AIAG SA +  V +S   TNARSS P+  ITE R TALTRTLTGTLAFLGTS++A E  P+ N             GG                        K P   A + E+    + DEA+  LKRAH +LKAE  A+A A PGQ+   A       ES G  +VRKQTAKVLDTLSEAY  + RWE AR AAEQSLTAWRSLG AGR GAAASLLSLGHL+LQLHGVGAG EEASARWEEAA CF  CAERPS  AEV LKIAG+YTKV RSD +RLESL  KI+ HY++AA LFARER EKTSSL+++A AVA A+AP++   E SG+++ +PPLP  +VDSLE DGRSRWELAE+EAFAWEGYAGA G+D +AA  AL  AE LLDHASVS++DERWTLRKVGVLHSLALALA+ GEHAMAE KL+EAIR+L++LDGVD  AE C HK TLTDL+KYLAI RRARGD  GAK ALAKVE+LGG +G E +EGL+RL+AE+ ++V
Sbjct:    1 MVDYSKWDNLDSDDSGSGSDGXXXXXXXXXXXPSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARFRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGR-EHLRQGRGREAAKSFRDAASRARRRKDAAGAE----AGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRTALRDLRVGGXXXXXXXXXXXXXEE---EGLTLAALGSLLAQRGKHADALEPLREAVAVLDEAIAGVSANEGGVANSSAGTNARSSPPTPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSSGGVTPGVMKGGAEKVTVPAPGFSCDDKGPIV-ADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAGPGQKGGLAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEQEAFAWEGYAGAAGEDHEAAVTALAKAEKLLDHASVSDKDERWTLRKVGVLHSLALALARSGEHAMAENKLLEAIRELQQLDGVDSIAEACVHKGTLTDLYKYLAIVRRARGDFAGAKAALAKVETLGGCEGSEELEGLNRLLAESAVSV 835
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1012.171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT47_ECTSI0.000e+066.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 135..168
e-value: 230.0
score: 3.0
coord: 725..758
e-value: 63.0
score: 7.9
coord: 775..808
e-value: 360.0
score: 1.3
coord: 46..79
e-value: 59.0
score: 8.2
coord: 490..523
e-value: 200.0
score: 3.6
coord: 300..333
e-value: 67.0
score: 7.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 433..642
e-value: 6.3E-8
score: 34.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 26..332
e-value: 4.2E-13
score: 50.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 45..590
NoneNo IPR availablePANTHERPTHR46423FAMILY NOT NAMEDcoord: 2..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1012contigL-elsbetiae_contig1012:9295..19014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1012.171.1mRNA_L-elsbetiae_contig1012.171.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1012 9286..19478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1012.171.1 ID=prot_L-elsbetiae_contig1012.171.1|Name=mRNA_L-elsbetiae_contig1012.171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=829bp
MVDYSKWDKLDSDSDSNSDSGSSNAVVAKQNQATPTSEAKRVLDQAEVLR
LQGNSAYERGDVLKAIGAYDAQLRVLEGRKDEASVEMICGALLNQASGFI
RLKKFGEAEARCSRLLACTTPSGGVKVTGGATARTRALHFRGFARLQQGL
FEGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMASCPDPEAKGRAELL
RQGQGREAAQHFRDAASRARRRKETAGAAGGGESRSGGDEAAVALARNLR
MEGVAVAMAGDRSSAELLLRAALRELRVGGGGSSGVCSAGGGGAAEEEEG
LALAALGSLLAQEGKHANAVNTLREAVSVLDGAIAGASAKQSRVVDSTNA
RSSQPSSPITEARTTALTRTLTGTLAFLGTSIVALEANPAPNDGGNGGGI
TRGATKDAAGGGTDAATDAKNPATTAKADESPGGDDEDEAVRALKRAHGI
LKAEEAAIAAAAPGQQSSSAVSNLTGAESGGVGEVRKQTAKVLDTLSEAY
AGKGRWELARSAAEQSLTAWRSLGDAGRAGAAASLLSLGHLVLQLHGVGA
GIEEASARWEEAAKCFNECAERPSDAAEVCLKIAGFYTKVVRSDHSRLES
LGEKIAIHYAKAADLFARERVEKTSSLRQSAAAVATAEAPQNTVVEVSGT
SKTLPPLPSSVVDSLESDGRSRWELAEKEAFAWEGYAGAVGDDRQAATKA
LRWAEGLLDHASVSERDERWTLRKVGVLHSLALALAQGGEHAMAEEKLVE
AIRQLRELDGVDPDAEDCAHKETLTDLFKYLAIARRARGDLPGAKEALAK
VESLGGSKGREGVEGLDRLMAENKITVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf