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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 663 |
Cds size | 507 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815242.67044-UTR-L-elsbetiae_contig10108:4782..4910 | 1622815242.67044-UTR-L-elsbetiae_contig10108:4782..4910 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10108 4783..4910 + |
1691682791.4044662-UTR-L-elsbetiae_contig10108:4782..4910 | 1691682791.4044662-UTR-L-elsbetiae_contig10108:4782..4910 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10108 4783..4910 + |
1622815242.6966004-UTR-L-elsbetiae_contig10108:5417..5445 | 1622815242.6966004-UTR-L-elsbetiae_contig10108:5417..5445 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10108 5418..5445 + |
1691682791.4370167-UTR-L-elsbetiae_contig10108:5417..5445 | 1691682791.4370167-UTR-L-elsbetiae_contig10108:5417..5445 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig10108 5418..5445 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815242.6869762-CDS-L-elsbetiae_contig10108:4910..5417 | 1622815242.6869762-CDS-L-elsbetiae_contig10108:4910..5417 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10108 4911..5417 + |
1691682791.4286716-CDS-L-elsbetiae_contig10108:4910..5417 | 1691682791.4286716-CDS-L-elsbetiae_contig10108:4910..5417 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig10108 4911..5417 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10108.161.1 >prot_L-elsbetiae_contig10108.161.1 ID=prot_L-elsbetiae_contig10108.161.1|Name=mRNA_L-elsbetiae_contig10108.161.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp
MKLAAVENDKTVPGRNYNLAPVSPSLLPVSADASTTPSYPSIDRRTCLCA LFCSASRCQKFRVISRTCWGEVTSHERNSAPAGQEPPSTHVLRNSLKLDA QENMGHKCRHRLAGASQPRTHVARIIAGACRMRVTVSNQILQRPFLPSRY KRGHISKTSLAKKECRIT* back to topmRNA from alignment at L-elsbetiae_contig10108:4783..5445+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig10108.161.1 ID=mRNA_L-elsbetiae_contig10108.161.1|Name=mRNA_L-elsbetiae_contig10108.161.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=663bp|location=Sequence derived from alignment at L-elsbetiae_contig10108:4783..5445+ (Laminarionema elsbetiae ELsaHSoW15) GCTGGTAAAATGAAACTCACCTAAAGGGTCGCAGAAGCGACACCCAGTAA
GTTGCCTCCTCCGAACATCACATATATCTCGTGGTAAGAGCGGGCAAACG
TGTTCTAGCTGTGCAGCCCCTCCCTACGATGAAACTCGCCGCTGTCGAGA
ACGACAAAACAGTTCCTGGTAGAAACTACAATCTTGCCCCCGTCTCACCA
TCCTTACTACCGGTGAGTGCCGATGCATCTACGACACCTTCCTATCCGTC
GATAGATCGCCGCACATGCTTGTGCGCCCTTTTCTGCTCAGCCTCTCGGT
GTCAAAAGTTCCGAGTTATCTCTCGCACATGTTGGGGTGAAGTTACGTCC
CACGAGAGAAACAGCGCACCGGCGGGCCAAGAACCCCCCTCCACACATGT
GTTAAGGAACTCGCTAAAGCTCGATGCCCAAGAAAACATGGGGCATAAAT
GCCGGCATCGCCTCGCTGGCGCCAGTCAACCTAGAACGCACGTTGCTAGA
ATTATTGCAGGGGCCTGCAGAATGAGAGTGACTGTGAGTAATCAGATCCT
GCAGCGCCCCTTTTTACCCAGCAGGTACAAAAGGGGCCACATTTCAAAAA
CTTCTTTGGCGAAGAAAGAGTGCCGAATCACATGACACACCCTCATTGCC
TAGCGCAGATGCT back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig10108:4783..5445+ >mRNA_L-elsbetiae_contig10108.161.1 ID=mRNA_L-elsbetiae_contig10108.161.1|Name=mRNA_L-elsbetiae_contig10108.161.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig10108:4783..5445+ (Laminarionema elsbetiae ELsaHSoW15) ATGAAACTCGCCGCTGTCGAGAACGACAAAACAGTTCCTGGTAGAAACTA CAATCTTGCCCCCGTCTCACCATCCTTACTACCGGTGAGTGCCGATGCAT CTACGACACCTTCCTATCCGTCGATAGATCGCCGCACATGCTTGTGCGCC CTTTTCTGCTCAGCCTCTCGGTGTCAAAAGTTCCGAGTTATCTCTCGCAC ATGTTGGGGTGAAGTTACGTCCCACGAGAGAAACAGCGCACCGGCGGGCC AAGAACCCCCCTCCACACATGTGTTAAGGAACTCGCTAAAGCTCGATGCC CAAGAAAACATGGGGCATAAATGCCGGCATCGCCTCGCTGGCGCCAGTCA ACCTAGAACGCACGTTGCTAGAATTATTGCAGGGGCCTGCAGAATGAGAG TGACTGTGAGTAATCAGATCCTGCAGCGCCCCTTTTTACCCAGCAGGTAC AAAAGGGGCCACATTTCAAAAACTTCTTTGGCGAAGAAAGAGTGCCGAAT CACATGAATGAAACTCGCCGCTGTCGAGAACGACAAAACAGTTCCTGGTA GAAACTACAATCTTGCCCCCGTCTCACCATCCTTACTACCGGTGAGTGCC GATGCATCTACGACACCTTCCTATCCGTCGATAGATCGCCGCACATGCTT GTGCGCCCTTTTCTGCTCAGCCTCTCGGTGTCAAAAGTTCCGAGTTATCT CTCGCACATGTTGGGGTGAAGTTACGTCCCACGAGAGAAACAGCGCACCG GCGGGCCAAGAACCCCCCTCCACACATGTGTTAAGGAACTCGCTAAAGCT CGATGCCCAAGAAAACATGGGGCATAAATGCCGGCATCGCCTCGCTGGCG CCAGTCAACCTAGAACGCACGTTGCTAGAATTATTGCAGGGGCCTGCAGA ATGAGAGTGACTGTGAGTAATCAGATCCTGCAGCGCCCCTTTTTACCCAG CAGGTACAAAAGGGGCCACATTTCAAAAACTTCTTTGGCGAAGAAAGAGT GCCGAATCACATGA back to top
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