prot_L-digitata_M_contig98011.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98011.1.1
Unique Nameprot_L-digitata_M_contig98011.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length91
Homology
[Close]
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 8.030e-26
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHETGNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCY 90
            M WR LI AG +R+W P+LEE+ RE  Q+GVAV GGVE + + A+  H+TG+W+V TDC N F+  KRTA++ + A  VP L   +A+CY
Sbjct:   86 MTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCY 175
[Close]
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 2.800e-25
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHETGNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCY 90
            M WR LI AG +RQW P+LEE+ RE  Q+GVAV GGVE + + A+  H+TGNW++ TDC N F+  KRTA++ + A  +P L   +A+CY
Sbjct:  624 MTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCY 713
[Close]
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.060e-24
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHETGNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCY 90
            M WR LI AG +R+W P+LEE+ RE  Q+GVAV GGVE + + A+  H+TG+W+V TDC N F+  KRTA++ + A  VP L   +A+CY
Sbjct:  176 MTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCY 265
[Close]
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.810e-24
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHETGNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCY 90
            M WR LI AG +R+W P+LEE+ RE  Q+GVAV GGVE + + A+  H+TG+W+V TDC N F+  KRTA++ + A  VP L   +A+CY
Sbjct:   42 MTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCY 131
[Close]
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.340e-24
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHETGNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCY 90
            M WR LI AG +R+W P+LEE+ RE  Q+GVAV GGVE + + A+  H+TG+W+V TDC N F+  KRTA++ + A  VP L   +A+CY
Sbjct:   85 MTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCY 174
[Close]
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Match: A0A6H5KUZ8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ8_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.360e-24
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHETGNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCY 90
            M WR LI AG +R+W P+LEE+ RE  Q+GVAV GGVE + + A+  H+TG+W+V TDC N F+  KRTA++ + A  VP L   +A+CY
Sbjct:   42 MTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCY 131
[Close]
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.400e-24
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHETGNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCY 90
            M WR LI AG +R+W P+LEE+ RE  Q+GVAV GGVE + + A+  H+TG+W+V TDC N F+  KRTA++ + A  VP L   +A+CY
Sbjct:  461 MTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCY 550
[Close]
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.410e-24
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHETGNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCY 90
            M WR LI AG +R+W P+LEE+ RE  Q+GVAV GGVE + + A+  H+TG+W+V TDC N F+  KRTA++ + A  VP L   +A+CY
Sbjct:  475 MTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCY 564
[Close]
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.440e-24
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:    1 MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHETGNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCY 90
            M WR LI AG +R+W P+LEE+ RE  Q+GVAV GGVE + + A+  H+TG+W+V TDC N F+  KRTA++ + A  VP L   +A+CY
Sbjct:  454 MTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCY 543
[Close]
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Match: A0A6H5KJS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS3_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 3.290e-24
Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 0 
Query:    1 MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHETGNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCY 90
            M WR LI AG +R+W P+LEE+ RE  Q+GVAV GGVE + + A+  H+TG W++ TDC N F+  KRTA++ + A  VP L   +A+CY
Sbjct:  659 MTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGQWVIQTDCSNTFNTGKRTAIMAQAATSVPDLVGYIARCY 748
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98011.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5L4Y4_9PHAE8.030e-2651.11Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE2.800e-2551.11Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE1.060e-2451.11Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDD0_9PHAE1.810e-2451.11Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE2.340e-2451.11Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KUZ8_9PHAE2.360e-2451.11Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KA96_9PHAE2.400e-2451.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI32_9PHAE2.410e-2451.11Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE2.440e-2451.11Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJS3_9PHAE3.290e-2450.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98011contigL-digitata_M_contig98011:187..459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98011.1.1mRNA_L-digitata_M_contig98011.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98011 187..474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98011.1.1 ID=prot_L-digitata_M_contig98011.1.1|Name=mRNA_L-digitata_M_contig98011.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=91bp
MAWRTLITAGAMRQWGPRLEEVNREVRQYGVAVPGGVEHIGLRARTRHET
GNWLVLTDCPNDFHAVKRTAVLQEVANCVPALTPSVAKCYG
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