prot_L-digitata_M_contig97569.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig97569.1.1
Unique Nameprot_L-digitata_M_contig97569.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length55
Homology
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Match: D7G1I0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I0_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.170e-28
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 KVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 55
            +VAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ
Sbjct:  616 QVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 670          
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Match: A0A6H5L043_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L043_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.180e-28
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 KVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 55
            +VAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ
Sbjct:  626 QVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 680          
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Match: A0A7S2SQY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 5.640e-23
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    1 KVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 55
            +VAHLERSGHYLTVKDNQVVSIHPSSVLD KP W +FEEFVLTSKN++RTVT V+
Sbjct:  633 QVAHLERSGHYLTVKDNQVVSIHPSSVLDQKPPWVLFEEFVLTSKNFVRTVTAVR 687          
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Match: A0A7S4HFT3_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HFT3_9EUKA)

HSP 1 Score: 92.8 bits (229), Expect = 1.510e-22
Identity = 40/55 (72.73%), Postives = 50/55 (90.91%), Query Frame = 0
Query:    1 KVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 55
            +VAHLER+GHYLTVKDNQVV++HPS+VL +KP WC++ EFVLTSKNYIR VT ++
Sbjct:   76 QVAHLERTGHYLTVKDNQVVALHPSTVLQHKPEWCLYNEFVLTSKNYIRQVTDIK 130          
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Match: A0A6V7WL27_9BILA (Hypothetical protein n=2 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7WL27_9BILA)

HSP 1 Score: 93.6 bits (231), Expect = 1.580e-22
Identity = 40/55 (72.73%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    1 KVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 55
            +VAHLERSGHY+T+KDNQ+V++HPSSVLD+KP W ++ EFVLT+KNYIRTVT V+
Sbjct:  108 QVAHLERSGHYVTIKDNQIVNLHPSSVLDHKPEWALYNEFVLTTKNYIRTVTDVR 162          
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Match: A0A0M3KHY3_ANISI (OB_NTP_bind domain-containing protein n=2 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3KHY3_ANISI)

HSP 1 Score: 92.0 bits (227), Expect = 2.880e-22
Identity = 40/55 (72.73%), Postives = 50/55 (90.91%), Query Frame = 0
Query:    1 KVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 55
            +VAHLERSGHY+TVKDNQ+V +HPS+VLD+KP W ++ EFVLT+KNYIRTVT V+
Sbjct:   69 QVAHLERSGHYITVKDNQLVQLHPSTVLDHKPEWALYNEFVLTTKNYIRTVTDVK 123          
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Match: A0A437AY47_CHISP (OB_NTP_bind domain-containing protein n=3 Tax=Obtectomera TaxID=104431 RepID=A0A437AY47_CHISP)

HSP 1 Score: 89.7 bits (221), Expect = 3.960e-22
Identity = 39/55 (70.91%), Postives = 49/55 (89.09%), Query Frame = 0
Query:    1 KVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 55
            +VAHLER+GHYLTVKDNQVV +HPS+ LD+KP W ++ EFVLT+KNYIRTVT ++
Sbjct:    2 QVAHLERTGHYLTVKDNQVVQLHPSTCLDHKPDWVLYNEFVLTTKNYIRTVTDIK 56          
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Match: A0A2G9TNG8_TELCI (OB_NTP_bind domain-containing protein n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9TNG8_TELCI)

HSP 1 Score: 89.4 bits (220), Expect = 5.040e-22
Identity = 38/55 (69.09%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    1 KVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 55
            +VAHL+RSGHY+TVKDNQ+V++HPS+VLD+KP W ++ EFVLT+KN+IRTVT V+
Sbjct:   37 QVAHLQRSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVR 91          
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Match: A0A183B398_9TREM (HA2 domain-containing protein n=1 Tax=Echinostoma caproni TaxID=27848 RepID=A0A183B398_9TREM)

HSP 1 Score: 92.8 bits (229), Expect = 5.320e-22
Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 0
Query:    2 VAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 55
            VAHLER+GHYLTVKDNQVV +HPS+VLD+KP W ++ EFVLTSKNYIRTVT V+
Sbjct:  114 VAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTSKNYIRTVTEVK 167          
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Match: A0A2H2HWB8_CAEJA (OB_NTP_bind domain-containing protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2HWB8_CAEJA)

HSP 1 Score: 90.5 bits (223), Expect = 6.450e-22
Identity = 39/55 (70.91%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    1 KVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQ 55
            +VAHLERSGHY+TVKDNQ+V++HPS+VLD+KP W ++ EFVLT+KN+IRTVT V+
Sbjct:   47 QVAHLERSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVR 101          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig97569.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1I0_ECTSI2.170e-2898.18RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5L043_9PHAE2.180e-2898.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SQY7_9STRA5.640e-2383.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4HFT3_9EUKA1.510e-2272.73Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A6V7WL27_9BILA1.580e-2272.73Hypothetical protein n=2 Tax=Meloidogyne enterolob... [more]
A0A0M3KHY3_ANISI2.880e-2272.73OB_NTP_bind domain-containing protein n=2 Tax=Anis... [more]
A0A437AY47_CHISP3.960e-2270.91OB_NTP_bind domain-containing protein n=3 Tax=Obte... [more]
A0A2G9TNG8_TELCI5.040e-2269.09OB_NTP_bind domain-containing protein n=1 Tax=Tela... [more]
A0A183B398_9TREM5.320e-2277.78HA2 domain-containing protein n=1 Tax=Echinostoma ... [more]
A0A2H2HWB8_CAEJA6.450e-2270.91OB_NTP_bind domain-containing protein n=1 Tax=Caen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011709DEAD-box helicase, OB foldPFAMPF07717OB_NTP_bindcoord: 3..54
e-value: 2.0E-12
score: 47.3
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 1..54
NoneNo IPR availablePANTHERPTHR18934:SF217PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DEAH3-RELATEDcoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig97569contigL-digitata_M_contig97569:118..282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig97569.1.1mRNA_L-digitata_M_contig97569.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig97569 118..282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig97569.1.1 ID=prot_L-digitata_M_contig97569.1.1|Name=mRNA_L-digitata_M_contig97569.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=55bp
KVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRT
VTGVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011709DEAD-box_helicase_OB_fold