prot_L-digitata_M_contig10130.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10130.2.1
Unique Nameprot_L-digitata_M_contig10130.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length364
Homology
BLAST of mRNA_L-digitata_M_contig10130.2.1 vs. uniprot
Match: D7G6A8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A8_ECTSI)

HSP 1 Score: 560 bits (1444), Expect = 1.480e-198
Identity = 285/363 (78.51%), Postives = 314/363 (86.50%), Query Frame = 0
Query:    1 MSERMLLVQWTSDFESPGPNDEDGGNASTXXXXXGSPDRTSSLEEIFLDPGFFWSWERFEDRWTNYFGFSEEDLVATNVDVIENYNNLVCADLKKSFMKDTQFIKIINTDYFAPILTVNQHSSNKVLEEISSVDTFASLSNWLMRPVPTVTAAVRRFKERYFEDNYVIVMEMNLVADSSYGSAMQAAQQQLFFKEASDASYRAKGNLTPEQQGIVVLVVTDDEEAVRSRLSDLGQDSFGAAGVVAITGPRGSGTTRILTELQQAWLLGYGDVSIVSPASATGVLGHARMSLLPIVIVDSHTAHQSTSSQPCLADVGLIQQASCFSPGMLSRLSYDANVPCLGSPPATVTSSDAARGRMRRLEL 363
            MSER+LLVQWT   ES G ND   GN++T     G+   TSSLEEIFLDPGFFWSWERFEDRW NYFG++EEDL +T VDVI NYN+LVC +LK +FM DTQFIKI NT+YFAP+LTVNQH+S  VLEEI SVDTFASLSNWLMRPVPTVTAAVRRF+ERY EDNYVIVMEM+++ADS+ GS M AAQQQLFFKEASDASYRAKGNLTP+QQGIVVLVVTDDEE ++SR++DLGQDS GAAGVVAITGPRG GTTRILTELQQAWLLGYGDVSIVSPAS  GVLGHARMS+ PIVI+DSHTAHQSTSSQPCLAD+G +Q+ASCFS  MLSRLSYD NVPCLG PP TV S +AAR R R L L
Sbjct:   32 MSERVLLVQWTGSDESQGSNDIAAGNSTTAGESSGTSGSTSSLEEIFLDPGFFWSWERFEDRWLNYFGYAEEDLGSTVVDVIANYNSLVCDNLK-NFMGDTQFIKITNTEYFAPLLTVNQHASRTVLEEIPSVDTFASLSNWLMRPVPTVTAAVRRFRERYLEDNYVIVMEMDVLADSTGGSGMSAAQQQLFFKEASDASYRAKGNLTPDQQGIVVLVVTDDEEGLQSRVADLGQDSLGAAGVVAITGPRGFGTTRILTELQQAWLLGYGDVSIVSPASPIGVLGHARMSVSPIVILDSHTAHQSTSSQPCLADIGRVQEASCFSSAMLSRLSYDPNVPCLGDPPTTVNSCNAARDRARNLRL 393          
BLAST of mRNA_L-digitata_M_contig10130.2.1 vs. uniprot
Match: A0A6H5JJN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN7_9PHAE)

HSP 1 Score: 542 bits (1397), Expect = 1.400e-189
Identity = 285/365 (78.08%), Postives = 313/365 (85.75%), Query Frame = 0
Query:    1 MSERMLLVQWTSDFESPGPNDEDGGNASTXXXXXGSPDRTSSLEEIFLDPGFFWSWERFEDRWTNYFGFSEEDLVATNVDVIENYNNLVCADLKKSFMKDTQFIKIINTDYFAPILTVNQHSSNKVLEEISSVDTFASLSNWLMRPVPTVTAAVRRFKERYFEDNYVIVMEMNLVADSSYGSAMQAAQQQLFFKEASDASYRAKGNLTPEQQGIVVLVVTDDEEAVRSRLSDLGQDSFGAAGVVAITGPRGSGTTRILTELQQAWLLGYGDVSIVSPASATGVLGHARMSLLPIVIVDSHTAHQSTSSQPCLADVGLIQQASCFSPGMLSRLSYDANVPCLGSPPATVTSSDAARGRMR--RLEL 363
            MSER+LLVQWT   +S G           XXXXXG+   TSSLEEIFLDPGFFWSWERFEDRW NYFG++EEDL +T VDVI NYN+LVC +LK +FM DTQFIKI NT+YFAP+LTVNQH+   VLEEI SVDTFASLSNWLMRPVPTVTAAVRRF+ERYFEDNYVIVMEM+++AD++ GS M AAQQQLFFKEASDASYRAKGNLTP+QQG+VVLVVTDDEE ++SR++DLGQDS GAAGVVAITGPRG GTTRILTELQQAWLLGYGDVSIVSPAS  GVLGHARMS+ PIVIVDSHTAHQSTSSQPCLADVG +Q+A CFS  MLSRLSYD NVPCLG PP TV SS+ AR R R  RLEL
Sbjct:  151 MSERVLLVQWTGSDDSQGXXXXXXXXXXXXXXXXGTSGSTSSLEEIFLDPGFFWSWERFEDRWLNYFGYAEEDLGSTVVDVIANYNSLVCDNLK-NFMGDTQFIKITNTEYFAPLLTVNQHAGRTVLEEIPSVDTFASLSNWLMRPVPTVTAAVRRFRERYFEDNYVIVMEMDVLADTTGGSGMSAAQQQLFFKEASDASYRAKGNLTPDQQGVVVLVVTDDEEGLQSRVADLGQDSLGAAGVVAITGPRGFGTTRILTELQQAWLLGYGDVSIVSPASPIGVLGHARMSVSPIVIVDSHTAHQSTSSQPCLADVGRVQEARCFSSAMLSRLSYDPNVPCLGDPPRTVKSSNEARDRARNRRLEL 514          
BLAST of mRNA_L-digitata_M_contig10130.2.1 vs. uniprot
Match: A0A835YLY2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY2_9STRA)

HSP 1 Score: 339 bits (870), Expect = 2.450e-110
Identity = 183/348 (52.59%), Postives = 232/348 (66.67%), Query Frame = 0
Query:    1 MSERMLLVQWTSDFESPGPNDEDGGNASTXXXXXGSP----DRTSSLEEIFLDPGFFWSWERFEDRWTNYF--GFSEEDLVATNVDVIENYNNLVCADLKKSFMKDTQFIKIINTDYFAPILTVNQHSSNKVLEEISSVDTFASLSNWLMRPVPTVTAAVRRFKERYFEDNYVIVMEMNLVADSSYGSAMQAAQQQLFFKEASDASYRAKGNLTPEQQGIVVLVVTDDEEAVRSRLSDLGQDSFGAAGVVAITGPRGSGTTRILTELQQAWLLGYGDVSIVSPASATGVLGHARMSLLPIVIV-DSHTAHQSTSSQPCLADVGLIQQASCFSPGMLSRLSYDANVPCL 341
            +S R LLVQWT D+E+PGP+D  GG          +     +R SSLEEIFLDPGF+WSW+RF  RWT  F    +E D+V  NV        L C DL++  ++D QF+K+    YFAP L VN   ++ +  ++     FA LSNWL+RPVPTV  AV RF ERYFEDNYVI +EM+L         M AAQQ+ FF+EA+DA+YRA    T   +G+++LVVTDDEEA+R+RL    QD+ GAAG++AITGPRG+GT RILTELQ+ WLLGY DV IVSPAS TGV+GHAR    PIV+  D   AH S ++QPC AD+  ++ ASCF P ML++LS D  VPC+
Sbjct:   37 LSGRALLVQWTKDYEAPGPSDIGGGAGDWDYGANATAVPHDERRSSLEEIFLDPGFWWSWDRFMGRWTGRFERAAAEIDIVVVNVSA--EVEALACGDLRRWRVRD-QFVKVAGAHYFAPALAVNARHADALFAQLPRDQLFAYLSNWLLRPVPTVMTAVHRFAERYFEDNYVIGLEMSLWQALGEWGTMTAAQQKRFFQEAADATYRA----TQALRGVMILVVTDDEEALRARLKGQPQDALGAAGIIAITGPRGTGTRRILTELQEVWLLGYADVCIVSPASPTGVVGHARTGRAPIVVAADGGAAHASAATQPCFADLAALRAASCFRPDMLAQLSIDPEVPCV 377          
BLAST of mRNA_L-digitata_M_contig10130.2.1 vs. uniprot
Match: A0A7S2RPW9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPW9_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.120e-47
Identity = 123/356 (34.55%), Postives = 191/356 (53.65%), Query Frame = 0
Query:    1 MSERMLLVQWTSDFESPGPNDEDGGNASTXXXXXGSPDRTSSLEEIFLDPGFFWSWERFEDRWTNYFGFS------EEDLVATNVDVIENYNNLVCADLKKSFMKDTQFIKIINTDYFAPILTVNQHSSNKVLEEISSVDTFASLSNWLMRPVPTVTAAVRRFKERYFEDNYVIVMEMNLV-ADSSYGSA--MQAAQQQLFFKEASD-ASYRAKGNLTPEQQGIVVLVVTDDEEAVRSRLSDLGQDS-FGAAGVVAITGPRGSGTTRILTELQQAWLLGYGDVSIVSPASATGVLGHARMSLLPIVIVDSHTAHQSTSSQPCLADVGLIQQASCFSPGMLSRLSYDANVPCLGSPP 345
            +++R LLVQWTS + +P        N S+      + DR   L ++   PGF W+++ F   +    G        +  +V+   ++++    L C+++  + +   +F+++   +YF P+L VN + S  V EE+ +   FA L N+L+RP P +  ++ R K RY E N VI +EM ++    S+  A  M   QQ+ FF  AS   S  A   L    QG+V L VTD+   V++R  +L   S   +AGV+AI    G+G +R+  ELQ+ +LLG+  V + +P S  G++GHAR  L P+V VD  T HQST+  PC  +  LI++ +CF   ML +L  D  VPC GS P
Sbjct:  225 VTDRALLVQWTSSWTTPADVSAIPRNGSS------ASDRRVGLNDVLTAPGFSWNYDAFATAYRGTTGAFPALVPWDPLMVSAGGELVDAIEPLTCSNVA-TLLAPHKFVQVRTQEYFLPLLLVNPYYSY-VDEELPAQWAFADLMNFLIRPTPDIVDSIERVKIRYLEGNAVIGLEMAVMPGGGSWDGAGLMPLEQQRRFFSTASSLVSQDAISTLNTAGQGVVFLFVTDNPGEVQARFRELDSSSEVTSAGVIAILAVSGAGRSRVQLELQELFLLGHSTVLLTTPGSLLGIIGHARTRLSPLV-VDEDTVHQSTAPYPCFVNWDLIERTTCFHSSMLYKLPPDELVPC-GSLP 570          
BLAST of mRNA_L-digitata_M_contig10130.2.1 vs. uniprot
Match: A0A7S2UWL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWL4_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 6.390e-6
Identity = 35/123 (28.46%), Postives = 62/123 (50.41%), Query Frame = 0
Query:   45 EIFLDPGFFWSWERFEDRWTNYFGFSEEDLVATNVDVIENYNNLVCADLKKSFMKDTQFIKIINTD-------YFAPILTVNQHSSNKVLEEISSVDTFASLSNWLMRPVPTVTAAVRRFKER 160
            E+F  PGF W W   ++      G   +      +D +  + + +C+DL+ ++   ++ +++           YFA ++  N   +  + EE+     FA LSN+L+RP+P VT AV RF+ER
Sbjct:    1 ELFEPPGFAWEWAALQEA----LGEEGDLSKIPTLDPVAQFQSTICSDLR-TWDSGSKVVRLSTNSADGGPHQYFAALIAANPVFTF-LQEELPYDQLFALLSNFLLRPLPVVTYAVSRFRER 117          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10130.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G6A8_ECTSI1.480e-19878.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJN7_9PHAE1.400e-18978.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLY2_9STRA2.450e-11052.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RPW9_9STRA1.120e-4734.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2UWL4_9STRA6.390e-628.46Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10130contigL-digitata_M_contig10130:3865..8211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10130.2.1mRNA_L-digitata_M_contig10130.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10130 3865..8235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10130.2.1 ID=prot_L-digitata_M_contig10130.2.1|Name=mRNA_L-digitata_M_contig10130.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=364bp
MSERMLLVQWTSDFESPGPNDEDGGNASTGGDASGSPDRTSSLEEIFLDP
GFFWSWERFEDRWTNYFGFSEEDLVATNVDVIENYNNLVCADLKKSFMKD
TQFIKIINTDYFAPILTVNQHSSNKVLEEISSVDTFASLSNWLMRPVPTV
TAAVRRFKERYFEDNYVIVMEMNLVADSSYGSAMQAAQQQLFFKEASDAS
YRAKGNLTPEQQGIVVLVVTDDEEAVRSRLSDLGQDSFGAAGVVAITGPR
GSGTTRILTELQQAWLLGYGDVSIVSPASATGVLGHARMSLLPIVIVDSH
TAHQSTSSQPCLADVGLIQQASCFSPGMLSRLSYDANVPCLGSPPATVTS
SDAARGRMRRLEL*
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