prot_L-digitata_M_contig99576.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99576.2.1
Unique Nameprot_L-digitata_M_contig99576.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length213
Homology
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Match: A0A2G2E2E3_9GAMM (Copper resistance protein CopA n=5 Tax=root TaxID=1 RepID=A0A2G2E2E3_9GAMM)

HSP 1 Score: 423 bits (1088), Expect = 5.030e-144
Identity = 211/213 (99.06%), Postives = 212/213 (99.53%), Query Frame = 0
Query:    1 LTLKLPINPISTFNPTRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213
            +TLKLPI PISTFNPTRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV
Sbjct:    1 MTLKLPIYPISTFNPTRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213          
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Match: A0A2D9KS14_9GAMM (Copper resistance protein CopA n=4 Tax=unclassified Methylophaga TaxID=2629249 RepID=A0A2D9KS14_9GAMM)

HSP 1 Score: 332 bits (851), Expect = 2.070e-108
Identity = 168/207 (81.16%), Postives = 179/207 (86.47%), Query Frame = 0
Query:    7 INPISTFNPTRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213
            + P+  FNP RRRFV GIAAGGVLASFP LL A     + A RGTAPVLTGQ I+L V +S VNFTGVTR+ATTINGSIPAPTLRLREGD+VTIRV NRLKV TSIHWHGIILPYQMDGVPGISF GIEPGETFVYQFKL+QSGTYWYHSHSGFQEMTGMYGALIIEPRE QS   + H+ ADRDYVM LSDWTDEDPM+VFSKLKV
Sbjct:    1 MQPVLNFNPNRRRFVQGIAAGGVLASFPMLLNAESYPNKQATRGTAPVLTGQVIDLTVAESLVNFTGVTRVATTINGSIPAPTLRLREGDDVTIRVTNRLKVPTSIHWHGIILPYQMDGVPGISFGGIEPGETFVYQFKLKQSGTYWYHSHSGFQEMTGMYGALIIEPREMQSDSAKDHISADRDYVMLLSDWTDEDPMSVFSKLKV 207          
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Match: A0A2N8LXR7_9GAMM (Copper resistance protein A n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2N8LXR7_9GAMM)

HSP 1 Score: 322 bits (825), Expect = 2.240e-104
Identity = 158/204 (77.45%), Postives = 178/204 (87.25%), Query Frame = 0
Query:   10 ISTFNPTRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213
            + TF+ TRR FV G+ AGGVLASFP LL+A    +   + GTAPVL+GQ+I+LVV ++PVNFTGV RMATTINGSIPAPTLRLREGDEVTIRV NRLKV TSIHWHGIILP+QMDGVPGISF+GI PGETFVY+FKLQQSGTYWYHSHSGFQEMTGMYGALI+EPREG+   E   + ADRDYV+QLSDWTDEDPM+VF+KLKV
Sbjct:    1 MKTFSATRRHFVQGLVAGGVLASFPALLHAGGRLENQTHTGTAPVLSGQSIDLVVAETPVNFTGVIRMATTINGSIPAPTLRLREGDEVTIRVTNRLKVPTSIHWHGIILPFQMDGVPGISFRGIAPGETFVYRFKLQQSGTYWYHSHSGFQEMTGMYGALIVEPREGRGSREGDRIRADRDYVVQLSDWTDEDPMSVFAKLKV 204          
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Match: A0A5S3T3M9_9GAMM (Copper resistance system multicopper oxidase (Fragment) n=1 Tax=Pseudoalteromonas sp. S4741 TaxID=579563 RepID=A0A5S3T3M9_9GAMM)

HSP 1 Score: 296 bits (757), Expect = 3.020e-99
Identity = 145/206 (70.39%), Postives = 170/206 (82.52%), Query Frame = 0
Query:    8 NPISTFNPTRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213
            NP+   +  RRRFV G+AAGG+LA+FP +L+A  +       GT P L+G+ I+LV+D+SPVNFTGV RMATTINGSIPAPTLRLREGD+VTIRV N+L V +SIHWHGIILPYQMDGVPGISF+GI PGETFVY+FKLQQSGTYWYHSHSGFQEMTGMYGALIIEPRE      +  + AD ++V+QLSDWTD+DPM +F KLKV
Sbjct:    5 NPLHQISTPRRRFVQGLAAGGILAAFPSILHAASSLVAGTITGTVPELSGEIIDLVIDESPVNFTGVVRMATTINGSIPAPTLRLREGDDVTIRVTNKLSVPSSIHWHGIILPYQMDGVPGISFKGIMPGETFVYKFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPRE------KDIISADNEHVIQLSDWTDDDPMDLFRKLKV 204          
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Match: A0A2D5FA50_9GAMM (Copper-containing nitrite reductase n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FA50_9GAMM)

HSP 1 Score: 301 bits (770), Expect = 3.030e-96
Identity = 151/198 (76.26%), Postives = 165/198 (83.33%), Query Frame = 0
Query:   16 TRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213
            +RRRFV G+AAGGVLA  PG L A  N       G APVLTG+ I+L + ++PVNFTGVTRMATTINGSIP PTLRLREGDEVTIRV NRL V+TSIHWHGIILP+QMDGVPGISF GI PGETF Y+FKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREG+S+       ADRDYV+QLSDWTDEDPM VF KLK+
Sbjct:   13 SRRRFVQGLAAGGVLALSPGWLQARANGGGSTQTGLAPVLTGREIDLTIAETPVNFTGVTRMATTINGSIPGPTLRLREGDEVTIRVTNRLPVSTSIHWHGIILPFQMDGVPGISFSGIAPGETFTYRFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGESIR------ADRDYVVQLSDWTDEDPMRVFGKLKI 204          
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Match: A0A1E8CJ79_9GAMM (Copper resistance protein CopA n=6 Tax=root TaxID=1 RepID=A0A1E8CJ79_9GAMM)

HSP 1 Score: 299 bits (765), Expect = 1.610e-95
Identity = 151/201 (75.12%), Postives = 168/201 (83.58%), Query Frame = 0
Query:   14 NPTRRRFVHGIAAGGVLASFPGLLYAMDNS-KQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213
            N  RRRFV G+AAGGVLA+FP +L A   +   L + GTAPVL+G  IELV+ +SPVNFTG  RMATTINGSIPAPTLRLREG+EVTIRV N L VATSIHWHGIILPYQMDGVPGISF GI PGETF Y+F LQQSGTYWYHSHSGFQE+TGMYGALI+EPR+G+++       ADRDYV+QLSDWTDEDPM VFSKLKV
Sbjct:   13 NVNRRRFVQGLAAGGVLAAFPAVLQAASRAGATLTHTGTAPVLSGNQIELVIAESPVNFTGEVRMATTINGSIPAPTLRLREGEEVTIRVTNHLAVATSIHWHGIILPYQMDGVPGISFDGIAPGETFEYRFTLQQSGTYWYHSHSGFQEITGMYGALIVEPRDGETIR------ADRDYVVQLSDWTDEDPMRVFSKLKV 207          
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Match: G7EPR8_9GAMM (Copper resistance protein A n=35 Tax=Proteobacteria TaxID=1224 RepID=G7EPR8_9GAMM)

HSP 1 Score: 296 bits (758), Expect = 2.380e-94
Identity = 147/206 (71.36%), Postives = 171/206 (83.01%), Query Frame = 0
Query:    8 NPISTFNPTRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213
            NP+   +  RRRFV G+AAGGVLA+FP +L+A  +       GTAP L+G+ I+LV+D+SPVNFTGV RMATTINGSIPAPTLRLREGD+VTIRV N+L V +SIHWHGIILPYQMDGVPGISF+GI PGETFVY+FKLQQSGTYWYHSHSGFQEMTGMYGALIIEPRE      +  + AD ++V+QLSDWTD+DPM +F KLKV
Sbjct:    5 NPLHQVSTPRRRFVQGLAAGGVLAAFPSVLHAASSLIAGTSTGTAPELSGEIIDLVIDESPVNFTGVVRMATTINGSIPAPTLRLREGDDVTIRVTNKLSVPSSIHWHGIILPYQMDGVPGISFKGIMPGETFVYKFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPRE------KDIISADNEHVIQLSDWTDDDPMDLFRKLKV 204          
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Match: A0A2K9A815_9GAMM (Copper resistance system multicopper oxidase n=3 Tax=Kangiella TaxID=261963 RepID=A0A2K9A815_9GAMM)

HSP 1 Score: 293 bits (750), Expect = 4.560e-93
Identity = 149/200 (74.50%), Postives = 171/200 (85.50%), Query Frame = 0
Query:   14 NPTRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213
            N +RRRFV G+A GGV+A+ PG L A   S  L  +G+APVL+G+ I+LV+ ++PVNFTGVTRMATTING+IPAPTLRLREGDEV IRVINRL VATSIHWHGI+LPYQMDGVPGISF+GI PGETF+Y+FKL+QSGTYWYHSHSGFQEMTGMYGALIIEPR G+         ADR++V+QLSDWTDEDPM VFSKLKV
Sbjct:   11 NISRRRFVQGLAVGGVMAATPGWLQAGITS--LTSQGSAPVLSGREIDLVIAETPVNFTGVTRMATTINGAIPAPTLRLREGDEVRIRVINRLPVATSIHWHGILLPYQMDGVPGISFKGIAPGETFIYRFKLRQSGTYWYHSHSGFQEMTGMYGALIIEPRLGE------RHSADREHVVQLSDWTDEDPMHVFSKLKV 202          
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Match: A0A7W2U100_9GAMM (Copper resistance system multicopper oxidase n=1 Tax=Colwellia sp. 6M3 TaxID=2759849 RepID=A0A7W2U100_9GAMM)

HSP 1 Score: 292 bits (747), Expect = 9.030e-93
Identity = 143/198 (72.22%), Postives = 167/198 (84.34%), Query Frame = 0
Query:   16 TRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213
            +RRRFV G+AAGGVLA+FP +++A+ +       G AP L+G+ I+LV+ +SPVNFTGV RMATT+NGSIPAPTLRL+EGD+VTIRV N L V +SIHWHG+ILPYQMDGVPGISF+GI PGETFVY+FKLQQSGTYWYHSHSGFQEMTGMYGALIIEPRE      +  + AD+DYV+QLSDWTDEDPM VF KLKV
Sbjct:   13 SRRRFVLGLAAGGVLAAFPSIIHAVPSLTASTITGNAPELSGKVIDLVIGESPVNFTGVVRMATTVNGSIPAPTLRLKEGDDVTIRVTNNLAVPSSIHWHGLILPYQMDGVPGISFKGIMPGETFVYKFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPRE------KDIISADKDYVIQLSDWTDEDPMEVFRKLKV 204          
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Match: A0A2D4S4Z4_9GAMM (Copper resistance protein CopA n=2 Tax=Oceanospirillaceae TaxID=135620 RepID=A0A2D4S4Z4_9GAMM)

HSP 1 Score: 291 bits (745), Expect = 1.710e-92
Identity = 148/198 (74.75%), Postives = 166/198 (83.84%), Query Frame = 0
Query:   16 TRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRGTAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTIRVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWTDEDPMAVFSKLKV 213
            +RRRFV G+AAGGV+AS P +L A + S+Q   +GTAP L+G+ IEL V QSPVNFTG +R+ATTINGSIPAPTLRLREGDEV I+V NRL V TSIHWHGIILPYQMDGVPGISF+GI PGETF YQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPR  + +       ADRD+V+ LSDWTD+DPMAVF KLKV
Sbjct:   15 SRRRFVQGLAAGGVIASTPSMLQANEQSRQ-TIQGTAPELSGKVIELEVAQSPVNFTGSSRLATTINGSIPAPTLRLREGDEVIIKVTNRLSVPTSIHWHGIILPYQMDGVPGISFKGIAPGETFTYQFKLQQSGTYWYHSHSGFQEMTGMYGALIIEPRSKEII------QADRDHVVLLSDWTDDDPMAVFGKLKV 205          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99576.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G2E2E3_9GAMM5.030e-14499.06Copper resistance protein CopA n=5 Tax=root TaxID=... [more]
A0A2D9KS14_9GAMM2.070e-10881.16Copper resistance protein CopA n=4 Tax=unclassifie... [more]
A0A2N8LXR7_9GAMM2.240e-10477.45Copper resistance protein A n=5 Tax=Gammaproteobac... [more]
A0A5S3T3M9_9GAMM3.020e-9970.39Copper resistance system multicopper oxidase (Frag... [more]
A0A2D5FA50_9GAMM3.030e-9676.26Copper-containing nitrite reductase n=1 Tax=Haliea... [more]
A0A1E8CJ79_9GAMM1.610e-9575.12Copper resistance protein CopA n=6 Tax=root TaxID=... [more]
G7EPR8_9GAMM2.380e-9471.36Copper resistance protein A n=35 Tax=Proteobacteri... [more]
A0A2K9A815_9GAMM4.560e-9374.50Copper resistance system multicopper oxidase n=3 T... [more]
A0A7W2U100_9GAMM9.030e-9372.22Copper resistance system multicopper oxidase n=1 T... [more]
A0A2D4S4Z4_9GAMM1.710e-9274.75Copper resistance protein CopA n=2 Tax=Oceanospiri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011707Multicopper oxidase, N-termianlPFAMPF07732Cu-oxidase_3coord: 65..176
e-value: 7.0E-41
score: 139.0
IPR008972CupredoxinGENE3D2.60.40.420coord: 44..212
e-value: 6.1E-49
score: 168.8
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 55..210
NoneNo IPR availablePANTHERPTHR11709:SF249LACCASE-RELATEDcoord: 77..177
IPR045087Multicopper oxidasePANTHERPTHR11709MULTI-COPPER OXIDASEcoord: 77..177
IPR033138Multicopper oxidases, conserved sitePROSITEPS00079MULTICOPPER_OXIDASE1coord: 150..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99576contigL-digitata_M_contig99576:315..953 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99576.2.1mRNA_L-digitata_M_contig99576.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99576 315..953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99576.2.1 ID=prot_L-digitata_M_contig99576.2.1|Name=mRNA_L-digitata_M_contig99576.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=213bp
LTLKLPINPISTFNPTRRRFVHGIAAGGVLASFPGLLYAMDNSKQLAYRG
TAPVLTGQTIELVVDQSPVNFTGVTRMATTINGSIPAPTLRLREGDEVTI
RVINRLKVATSIHWHGIILPYQMDGVPGISFQGIEPGETFVYQFKLQQSG
TYWYHSHSGFQEMTGMYGALIIEPREGQSLVEQSHLDADRDYVMQLSDWT
DEDPMAVFSKLKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011707Cu-oxidase_N
IPR008972Cupredoxin
IPR045087Cu-oxidase_fam
IPR033138Cu_oxidase_CS