prot_L-digitata_M_contig99012.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99012.1.1
Unique Nameprot_L-digitata_M_contig99012.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length34
Homology
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Match: D8LJY8_ECTSI (Threonine dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJY8_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 3.290e-8
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0
Query:    2 SAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV 34
            SAGNHAQGVALSAKKL VKAVIVMPLATPMIKV
Sbjct:  159 SAGNHAQGVALSAKKLNVKAVIVMPLATPMIKV 191          
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Match: A0A7Z9VMV1_9GAMM (L-threonine dehydratase n=3 Tax=root TaxID=1 RepID=A0A7Z9VMV1_9GAMM)

HSP 1 Score: 52.8 bits (125), Expect = 5.510e-7
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 SSAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV 34
            SSAGNHAQGVALSAKKL ++AVIVMPL+TP IKV
Sbjct:   73 SSAGNHAQGVALSAKKLGIEAVIVMPLSTPKIKV 106          
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Match: A0A7U3V231_9GAMM (L-threonine dehydratase n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A7U3V231_9GAMM)

HSP 1 Score: 52.0 bits (123), Expect = 1.030e-6
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 SSAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV 34
            SSAGNHAQGVALSAKKL + A+IVMPL+TP IKV
Sbjct:   73 SSAGNHAQGVALSAKKLGISAIIVMPLSTPRIKV 106          
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Match: A0A1V9ZXD0_9STRA (Threonine dehydratase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXD0_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.400e-6
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0
Query:    2 SAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV 34
            SAGNHAQGVALSAKKL ++A IVMPLATP IKV
Sbjct:  559 SAGNHAQGVALSAKKLGIQATIVMPLATPQIKV 591          
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Match: A0A482Z2Z6_9BACT (L-threonine dehydratase n=5 Tax=root TaxID=1 RepID=A0A482Z2Z6_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 1.410e-6
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 SSAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV 34
            SSAGNHAQGVALSAKKL +++VIVMPL+TP IKV
Sbjct:   73 SSAGNHAQGVALSAKKLGIESVIVMPLSTPKIKV 106          
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Match: A0A7C8DN62_9GAMM (L-threonine dehydratase n=19 Tax=root TaxID=1 RepID=A0A7C8DN62_9GAMM)

HSP 1 Score: 51.6 bits (122), Expect = 1.410e-6
Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    1 SSAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV 34
            SSAGNHAQGVALSAKKL +++VIVMPL+TP IKV
Sbjct:   73 SSAGNHAQGVALSAKKLGIESVIVMPLSTPKIKV 106          
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Match: A0A5D6XPQ1_9STRA (Threonine dehydratase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPQ1_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.920e-6
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0
Query:    2 SAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV 34
            SAGNHAQGVALSA+KL V AVIVMPLATP IKV
Sbjct:   99 SAGNHAQGVALSARKLGVSAVIVMPLATPEIKV 131          
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Match: A0A8K1C536_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C536_PYTOL)

HSP 1 Score: 51.2 bits (121), Expect = 1.920e-6
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0
Query:    2 SAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV 34
            SAGNHAQGVALSAKKL V+A IVMPLATP IK+
Sbjct:   98 SAGNHAQGVALSAKKLGVRATIVMPLATPEIKI 130          
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Match: A0A328RSG8_9BACT (L-threonine dehydratase n=1 Tax=Candidatus Marinamargulisbacteria bacterium SCGC AG-439-L15 TaxID=2184346 RepID=A0A328RSG8_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 1.930e-6
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 SSAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV 34
            SSAGNHAQGVALSAKKL++KA IVMP+ TP IKV
Sbjct:   73 SSAGNHAQGVALSAKKLSLKATIVMPITTPAIKV 106          
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Match: A0A0M4NSS3_9GAMM (L-threonine dehydratase n=1 Tax=Candidatus Thioglobus autotrophicus TaxID=1705394 RepID=A0A0M4NSS3_9GAMM)

HSP 1 Score: 50.8 bits (120), Expect = 2.640e-6
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 SSAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV 34
            SSAGNHAQGVALSAKKL + +VIVMPL+TP IKV
Sbjct:   73 SSAGNHAQGVALSAKKLGIDSVIVMPLSTPKIKV 106          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99012.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJY8_ECTSI3.290e-896.97Threonine dehydratase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A7Z9VMV1_9GAMM5.510e-785.29L-threonine dehydratase n=3 Tax=root TaxID=1 RepID... [more]
A0A7U3V231_9GAMM1.030e-682.35L-threonine dehydratase n=2 Tax=unclassified Gamma... [more]
A0A1V9ZXD0_9STRA1.400e-684.85Threonine dehydratase n=1 Tax=Thraustotheca clavat... [more]
A0A482Z2Z6_9BACT1.410e-682.35L-threonine dehydratase n=5 Tax=root TaxID=1 RepID... [more]
A0A7C8DN62_9GAMM1.410e-682.35L-threonine dehydratase n=19 Tax=root TaxID=1 RepI... [more]
A0A5D6XPQ1_9STRA1.920e-687.88Threonine dehydratase n=1 Tax=Pythium brassicum Ta... [more]
A0A8K1C536_PYTOL1.920e-684.85Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A328RSG8_9BACT1.930e-682.35L-threonine dehydratase n=1 Tax=Candidatus Marinam... [more]
A0A0M4NSS3_9GAMM2.640e-682.35L-threonine dehydratase n=1 Tax=Candidatus Thioglo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeGENE3D3.40.50.1100coord: 1..34
e-value: 1.4E-12
score: 49.3
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 2..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99012contigL-digitata_M_contig99012:740..841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99012.1.1mRNA_L-digitata_M_contig99012.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99012 740..841 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99012.1.1 ID=prot_L-digitata_M_contig99012.1.1|Name=mRNA_L-digitata_M_contig99012.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=34bp
SSAGNHAQGVALSAKKLAVKAVIVMPLATPMIKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent