prot_L-digitata_M_contig1022.14.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig1022.14.1
Unique Nameprot_L-digitata_M_contig1022.14.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length278
Homology
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Match: D8LC92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC92_ECTSI)

HSP 1 Score: 450 bits (1157), Expect = 2.670e-158
Identity = 227/274 (82.85%), Postives = 246/274 (89.78%), Query Frame = 0
Query:    1 MLNCYTPISAPRHDDGTSKRRDRGGKAANGDASAISQPALATTAAARGDGRAPYEMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFSEEGQLKCDFSYAPFATPGGRRESRGGKKDDERELSTLLRQTLESSVQVHRLTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVGYSGTQMVLDPTHAEEKSGAGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALELCTDGCGCVHKMMVAKLKASAASR 274
            M NCY P++AP  +D  SKRRDR GKA NG  +A  +P+LA+T   R DGRAPY+MRQVYMDVG+VAHATGSAYVEFNHTKVICAVYGPHAQTG DS+FSEEGQL+CDFSYAPFA PGGRRE+RGGKKDDERELSTLLRQTLESS+QVHRLTKSVV +HVMVLQADGGELAVATTCASMALADAGIELYDLVT+CSVGY GTQMVLDPT  EEKSGAGVM IALMPGSQ VTQWWQEGRF+G++VAEALELCTDGCGCVHKMM AKLKAS   +
Sbjct:    1 MNNCYKPLAAPAQNDAKSKRRDRDGKAPNG--TATKEPSLASTT--REDGRAPYDMRQVYMDVGVVAHATGSAYVEFNHTKVICAVYGPHAQTGGDSAFSEEGQLQCDFSYAPFAMPGGRRETRGGKKDDERELSTLLRQTLESSIQVHRLTKSVVGVHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHKMMEAKLKASTTKK 270          
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Match: A0A835ZHR0_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHR0_9STRA)

HSP 1 Score: 241 bits (614), Expect = 5.370e-76
Identity = 136/273 (49.82%), Postives = 178/273 (65.20%), Query Frame = 0
Query:    1 MLNCYTPISAPRHDDGTSKRRDRGGKAANGDASAISQPALATTAAAR----GDGRAPYEMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFSEEGQLKCDFSYAPFATPGGRRESRGGKKDDERELSTLLRQTLESSVQVHRLTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVGYSGTQMVLDPTHAEEKSGAGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALELCTDGCGCVHKMMVAKLKA 269
            MLNCYTP  AP                    A A+ +   A ++  R    GDGR   E+R+VY+D+G+V+ A+GSAY+E +HTKVICAVYGPHAQ+  D++FSEEGQLKCD   APFA P  +R    G+ D+ERELS  L+Q LE+SV++  LTK+ VD++V VL ADGG L  A TCAS+ALA+A IEL+DLV +C+   +  Q++LDPT  EE +  G + +A+MP S+ VTQW Q GR    + A A+ELC DGC  V  MM A+L A
Sbjct:    1 MLNCYTPRRAPPA------------------AVAVEEQTSADSSRKRPEHRGDGRKASELRRVYLDLGVVSQASGSAYLELDHTKVICAVYGPHAQS-MDTAFSEEGQLKCDLRMAPFAQP--KRSEVRGQTDEERELSATLQQALEASVRLDLLTKTAVDVYVTVLAADGGVLGAAITCASLALANASIELFDLVAACTAACADGQVLLDPTAQEEAAAGGSVLVAVMPSSREVTQWRQRGRLPSAQAAAAVELCMDGCAGVATMMRARLLA 252          
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Match: A0A7S2UZ52_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ52_9STRA)

HSP 1 Score: 229 bits (584), Expect = 5.520e-71
Identity = 135/297 (45.45%), Postives = 180/297 (60.61%), Query Frame = 0
Query:    1 MLNCYTPISAPRHDDGTSKRRDRGGKAANGDASAISQPALATTAAARGDGRAPYEMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFSEEGQLKCDFSYAPFATPG---------GRRESRGGKKDD-ERELSTLLRQTLESSVQVHRLTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVG-YSGTQMVLDPTHAE---------EKSG----------AGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALELCTDGCGCVHKMMVAKL 267
            M+NCY+P      D+     ++R           I +P+       R DGR   EMR+V++DVGI++ A+GSAY+E N TKVIC + GPHA +  D +FSE+GQL+ D  YAPFA  G          RR+    ++ D ER+ S L+RQ LE+S+Q+H L KS++D+++ VLQADGGEL  A TCAS+AL+DAGIEL+DLV  CSVG   G++++LDPT  E           SG          AGVM +   P SQ VTQWWQEG+F+ E +A  L LC DGC  +HK+M  KL
Sbjct:    1 MINCYSPAVVLETDE-----QER----------TIIKPS-------RADGRDDKEMRKVFIDVGILSCASGSAYIELNMTKVICTISGPHAISRADDTFSEQGQLRVDLRYAPFARVGQSQYETNDRDRRDHHPARQTDGERDASALIRQALEASIQMHLLPKSLIDVYIWVLQADGGELGAAVTCASLALSDAGIELFDLVVGCSVGCLGGSRVLLDPTEVEISQQRAPEDSSSGGARGGKQGAKAGVMTVTFTPASQEVTQWWQEGQFDQESMARGLALCIDGCLVMHKIMKEKL 275          
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Match: K3XAM5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAM5_GLOUD)

HSP 1 Score: 209 bits (532), Expect = 1.890e-63
Identity = 119/265 (44.91%), Postives = 162/265 (61.13%), Query Frame = 0
Query:    1 MLNCYTPISA-PRHDDGTSKRRDRGGKAANGDASAISQPALATTAAARGDGRAPYEMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFSEEGQLKCDFSYAPFATPGGRRESRGGKKDDERELSTLLRQTLESSVQVHRLTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVGYSGTQMVLDPTHAEEKSGAGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALELCTDGCGCVHKMMV 264
            M NCY P++A P    G +K +D    AA     A+ + A+              E+RQ +M +G+V+ A+GSAYVEFN T+V+C+VYGP   T     FS EGQL CDF YAPFA P GRRE   G+  DE E+S++L Q L  +V + +L K VV I+V+VL++DGGELA A  CAS+AL DA +E+YD+VT+   G   +++VLDP H EE  G G + +A MP    VT   Q G+    E+ EA++LCTD C  V K ++
Sbjct:    1 MQNCYFPVNAKPARAHGAAKDKD----AAVDPIKALLEKAVRLDELRSSSD----ELRQAFMKLGVVSGASGSAYVEFNRTRVVCSVYGPRNDTRSRREFSNEGQLVCDFKYAPFADPVGRRER--GQDPDELEMSSILTQALSPAVMLSKLPKCVVSIYVVVLESDGGELAAAINCASLALIDAAVEMYDIVTASGAGIVNSKVVLDPCHKEEVYGDGKLLLAFMPTMGKVTYMLQAGKIEHSELQEAVDLCTDACNGVMKTLM 255          
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Match: A0A8K1CTD4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTD4_PYTOL)

HSP 1 Score: 201 bits (511), Expect = 2.160e-60
Identity = 116/265 (43.77%), Postives = 157/265 (59.25%), Query Frame = 0
Query:    1 MLNCYTP-ISAPRHDDGTSKRRDRGGKAANGDASAISQPALATTAAARGDGRAPYEMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFSEEGQLKCDFSYAPFATPGGRRESRGGKKDDERELSTLLRQTLESSVQVHRLTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVGYSGTQMVLDPTHAEEKSGAGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALELCTDGCGCVHKMMV 264
            M NCY P I+ PR       ++D        D   I +        A  D     EMR  +M +G+V+ A GSAYVEFN T+V+C+VYGP   T     FS+EGQL CDF YAPFA   GRRE   G+ DDE E+S++L Q L  +V + +L K VV I+V+VL++DG +LA A  CAS+AL DA +E+YD+VT+ S G   +Q+VLDP H EE  G G + +A MP    +T   Q G+    ++ EA++LCTD C  V K ++
Sbjct:    1 MQNCYFPAIAKPRGGGDAQSKQD--------DQVMIDKTLRLDRIRASAD-----EMRPAFMRLGVVSGAAGSAYVEFNRTRVVCSVYGPRNDTRSRREFSQEGQLVCDFKYAPFADSTGRRER--GQDDDELEMSSILTQALSPAVMLAKLPKCVVSIYVVVLESDGSDLAAAINCASLALIDAAVEMYDIVTAASAGIVDSQIVLDPCHEEEVHGEGNVVMAYMPSVGQLTHMVQSGKIQHGQLQEAVDLCTDACSGVMKHLL 250          
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Match: A0A2D4C421_PYTIN (Exosome complex exonuclease MTR3-like protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C421_PYTIN)

HSP 1 Score: 197 bits (500), Expect = 1.200e-58
Identity = 117/265 (44.15%), Postives = 159/265 (60.00%), Query Frame = 0
Query:    1 MLNCYTPISAPRHDDGTSKRRDRGGKAANGDASAISQPALAT-TAAARGDGRAPYEMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFSEEGQLKCDFSYAPFATPGGRRESRGGKKDDERELSTLLRQTLESSVQVHRLTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVGYSGTQMVLDPTHAEEKSGAGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALELCTDGCGCVHKMMV 264
            M NCY P +A   +  +S            DA++ +Q AL   T       R+  EMR  +M +G+V+ A GSAYVEF+ T+V+C+VYGP   T     FS+EGQL CDF YAPFA   GRRE   G+ DDE ELS++L Q L  +V + +L K VV I V+VL++DGGELA A  CAS+AL DA +E+YD+VT+ S     +++VLDP  AEE  G G + +A MP    +T   Q GR    ++ EA++LCT  C  + K M+
Sbjct:    1 MQNCYFPXAAVAPERSSST-----------DATSDAQRALIDKTLRLDRVRRSADEMRPTFMKLGVVSGAAGSAYVEFHRTRVVCSVYGPRNDTRSRREFSQEGQLVCDFKYAPFADASGRRER--GQDDDELELSSILTQALSPAVMLSKLPKCVVSIFVVVLESDGGELAAAINCASLALVDAAVEMYDVVTAASAAVVDSRVVLDPCAAEETRGDGKVVLAYMPTLGRLTHTLQSGRLQHAQLQEAVDLCTXACTGLMKNML 252          
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Match: D0NP71_PHYIT (Exosome complex exonuclease MTR3-like protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NP71_PHYIT)

HSP 1 Score: 191 bits (484), Expect = 1.960e-56
Identity = 108/274 (39.42%), Postives = 155/274 (56.57%), Query Frame = 0
Query:    1 MLNCYTPI------SAPRHDDGTSKRRDRGGKAANGDASAISQPALATTAAARGDGRAPYEMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFSEEGQLKCDFSYAPFATPGGRRESRGGKKDDERELSTLLRQTLESSVQVHRLTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVGYSGTQMVLDPTHAEEKSGAGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALELCTDGC-GCVHKMMVAKL 267
            M NCY P+      +AP+ DD   +R D+   +++                         EMR+ +M +G V+ A GSAYVE   T+V+CAVYGP   T     FS++GQL CD  YAPFA    RRE   G+  DE ELS ++ + L  +V +H+L K ++ + V +L+ DGG LA A  CAS+ALADA +E+YD+VT+ S G     +VLDP+  EE+ G G +A+A MP    VT   Q G+ +  ++ EA++LCTD C G +  ++ A L
Sbjct:    1 MQNCYYPLPVQPQLAAPKDDDAPMERLDKSRTSSD-------------------------EMRRPFMQLGAVSGAAGSAYVELGRTRVLCAVYGPRTDTRARREFSKDGQLVCDVKYAPFADKLTRRER--GQDPDEMELSAIVEEALAPAVMLHKLPKCIISVFVTILEDDGGVLAAALNCASLALADAAVEMYDVVTASSAGIVNGSVVLDPSREEEQRGDGKLALAYMPSMGRVTYMLQAGKIHHTQLQEAVDLCTDACTGVIRSLLTASL 247          
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Match: L8HCU8_ACACA (3' exoribonuclease family, domain 1 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCU8_ACACA)

HSP 1 Score: 190 bits (483), Expect = 5.320e-56
Identity = 104/226 (46.02%), Postives = 147/226 (65.04%), Query Frame = 0
Query:   49 DGRAPYEMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFSEEGQLKCDFSYAPFATPGGRRESRGGKKDDERELSTLLRQTLESSVQVHRLTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVGYSGTQMVLDPTHAEEKSGAGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALELCTDGCGCVHKMMVAKLKASAASR 274
            DGR+P E R V++  G+++ A GSAY+E N TKVIC VYGP  QT + + +SE+G+L C F  A FA  G RR+    K  +E+ELS L+ Q LE S+++    KS +D+ V+VL+  GG +  A T AS+ALADAGIE+YDLV SCSVG   + ++LDP+ AEEK+    + +A+MP +  +TQ  Q G     +  EA+ELC DGC  +++MM   L  +AA +
Sbjct:   41 DGRSPDEFRPVFLKTGVISQAAGSAYIEMNQTKVICGVYGPR-QTPK-TVYSEKGKLNCFFKLATFAENGERRKYVSDK--EEKELSMLMVQALEVSLRLETFPKSELDVFVLVLEESGGMVGAAITAASLALADAGIEMYDLVASCSVGVVDSHILLDPSIAEEKAAQSNLMVAIMPSANEITQMLQTGEIEHTKAPEAIELCLDGCSKIYQMMRQNLLETAAQK 262          
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Match: H3GV34_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GV34_PHYRM)

HSP 1 Score: 186 bits (471), Expect = 1.770e-54
Identity = 99/214 (46.26%), Postives = 135/214 (63.08%), Query Frame = 0
Query:   55 EMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFSEEGQLKCDFSYAPFATPGGRRESRGGKKDDERELSTLLRQTLESSVQVHRLTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVGYSGTQMVLDPTHAEEKSGAGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALELCTDGC-GCVHKMMVAKL 267
            EMR+ +M +G V+ A GSAYVE   T+V+CAVYGP   T     FS++GQL CD  YAPFA    RRE   G+  DE ELS ++ + L  +V +H+L K V+ + V VL+ DGG  A A  CAS+ALADA +E+YD+VT+ S G   + +VLDP+  EE+ G G MA+A MP    VT   Q G+ +  ++ EA++LCTD C G    ++ A L
Sbjct:   36 EMRRSFMQLGAVSGAAGSAYVELGRTRVVCAVYGPRTDTRARREFSKDGQLVCDVKYAPFADKWTRRER--GQDPDEMELSAIVEEALAPAVMLHKLPKCVLSLFVTVLEDDGGVFAAAINCASLALADAAVEMYDVVTAASAGIVNSTVVLDPSREEEQRGDGKMALAYMPSMGRVTYMLQAGKVHHTQLQEAVDLCTDACTGVTRTLLTASL 247          
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Match: A0A3F2RG10_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RG10_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.990e-53
Identity = 108/274 (39.42%), Postives = 148/274 (54.01%), Query Frame = 0
Query:    1 MLNCYTPISA------PRHDDGTSKRRDRGGKAANGDASAISQPALATTAAARGDGRAPYEMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFSEEGQLKCDFSYAPFATPGGRRESRGGKKDDERELSTLLRQTLESSVQVHRLTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVGYSGTQMVLDPTHAEEKSGAGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALELCTDGC-GCVHKMMVAKL 267
            M NCY P+        P  DD    R D    +++                         EMR+ +M +  V+ A GSAYVE   T+V+CAVYGP A T     FS +GQL CD  +APFA    RRE   G+  DE ELS ++ + L  +V +H+L K VV + V VL+ DGG  A A  CAS+ALADA +E+YD+VT+ S G   + +VLDP+  EE+ G G +A+A MP    VT   Q G+ +  ++ EA++LCTD C G    ++ A L
Sbjct:    1 MQNCYYPLPVKPQLPVPADDDAVMNRLDASRSSSD-------------------------EMRRPFMQIRAVSGAAGSAYVELGRTRVVCAVYGPRADTRPRREFSNDGQLVCDVKFAPFADALTRRER--GQDPDEMELSAIVEEALAPAVMLHKLPKCVVSVFVTVLENDGGVFAAAINCASLALADAAVEMYDVVTAASAGIVNSTVVLDPSREEEQRGDGKLALAYMPSMGQVTYMLQAGQIHHTQLQEAVDLCTDACTGVTRSLLTASL 247          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig1022.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC92_ECTSI2.670e-15882.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZHR0_9STRA5.370e-7649.82Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A7S2UZ52_9STRA5.520e-7145.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3XAM5_GLOUD1.890e-6344.91Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CTD4_PYTOL2.160e-6043.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C421_PYTIN1.200e-5844.15Exosome complex exonuclease MTR3-like protein n=2 ... [more]
D0NP71_PHYIT1.960e-5639.42Exosome complex exonuclease MTR3-like protein n=16... [more]
L8HCU8_ACACA5.320e-5646.023' exoribonuclease family, domain 1 domain contain... [more]
H3GV34_PHYRM1.770e-5446.26Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A3F2RG10_9STRA1.990e-5339.42Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 190..253
e-value: 9.2E-7
score: 28.8
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 33..276
e-value: 2.7E-69
score: 235.3
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 55..187
e-value: 2.4E-32
score: 112.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..46
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 40..270
NoneNo IPR availablePANTHERPTHR11953:SF2EXOSOME COMPLEX COMPONENT MTR3coord: 40..270
NoneNo IPR availableCDDcd11371RNase_PH_MTR3coord: 56..268
e-value: 2.2431E-100
score: 290.236
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 188..272
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 45..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig1022contigL-digitata_M_contig1022:20762..23614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig1022.14.1mRNA_L-digitata_M_contig1022.14.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig1022 20762..23614 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig1022.14.1 ID=prot_L-digitata_M_contig1022.14.1|Name=mRNA_L-digitata_M_contig1022.14.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=278bp
MLNCYTPISAPRHDDGTSKRRDRGGKAANGDASAISQPALATTAAARGDG
RAPYEMRQVYMDVGIVAHATGSAYVEFNHTKVICAVYGPHAQTGRDSSFS
EEGQLKCDFSYAPFATPGGRRESRGGKKDDERELSTLLRQTLESSVQVHR
LTKSVVDIHVMVLQADGGELAVATTCASMALADAGIELYDLVTSCSVGYS
GTQMVLDPTHAEEKSGAGVMAIALMPGSQLVTQWWQEGRFNGEEVAEALE
LCTDGCGCVHKMMVAKLKASAASRKDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015847ExoRNase_PH_dom2
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR036345ExoRNase_PH_dom2_sf
IPR020568Ribosomal_S5_D2-typ_fold