prot_L-digitata_M_contig101851.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-digitata_M_contig101851.1.1
Unique Name	prot_L-digitata_M_contig101851.1.1
Type	polypeptide
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length	110

Homology

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BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Match: A0A2D7FLS0_9PROT (Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FLS0_9PROT)

HSP 1 Score: 177 bits (450), Expect = 4.960e-52
Identity = 77/109 (70.64%), Postives = 96/109 (88.07%), Query Frame = 0

Query:    1 VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPVLAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLTDDAELIAFR 109
            VAGDF+Y+VT + EVICLTRRGG VRW+ QL  FED ED TGPILW+GPV+AG+RLLV+NN++++WSLSPYTG +LG +++  PVLIPP++A ETLYVLTD+AELIAFR
Sbjct:  318 VAGDFIYVVTHNAEVICLTRRGGHVRWMAQLAGFEDAEDQTGPILWSGPVVAGNRLLVANNIDQVWSLSPYTGNILGRIDISSPVLIPPIVASETLYVLTDEAELIAFR 426

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BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Match: A0A2D8PUE2_9PROT (Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PUE2_9PROT)

HSP 1 Score: 177 bits (448), Expect = 1.030e-51
Identity = 79/109 (72.48%), Postives = 96/109 (88.07%), Query Frame = 0

Query:    1 VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPVLAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLTDDAELIAFR 109
            VAGDF+Y++TR+ EVICLTRRGGRVRWI QLPR+ED ED   PILW GPVLAGDRLL+  + EE+WSLSPY+GKVLG LE+PGP+L+PPV+A ETLY+LT++A+LIA R
Sbjct:  320 VAGDFIYVLTRNAEVICLTRRGGRVRWISQLPRYEDEEDQEDPILWAGPVLAGDRLLIGGSHEEMWSLSPYSGKVLGRLEMPGPILLPPVVARETLYILTEEADLIALR 428

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BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Match: A0A2S6Q7D4_9PROT (Outer membrane protein assembly factor BamB n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q7D4_9PROT)

HSP 1 Score: 174 bits (441), Expect = 1.550e-50
Identity = 77/109 (70.64%), Postives = 97/109 (88.99%), Query Frame = 0

Query:    1 VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPVLAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLTDDAELIAFR 109
            VAGDF+Y++TRD E++CLTRRGGRVRWI QLPRFED ++   PILW+GPVLAGDRLL+ N+ EEIWSLSPY G+VLG +++ GPVLIPP++A ET+YVLTD+A+LIA+R
Sbjct:  335 VAGDFIYVLTRDAELVCLTRRGGRVRWISQLPRFEDEKEQEDPILWSGPVLAGDRLLIGNSREEIWSLSPYHGEVLGRIDILGPVLIPPIVARETVYVLTDEADLIAYR 443

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BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Match: A0A520NP98_9PROT (Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NP98_9PROT)

HSP 1 Score: 173 bits (438), Expect = 3.140e-50
Identity = 77/109 (70.64%), Postives = 95/109 (87.16%), Query Frame = 0

Query:    1 VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPVLAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLTDDAELIAFR 109
            VAGDF+Y++TR+ E++CLTRRGGRVRWI QLPRFED ED   P+LW+GPVLAGDRLLV +  +EIWS+SPYTGK+LG +EV GPVLI PV+A ET+YVLTD+A+L A+R
Sbjct:  320 VAGDFIYVMTRNAELVCLTRRGGRVRWIAQLPRFEDEEDQEDPVLWSGPVLAGDRLLVGSTQKEIWSVSPYTGKILGRIEVSGPVLISPVVARETVYVLTDEADLAAYR 428

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BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Match: A0A6N7FG69_9PROT (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FG69_9PROT)

HSP 1 Score: 154 bits (388), Expect = 9.140e-43
Identity = 68/109 (62.39%), Postives = 86/109 (78.90%), Query Frame = 0

Query:    1 VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPVLAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLTDDAELIAFR 109
            V GDFVY++   GE++CL RR G +RW+ Q+  FED +D   PI+WTGPVLAGDRLLV ++  E+WS+SPYTGK+LG +E PGPV IPP +A +T+YVLTD AELIAFR
Sbjct:  328 VVGDFVYLMNNAGELVCLARRNGGIRWVRQMQVFEDEKDREDPIVWTGPVLAGDRLLVGSSHGELWSVSPYTGKLLGRIETPGPVFIPPAVANDTVYVLTDKAELIAFR 436

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BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Match: A0A2E6GL96_9PROT (Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GL96_9PROT)

HSP 1 Score: 152 bits (385), Expect = 2.570e-42
Identity = 66/109 (60.55%), Postives = 89/109 (81.65%), Query Frame = 0

Query:    1 VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPVLAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLTDDAELIAFR 109
            VAG+FVY+++  GE++CL+RR G VRW+ QL R+ED +D   PI WTGPVLAGDRLL+  + EE+WS+SPYTGK+LG +++ GPV IPPVIA +T+++L+DDA LIA R
Sbjct:  329 VAGEFVYVLSAFGELLCLSRRTGGVRWVTQLQRYEDEKDQEDPIFWTGPVLAGDRLLIGGSHEEVWSISPYTGKILGRVKLSGPVFIPPVIANDTVFILSDDARLIALR 437

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BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Match: A0A2E5BS34_9HYPH (Pyrrolo-quinoline quinone n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BS34_9HYPH)

HSP 1 Score: 148 bits (374), Expect = 1.200e-40
Identity = 66/109 (60.55%), Postives = 89/109 (81.65%), Query Frame = 0

Query:    1 VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPVLAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLTDDAELIAFR 109
            VAG F+++VT D EV+ L++R GR+RWI QLPRFED ED  GPI W+GPVLAGDRL++++++ E  SLSPYTG+VLG +E+P  V +PP++A ETLYVLTD A+L+A +
Sbjct:  336 VAGGFIFLVTTDAEVVALSQRDGRIRWIQQLPRFEDEEDRDGPITWSGPVLAGDRLILASSLGEAVSLSPYTGEVLGRVELPDGVYLPPIVANETLYVLTDSADLVALK 444

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BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Match: A0A2E7QV46_9PROT (Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QV46_9PROT)

HSP 1 Score: 146 bits (368), Expect = 8.060e-40
Identity = 60/109 (55.05%), Postives = 87/109 (79.82%), Query Frame = 0

Query:    1 VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPVLAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLTDDAELIAFR 109
            VAGDF+Y+++  GE++CL+RR G VRW+ QL R+ED +   GP+ WTGPVLAGDRLL+  + +E+WS+SPY G +LG ++V GPV IPP++A +T+Y+L+D+A L+A R
Sbjct:  329 VAGDFIYVLSGLGELLCLSRRTGGVRWVSQLQRYEDEKTQEGPVYWTGPVLAGDRLLIGGSHKEVWSISPYNGSILGRIKVSGPVFIPPIVANDTIYILSDNARLLALR 437

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BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Match: A0A2E7DI48_9PROT (Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7DI48_9PROT)

HSP 1 Score: 143 bits (361), Expect = 4.550e-39
Identity = 64/109 (58.72%), Postives = 88/109 (80.73%), Query Frame = 0

Query:    1 VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPVLAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLTDDAELIAFR 109
            VAG F+YIV+ +GEVICL RR GR+RW+ +LPRFE  ED  G I + GP+LAGDRLLV++++ E+ ++SPY+GK LG ++V GP+ +PP+IAG T+Y+LTD A LIA+R
Sbjct:  293 VAGKFIYIVSTNGEVICLIRRDGRIRWLTRLPRFESPEDREGLISYAGPLLAGDRLLVASSLGELHAISPYSGKPLGVVDVGGPIFVPPIIAGRTIYLLTDGALLIAYR 401

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BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Match: A0A2S6UGS4_9PROT (Outer membrane protein assembly factor BamB n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin1 TaxID=2013074 RepID=A0A2S6UGS4_9PROT)

HSP 1 Score: 142 bits (358), Expect = 2.460e-38
Identity = 57/109 (52.29%), Postives = 86/109 (78.90%), Query Frame = 0

Query:    1 VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPVLAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLTDDAELIAFR 109
            +AG+F+Y++T + +++CLTRRGGR+RW++ LPRFED +D   PI W+GPVLAGDRLL+S +  E WS+SPY+G++LG  ++ G V +PPV+A  T++ L +D +L+A R
Sbjct:  332 IAGEFIYVLTNESQLVCLTRRGGRIRWVLDLPRFEDEDDKDAPIKWSGPVLAGDRLLISGSHGEAWSISPYSGEILGREDLSGSVYLPPVVADGTVFFLIEDGDLVAMR 440

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig101851.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2D7FLS0_9PROT	4.960e-52	70.64	Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillacea...	[more]
A0A2D8PUE2_9PROT	1.030e-51	72.48	Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillacea...	[more]
A0A2S6Q7D4_9PROT	1.550e-50	70.64	Outer membrane protein assembly factor BamB n=1 Ta...	[more]
A0A520NP98_9PROT	3.140e-50	70.64	Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillacea...	[more]
A0A6N7FG69_9PROT	9.140e-43	62.39	PQQ-binding-like beta-propeller repeat protein n=1...	[more]
A0A2E6GL96_9PROT	2.570e-42	60.55	Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillacea...	[more]
A0A2E5BS34_9HYPH	1.200e-40	60.55	Pyrrolo-quinoline quinone n=1 Tax=Rhodobiaceae bac...	[more]
A0A2E7QV46_9PROT	8.060e-40	55.05	Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillacea...	[more]
A0A2E7DI48_9PROT	4.550e-39	58.72	Pyrrolo-quinoline quinone n=1 Tax=Rhodospirillacea...	[more]
A0A2S6UGS4_9PROT	2.460e-38	52.29	Outer membrane protein assembly factor BamB n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..109 e-value: 2.0E-17 score: 65.4
IPR002372	Pyrrolo-quinoline quinone repeat	PFAM	PF13360	PQQ_2	coord: 48..108 e-value: 1.2E-5 score: 25.0
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 1..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig101851	contig	L-digitata_M_contig101851:2..331 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig101851.1.1	mRNA_L-digitata_M_contig101851.1.1	Laminaria digitata LdigPH10_18mv male	mRNA	L-digitata_M_contig101851 2..331 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-digitata_M_contig101851.1.1 ID=prot_L-digitata_M_contig101851.1.1|Name=mRNA_L-digitata_M_contig101851.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=110bp
VAGDFVYIVTRDGEVICLTRRGGRVRWIVQLPRFEDLEDLTGPILWTGPV
LAGDRLLVSNNVEEIWSLSPYTGKVLGFLEVPGPVLIPPVIAGETLYVLT
DDAELIAFR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR002372	PQQ_repeat
IPR011047	Quinoprotein_ADH-like_supfam