prot_L-digitata_M_contig10134.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10134.1.1
Unique Nameprot_L-digitata_M_contig10134.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length226
Homology
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Match: D8LC56_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC56_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 3.780e-86
Identity = 136/221 (61.54%), Postives = 168/221 (76.02%), Query Frame = 0
Query:    1 MVLYTKKAMLESNSMDGAVRTTDQMESAISAAYEGANNALDSSGVGFTLRVVYMAQVDYTETSEISDAVYALQGGDHEELLDVHALRDEYGADLVQLVGFYLNTCGIGFTMQSPTSAFDGYGYSVVHANCLSNYSHIHEIGHNMGANHNKEN---SHSDHAYAYAWRYCDGDIPYRTLMAYENGCSAAPRMNIFSTPDKSYAGQPQGTDTANNARVLNEAM 218
            +VLYT+KAMLES+S DGA R+  QMES I+ AY+GANNAL +SGV F++R+V+M Q  + E+  I D V A+Q  +      VH LRDEYGADLVQL+G+YLNTCG+GFTM SP+S F  YGYSVVH NCLSN+SHIHE+GHN GANHNKEN   S    AY YA+R C+    +RT+MAY +GC + PR+N+FS PD +YA Q QGT+ A+NARVLNEAM
Sbjct:  222 LVLYTEKAMLESDSGDGAGRSIAQMESDIATAYQGANNALSASGVNFSVRIVHMEQAPFDESDSIVDDVRAIQKNE-----GVHKLRDEYGADLVQLIGYYLNTCGVGFTMGSPSSGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENAGGSDGVDAYNYAYRNCEVGTKFRTIMAYSSGCPSTPRVNVFSNPDLTYANQRQGTENADNARVLNEAM 437          
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Match: A0A6H5JDN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN0_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 3.270e-85
Identity = 140/239 (58.58%), Postives = 171/239 (71.55%), Query Frame = 0
Query:    1 MVLYTKKAMLESNSMDGAVRTTDQMESAISAAYEGANNALDSSGVGFTLRVVYMAQVDYTETSEISDAVYALQGGDHEELLDVHALRDEYGADLVQLVGFYLNTCGIG----------------FTMQSPTSAFDGYGYSVVHANCLSNYSHIHEIGHNMGANHNKEN---SHSDHAYAYAWRYCDGDIPYRTLMAYENGCSAAPRMNIFSTPDKSYAGQPQGTDTANNARVLNEAMVS 220
            +VLYT+KAMLESNS+DGA R+  QMES I+ AY+GANNAL +SGV F++R+V+M Q  + E+  I D V ALQ  +      VH LRDEYGADLVQL+G+YLNTCG+G                FTM +P+S F  YGYSVVH NCLSN+SHIHE+GHN GANHNKEN   S    AY YA+R CD    +RT+MAY +GC + PR+N+FS PD +YA Q QGT+ ANNARVLNEAMV+
Sbjct:  198 LVLYTEKAMLESNSVDGAGRSIAQMESDIATAYQGANNALSASGVNFSVRIVHMEQAPFDESDSIVDDVRALQKNE-----GVHKLRDEYGADLVQLIGYYLNTCGVGSKVSSFFALYPARTHRFTMGTPSSGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENVGGSGGVDAYNYAYRNCDVGTKFRTIMAYSSGCPSTPRVNVFSNPDLTYANQRQGTENANNARVLNEAMVT 431          
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Match: D8LCC0_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC0_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 8.130e-40
Identity = 66/110 (60.00%), Postives = 88/110 (80.00%), Query Frame = 0
Query:  109 FTMQSPTSAFDGYGYSVVHANCLSNYSHIHEIGHNMGANHNKENSHSDHAYAYAWRYCDGDIPYRTLMAYENGCSAAPRMNIFSTPDKSYAGQPQGTDTANNARVLNEAM 218
            + M +P +AF+G+GYS+VH +CL N SHIHEIGHNMGANHN+E++ S+H YA+A RYC GD PYRT+MAYE GC  APR+ +FST DK+YA +  GT + +NARV+ E++
Sbjct:  302 YVMATPRAAFEGFGYSIVHTHCLDNLSHIHEIGHNMGANHNREDTSSEHDYAHAQRYCTGDTPYRTIMAYETGCLQAPRVAMFSTQDKTYASKSLGTTSTDNARVIEESL 411          
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Match: A0A836CMI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI7_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.280e-37
Identity = 85/208 (40.87%), Postives = 125/208 (60.10%), Query Frame = 0
Query:   21 TTDQMESAISAAYEGANNALDSSGVGFTLRVVYMAQVDYTETSEISDAVYALQGGDHEELLDVHALRDEYGADLVQLVGFYLNTCGIGFTMQSPTSAFDGYGYSVVHANCLSNYSHIHEIGHNMGANHNKENSHSDHAYAYA--WRYCDGDIP----YRTLMAYENGCSAAPRMNIFSTPDKSYAGQPQGTDTANNARVLNEAMVSCA 222
            T D + S I+A    AN AL +SGV F ++   +  VDY +T+ + +A+ AL  G    +  ++  RD+Y ADLVQ+V      CG G  + S +S+F  YG+SVV+++C+ +YSHIHEIGHNMG  HN ENS     ++Y   +RYC+  +     YR++M+Y   C+ A R+  FS+PD  Y G+  G DTA+N RVL +   + A
Sbjct:  260 TDDTITSKIAAGVATANQALANSGVSFRVKAAAIMHVDYDDTTHM-EALAALNTG---SIAGINTARDKYSADLVQMVIESSEYCGYGNLLYSASSSFAPYGFSVVYSDCIVSYSHIHEIGHNMGCQHNAENSGDATMWSYGVGYRYCNDGVSKSPYYRSVMSY--ACTGATRVPYFSSPDVEYQGRTTGLDTADNVRVLEQTHYTVA 461          
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.260e-36
Identity = 81/203 (39.90%), Postives = 120/203 (59.11%), Query Frame = 0
Query:   37 NNALDSSGV-GFTLRVVYMAQVDYTETSEI-SDAVYALQGGDHEELLDVHA-------LRDEYGADLVQLVGFYLNTCGIGFTMQSPTSAFDGYGYSVVHANCLSNYSHIHEIGHNMGANHNKENSHSDHAYAYAWRYCDGDIPYRTLMAY-ENGCSA---------APRMNIFSTPDKSYAGQPQGTDTANNARVLNEAMVS 220
            N A+ +SG+ G   R+V +A++ Y++ + I SD +      D +  LD  A       LR++Y  DLVQLVG++  TCG+G+      +    +G+S+V +NC  N+SH HEI HNMG  H+K NS + HAY + WRYC+G  PYRT+M+Y  NGC            PR+N FS P+ +Y  +  GT  A+NAR + ++MV+
Sbjct:  207 NQAITNSGIAGLEYRLVQVAELPYSQMAYIPSDDI------DLKPELDALAANSNVTDLRNQYQGDLVQLVGYFPGTCGLGYIFNGDAA----FGFSLVDSNCFDNFSHTHEIAHNMGCYHDKNNSDTQHAYRHGWRYCEGADPYRTIMSYYHNGCGGDPTSEDDPIVPRVNYFSNPNVTYLNKSTGTAAADNARCIEDSMVA 399          
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Match: A0A0F2IZ28_9BACT (Peptidyl-Asp metalloendopeptidase n=1 Tax=Candidatus Magnetoovum chiemensis TaxID=1609970 RepID=A0A0F2IZ28_9BACT)

HSP 1 Score: 140 bits (354), Expect = 1.340e-35
Identity = 88/233 (37.77%), Postives = 134/233 (57.51%), Query Frame = 0
Query:    1 MVLYTKKAMLESNSMDGAVRTTDQMESAISAAYEGANNALDSSGVGFTLRVVYMAQVDYTETSEISDAVYALQGGDHEELLDVHALRDEYGADLVQL-VGFYLNTCGIGFTMQSPTSAFDGYGYSVVHANCLSN-YSHIHEIGHNMGANHNKENSHSDHAYAYAWRYCDGDIPYRTLMAYENGCSA----APRMNIFSTPDKSYAGQPQG-----TDTANNARVLNEAMVSCA 222
            +V+YT  A   + S          +ES I+ A   AN +  +SG+   L VV+ AQ +YTETS +S  + AL+  +  ++  +H LRD+YGADLVQL V    N CG+G+ M + +S+F  Y +SVV  +C +  Y+  HE+GHNMGA H++  + ++ AY+Y++ Y +    +RT+MAY + CS       R+N +S PD SY G P G     +++ANNA  L     + A
Sbjct:  231 LVVYTSAAKTAAGSQSA-------IESLITLAETEANESFTNSGIDIELNVVHTAQTNYTETS-MSTELSALRNTNDGKMDSIHTLRDDYGADLVQLWVSNGTNYCGLGYLMTNVSSSFASYAFSVVRYDCATGTYTFAHELGHNMGAEHDRYVATTEGAYSYSYGYVNTTDKWRTIMAYNDKCSDNGYNCTRINYWSNPDVSYDGVPTGKSASASNSANNALTLTNTAATIA 455          
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Match: A0A836CH47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH47_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.500e-34
Identity = 84/203 (41.38%), Postives = 114/203 (56.16%), Query Frame = 0
Query:   25 MESAISAAYEGANNALDSSGVGFTLRVVYMAQVDYTETSEISDAVYALQGGDHEELLDVHALRDEYGADLVQLVGFYLNTCGIGFTMQSPTSAFDGYGYSVVHANCLSNYSHIHEIGHNMGANHNKENSHSDHAYAYA--WRYCDGDI--PY-RTLMAYENGCSAAPRMNIFSTPDKSYAGQPQGTDTANNARVLNEAMVSCA 222
            + S I  A   AN AL +SGVGF +    +  V++   +E    V AL      E+  + A R  Y ADLVQ+V      CG G  MQSP+S+F  Y YSVV+  C + +SHIHEIGHNMGA H+  N+ +   + YA  +RYC G++  PY R++M+Y   C+ A R+  FS+P   Y G+  G   A+NARVL E     A
Sbjct:  130 IRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNE--GHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCSGEVDPPYFRSVMSYS--CTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRETKYIVA 328          
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 8.650e-34
Identity = 78/205 (38.05%), Postives = 119/205 (58.05%), Query Frame = 0
Query:   37 NNALDSSGVG-FTLRVVYMAQVDYTETSEI---SDAVYALQGGDHEELLD-------VHALRDEYGADLVQLVGFYLNTCGIGFTMQSPTSAFDGYGYSVVHANCLSNYSHIHEIGHNMGANHNKENSHSDHAYAYAWRYCDGDIPYRTLMAY-ENGCSA---------APRMNIFSTPDKSYAGQPQGTDTANNARVLNEAMVS 220
            N A+ +S +     R+V++A++ Y++ +     SD +      D E  LD       V+ LR+EY  DLVQLVG++  TCG+G+           +G+S+V +NC  N+SH HEI HNMG  H+++NS +   Y + +RYC G  PYRT+M+Y +NGC            P++N FS P+ +Y  +P GT TA+NAR + E+MV+
Sbjct:  385 NQAITNSAIADLEYRLVHVAELPYSQMTYDPIDSDDI------DLEPELDALAANSAVNDLRNEYQGDLVQLVGYFPGTCGLGYIFNGNAE----FGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDNSETQDEYRHGYRYCTGSDPYRTIMSYYQNGCGGDPTPEADPIVPQVNYFSNPEVTYLNKPTGTATADNARCIEESMVA 579          
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Match: A0A839HE77_9GAMM (Fibronectin type III domain-containing protein n=1 Tax=Thiospirillum jenense TaxID=1653858 RepID=A0A839HE77_9GAMM)

HSP 1 Score: 133 bits (334), Expect = 3.610e-32
Identity = 86/226 (38.05%), Postives = 127/226 (56.19%), Query Frame = 0
Query:    1 MVLYTKKAMLESNSMDGAVRTTDQMESAISAAYEGANNALDSSGVGFTLRVVYMAQVDYTETSEISDAVYALQGGDHEELLDVHALRDEYGADLVQLVGFYLNTCGIGFTMQSP--TSAFDGYGYSVVHANCLSNYSHIHEIGHNMGANHNKENSHSDHAYAYAWRYCDGDIPYRTLMAYE--NGCSAAPRMNIFSTPDKSYAGQPQGTDTANNARVLNEAMVSCA 222
            MV+Y+ +A+ +       + T D ++S I+AA   AN A D+S +   L  VY  QV+YTE + +  A+  LQ      + D+HALRD+Y ADLV LV    + CG G+ M S   +SAF  Y ++VV+ +CLS  S  HEIGH  G  HN E++ S  AY+Y++ Y    I +R +M+Y+     +  PR+  FS P+ +Y G   G+ TAN A+ +N      A
Sbjct:  283 MVVYSPQAVSK-------MGTEDALKSTITAAIAAANTAYDNSQINVALNPVYYGQVNYTEPATMPTALTQLQSKTDGIIDDIHALRDQYSADLVVLVDTNTDYCGYGYIMNSSYTSSAFAPYAFAVVNYSCLSLNSLAHEIGHLQGNQHNTESTTSTGAYSYSYGYRVCGI-FRDIMSYDCPTPNTGTPRVLHFSNPNVTYQGLATGSSTANAAQTINNTAAIVA 500          
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Match: UPI00037429D7 (M12 family metallo-peptidase n=2 Tax=Methylobacter TaxID=429 RepID=UPI00037429D7)

HSP 1 Score: 133 bits (334), Expect = 3.780e-32
Identity = 88/229 (38.43%), Postives = 126/229 (55.02%), Query Frame = 0
Query:    1 MVLYTKKAMLESNSMDGAVRTTDQMESAISAAYEGANNALDSSGVGFTLRVVYMAQVDYTETSEISDAVYALQGGDHEELLDVHALRDEYGADLVQLVGFYLNTCGIGFTMQSPTSAFDGYGYSVVHAN----CLSNYSHIHEIGHNMGANHNKENSHSDHAY--AYAWRYCDGDIPYRTLMAYENGCSAAPRMNIFSTPDKSYA-GQPQGTDTANNARVLNEAMVSCA 222
            MV+YT KA   ++   G       +E+ I+ A   AN A  +S V   L VVYM +V Y ET  ++ ++  L+G +  ++  VH LR++YGAD V LV    N CGI + M +P+++F  Y + VVH +    CLS+ +  HE+GHN G  H+K NS S  AY  +Y +R C     +RT+M+Y   CS   R++ FS P+ S   GQ  GT T NNA  +N      A
Sbjct:  192 MVVYTPKAKNNASGQTG-------IEAKIANAVAKANQAYINSKVDMQLNVVYMGEVSYNETGNMTTSLTDLRGTNDGKMDAVHNLRNQYGADQVLLVTADTNYCGIAYVMSNPSTSFAPYAFGVVHDDSTYACLSDNTLAHELGHNQGDQHDKANSSSAGAYDYSYGYRLCQTG-GFRTVMSYS--CSGGARVSYFSNPNVSLTTGQTTGTATENNALSMNNTKAIVA 410          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10134.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC56_ECTSI3.780e-8661.54Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarp... [more]
A0A6H5JDN0_9PHAE3.270e-8558.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCC0_ECTSI8.130e-4060.00Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarp... [more]
A0A836CMI7_9STRA2.280e-3740.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JRC1_9PHAE1.260e-3639.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0F2IZ28_9BACT1.340e-3537.77Peptidyl-Asp metalloendopeptidase n=1 Tax=Candidat... [more]
A0A836CH47_9STRA3.500e-3441.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JF50_9PHAE8.650e-3438.05LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A839HE77_9GAMM3.610e-3238.05Fibronectin type III domain-containing protein n=1... [more]
UPI00037429D73.780e-3238.43M12 family metallo-peptidase n=2 Tax=Methylobacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024079Metallopeptidase, catalytic domain superfamilyGENE3D3.40.390.10Collagenase (Catalytic Domain)coord: 5..175
e-value: 1.1E-6
score: 30.5
NoneNo IPR availablePFAMPF13583Reprolysin_4coord: 20..184
e-value: 7.1E-14
score: 51.9
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 28..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10134contigL-digitata_M_contig10134:876..8600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10134.1.1mRNA_L-digitata_M_contig10134.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10134 876..8609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10134.1.1 ID=prot_L-digitata_M_contig10134.1.1|Name=mRNA_L-digitata_M_contig10134.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=226bp
MVLYTKKAMLESNSMDGAVRTTDQMESAISAAYEGANNALDSSGVGFTLR
VVYMAQVDYTETSEISDAVYALQGGDHEELLDVHALRDEYGADLVQLVGF
YLNTCGIGFTMQSPTSAFDGYGYSVVHANCLSNYSHIHEIGHNMGANHNK
ENSHSDHAYAYAWRYCDGDIPYRTLMAYENGCSAAPRMNIFSTPDKSYAG
QPQGTDTANNARVLNEAMVSCALRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024079MetalloPept_cat_dom_sf