prot_L-digitata_M_contig10037.3.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10037.3.1
Unique Nameprot_L-digitata_M_contig10037.3.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length141
Homology
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BLAST of mRNA_L-digitata_M_contig10037.3.1 vs. uniprot
Match: D7FJS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS8_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 1.570e-52
Identity = 85/137 (62.04%), Postives = 106/137 (77.37%), Query Frame = 0 
Query:    9 VGEGERGGGD----PLPKLFELSDELG-GQGASGLRWSQLAVYDDQDLVPQCCFLLVPPGEQNFLWVGKAFAQSHSSLGNLSLTQFQALAREVATKDARRESGRVIPAASDVETAVLLVGDGNEPPEWWSSFERGYA 140
            +G G RGGG      +P+LFELSDELG G GASG+RWSQL+++DDQDL+PQCCFLLV PG+ +FLW+G+AFA     + + SL + Q LAR++A KDARR S R +P  SDVETAV++ GDGNEPPEWWS+FE GY 
Sbjct:   14 LGVGVRGGGRGRDASVPRLFELSDELGLGHGASGMRWSQLSIFDDQDLLPQCCFLLVTPGKPSFLWIGEAFAAGLVQVVS-SLEELQELARDIAVKDARRLSDRTLPLPSDVETAVIVPGDGNEPPEWWSAFESGYT 149
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BLAST of mRNA_L-digitata_M_contig10037.3.1 vs. uniprot
Match: A0A6H5L2L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L8_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 3.070e-47
Identity = 84/134 (62.69%), Postives = 104/134 (77.61%), Query Frame = 0 
Query:    8 GVGEGERGGGDPLPKLFELSDELG-GQGASGLRWSQLAVYDDQDLVPQCCFLLVPPGEQNFLWVGKAFAQSHSSLGNLSLTQFQALAREVATKDARRESGRVIPAASDVETAVLLVGDGNEPPEWWSSFERGYA 140
            GV  G RG    +P+LFELSDELG G GASG+RWSQL+++DDQDL+PQCCFLLV PG+ +FLW+G+AFA     + + SL + Q LAR++A KDARR S R +P  SDVETAV++ GDGNEPPEWWS+FE GY 
Sbjct:  853 GVRGGRRGRDASVPRLFELSDELGLGHGASGMRWSQLSIFDDQDLLPQCCFLLVTPGKPSFLWIGEAFAAGLVQVVS-SLEELQELARDIAVKDARRLSDRTLPLPSDVETAVIIPGDGNEPPEWWSAFESGYT 985
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BLAST of mRNA_L-digitata_M_contig10037.3.1 vs. uniprot
Match: A0A835YKW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW6_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.230e-5
Identity = 36/103 (34.95%), Postives = 51/103 (49.51%), Query Frame = 0 
Query:   40 WSQLAVYDDQDLVPQCCFLLVPPGEQN---FLWVGKAFAQSHSSLGNLSLTQFQALAREVATKDARRESGRVIPAASDVETAVLLVGDGNEPPEWWSSFERGY 139
            W +L+VYDDQDL P  C+LL+         F W+G  FA +H  +  L   +F      +A   A  E     PA  D   AV+ + +  E  E+W++FE GY
Sbjct:  663 WRRLSVYDDQDLAPDACYLLLCQCSARAAAFAWIGHEFAAAH--MRALPPREF------LAAVSACSEQW---PAGVDAGAAVVEMPEA-ESDEFWAAFEAGY 753
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10037.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJS8_ECTSI1.570e-5262.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2L8_9PHAE3.070e-4762.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKW6_9STRA2.230e-534.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 21..138
e-value: 3.3E-5
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10037contigL-digitata_M_contig10037:2651..7807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10037.3.1mRNA_L-digitata_M_contig10037.3.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10037 2651..7807 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10037.3.1 ID=prot_L-digitata_M_contig10037.3.1|Name=mRNA_L-digitata_M_contig10037.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=141bp
RAGGAGGGVGEGERGGGDPLPKLFELSDELGGQGASGLRWSQLAVYDDQD
LVPQCCFLLVPPGEQNFLWVGKAFAQSHSSLGNLSLTQFQALAREVATKD
ARRESGRVIPAASDVETAVLLVGDGNEPPEWWSSFERGYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029006ADF-H/Gelsolin-like_dom_sf