prot_L-digitata_M_contig100254.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100254.1.1
Unique Nameprot_L-digitata_M_contig100254.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length45
Homology
BLAST of mRNA_L-digitata_M_contig100254.1.1 vs. uniprot
Match: A0A6H5KJ55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ55_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 6.390e-20
Identity = 39/45 (86.67%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 RRGWFYHKAVWLILPGGKKVVLTARVYKPLFGQAEGELVLLEMPQ 45
            +RGWFYHKAVW++LPGGKKVVLTARV+KP+FGQAEGELVLLEMP+
Sbjct:  749 KRGWFYHKAVWVVLPGGKKVVLTARVHKPIFGQAEGELVLLEMPR 793          
BLAST of mRNA_L-digitata_M_contig100254.1.1 vs. uniprot
Match: D7FTN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN5_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 6.410e-20
Identity = 39/45 (86.67%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 RRGWFYHKAVWLILPGGKKVVLTARVYKPLFGQAEGELVLLEMPQ 45
            +RGWFYHKAVW++LPGGKKVVLTARV+KP+FGQAEGELVLLEMP+
Sbjct:  407 KRGWFYHKAVWVVLPGGKKVVLTARVHKPIFGQAEGELVLLEMPR 451          
BLAST of mRNA_L-digitata_M_contig100254.1.1 vs. uniprot
Match: A0A836CJ47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ47_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 5.590e-11
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    1 RRGWFYHKAVWLILPGGKKVVLTARVYKPLFGQAEGELVLLEMP 44
            ++GWFYHKAVW+ +P G++ VL AR  KPLFG   GELVL +MP
Sbjct:   61 KKGWFYHKAVWVNMPDGRRGVLAARATKPLFGGGRGELVLFDMP 104          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100254.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJ55_9PHAE6.390e-2086.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTN5_ECTSI6.410e-2086.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJ47_9STRA5.590e-1161.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100254contigL-digitata_M_contig100254:596..730 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100254.1.1mRNA_L-digitata_M_contig100254.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100254 596..730 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100254.1.1 ID=prot_L-digitata_M_contig100254.1.1|Name=mRNA_L-digitata_M_contig100254.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=45bp
RRGWFYHKAVWLILPGGKKVVLTARVYKPLFGQAEGELVLLEMPQ
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