prot_L-digitata_M_contig100210.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100210.1.1
Unique Nameprot_L-digitata_M_contig100210.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length42
Homology
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Match: A0A520NS40_9PROT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NS40_9PROT)

HSP 1 Score: 79.3 bits (194), Expect = 3.360e-16
Identity = 36/41 (87.80%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 EQYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKLDG 41
            +QYK GNEKVLGWFVGQVMKAT GKANPQAVNE+LR+KLDG
Sbjct:  443 DQYKSGNEKVLGWFVGQVMKATHGKANPQAVNEMLRKKLDG 483          
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Match: A0A2G2R5Z6_9PROT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2G2R5Z6_9PROT)

HSP 1 Score: 77.8 bits (190), Expect = 1.180e-15
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 EQYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKLDG 41
            EQYKGGNEK+LGWFVGQVMKATQGKANP  VN++L++KLDG
Sbjct:  445 EQYKGGNEKILGWFVGQVMKATQGKANPGQVNKLLKEKLDG 485          
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Match: A0A6N7FC23_9PROT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FC23_9PROT)

HSP 1 Score: 76.6 bits (187), Expect = 3.020e-15
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    2 QYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKLDG 41
            QY+GGNEK+LGWFVGQVMKATQGKANPQ VNEIL++KL G
Sbjct:  445 QYRGGNEKILGWFVGQVMKATQGKANPQMVNEILKKKLGG 484          
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Match: A0A2S6Q9L2_9PROT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q9L2_9PROT)

HSP 1 Score: 75.9 bits (185), Expect = 5.640e-15
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 EQYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKLD 40
            EQYKGGNEKV GWFVGQVM+AT GKANPQ VNE LR+KLD
Sbjct:  443 EQYKGGNEKVFGWFVGQVMRATHGKANPQVVNEFLRKKLD 482          
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Match: A0A2D8G451_9PROT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G451_9PROT)

HSP 1 Score: 75.1 bits (183), Expect = 1.070e-14
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    2 QYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKLDG 41
            QYKGGNEKV+GWFVGQVMKAT GKANP AVNE+L +KLDG
Sbjct:  444 QYKGGNEKVVGWFVGQVMKATNGKANPXAVNELLLKKLDG 483          
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Match: A0A351T7A9_9PROT (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T7A9_9PROT)

HSP 1 Score: 70.1 bits (170), Expect = 1.480e-14
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 EQYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKLD 40
            E+ KGG EK+LGWFVGQVMKATQGKANPQ VNE+LR K D
Sbjct:   63 EEVKGGKEKLLGWFVGQVMKATQGKANPQIVNEMLRGKFD 102          
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Match: A0A843RJR1_9PROT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A843RJR1_9PROT)

HSP 1 Score: 73.2 bits (178), Expect = 5.050e-14
Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    1 EQYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKL 39
            EQ+KGGNEK+LGWFVGQVMKATQGKANP  VN++LR+KL
Sbjct:  443 EQFKGGNEKILGWFVGQVMKATQGKANPGLVNQVLRKKL 481          
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Match: A0A2S6TNP3_9PROT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin2 TaxID=2013075 RepID=A0A2S6TNP3_9PROT)

HSP 1 Score: 73.2 bits (178), Expect = 5.050e-14
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 EQYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKLDG 41
            EQY+ GN KVLGWFVGQ+MK TQGKANPQ VNE+LR+KL G
Sbjct:  444 EQYRAGNTKVLGWFVGQIMKETQGKANPQTVNELLRKKLSG 484          
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Match: A0A7C9KK08_9PROT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9KK08_9PROT)

HSP 1 Score: 72.8 bits (177), Expect = 6.900e-14
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 EQYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKLDG 41
            EQ++ GNEK+LGWFVGQ+MKAT GKANP AVNEILR+KL G
Sbjct:  442 EQFRSGNEKILGWFVGQIMKATGGKANPAAVNEILRKKLSG 482          
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Match: A0A2E4XSA6_9PROT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XSA6_9PROT)

HSP 1 Score: 72.8 bits (177), Expect = 6.900e-14
Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    1 EQYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKL 39
            EQY+ GNEK++GWFVGQVMK TQGKANPQAVNE+L++KL
Sbjct:  444 EQYRSGNEKIIGWFVGQVMKETQGKANPQAVNELLKKKL 482          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100210.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A520NS40_9PROT3.360e-1687.80Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A2G2R5Z6_9PROT1.180e-1582.93Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A6N7FC23_9PROT3.020e-1585.00Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A2S6Q9L2_9PROT5.640e-1585.00Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A2D8G451_9PROT1.070e-1485.00Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A351T7A9_9PROT1.480e-1480.00Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCA... [more]
A0A843RJR1_9PROT5.050e-1482.05Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A2S6TNP3_9PROT5.050e-1478.05Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A7C9KK08_9PROT6.900e-1478.05Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A2E4XSA6_9PROT6.900e-1479.49Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018027Asn/Gln amidotransferasePFAMPF02637GatB_Yqeycoord: 1..39
e-value: 3.0E-16
score: 59.7
IPR023168Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2GENE3D1.10.10.410coord: 1..41
e-value: 3.0E-19
score: 70.6
IPR003789Aspartyl/glutamyl-tRNA amidotransferase subunit B-likeSUPERFAMILY89095GatB/YqeY motifcoord: 2..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100210contigL-digitata_M_contig100210:3..128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100210.1.1mRNA_L-digitata_M_contig100210.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100210 3..128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100210.1.1 ID=prot_L-digitata_M_contig100210.1.1|Name=mRNA_L-digitata_M_contig100210.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=42bp
EQYKGGNEKVLGWFVGQVMKATQGKANPQAVNEILRQKLDG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018027Asn/Gln_amidotransferase
IPR023168GatB_Yqey_C_2
IPR003789Asn/Gln_tRNA_amidoTrase-B-like