prot_H-elongata_contig183746.4946.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: T1IUK0_STRMM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IUK0_STRMM) HSP 1 Score: 72.0 bits (175), Expect = 3.700e-13 Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 0
Query: 1 MDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAAL 81
M+ Q RG WQ+V RS V+G+R +FK+KID G K+K RLV QGFR KG +EES +L ++IRM++++ A L
Sbjct: 49 MEAQKQRGTWQLVSRSTNHKVIGSRWIFKQKIDLTGSSPKFKVRLVAQGFRITKGADFEESFALVVQPSTIRMLIAMAAKL 129
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A540MBJ7_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MBJ7_MALBA) HSP 1 Score: 70.5 bits (171), Expect = 1.610e-12 Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query: 7 RGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR 86
+G W++V + V+G++ V+K K D+DG++ +YK RLV G+ Q +G+ Y+E+ SL ++R+VLS+ A GWE R
Sbjct: 165 QGTWELVPPPVDRNVIGSKWVYKIKKDQDGKVSRYKARLVAHGYSQEQGLDYDETFSLVVRHTTVRLVLSLAAMKGWELR 244
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A540NMU0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NMU0_MALBA) HSP 1 Score: 67.8 bits (164), Expect = 3.490e-12 Identity = 31/80 (38.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query: 7 RGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR 86
+G W++V + + V+G++ V+K K D+DG++ +YK RLV QGF Q G+ Y+E+ S ++R+VLS+ A W+ R
Sbjct: 79 QGTWELVPVPQNRNVIGSKWVYKLKKDQDGKVSRYKARLVAQGFSQEHGLEYDETFSPVVRHTTVRLVLSLAAMNKWDLR 158
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: T1IMU7_STRMM (Integrase catalytic domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IMU7_STRMM) HSP 1 Score: 69.3 bits (168), Expect = 7.600e-12 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 0
Query: 5 IARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIA 79
I RG W+++ + V+G + ++KRK D G I KYK RLV QGF+Q+KGI YEES S +IR++L++ A
Sbjct: 484 IKRGTWELISKPPMARVIGCKWIYKRKTDPAGHIIKYKARLVAQGFKQIKGIDYEESYSPVVRLTTIRVILALAA 558
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A5N5FUF0_9ROSA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5FUF0_9ROSA) HSP 1 Score: 68.6 bits (166), Expect = 1.450e-11 Identity = 32/80 (40.00%), Postives = 52/80 (65.00%), Query Frame = 0
Query: 7 RGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR 86
+G W++V + + V+G++ V+K K D+DG++ +YK RLV QGF Q G+ YEE+ S ++R+VLS+ A W+ R
Sbjct: 642 QGTWELVPVPQNRNVIGSKWVYKLKKDQDGKVSRYKARLVAQGFSQEHGLDYEETFSPVVRHTTVRLVLSLAAMNKWDLR 721
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 68.2 bits (165), Expect = 2.010e-11 Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0
Query: 8 GVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWE 84
GV++ V R + + ++G++ VFK K DG++EKYK RLV QGF QV+GI Y E+ + SIR++L++ A WE
Sbjct: 1025 GVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWE 1101
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A075B0V5_ROZAC (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B0V5_ROZAC) HSP 1 Score: 67.8 bits (164), Expect = 2.660e-11 Identity = 33/76 (43.42%), Postives = 52/76 (68.42%), Query Frame = 0
Query: 5 IARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAA 80
++ G W+++E + +G++ VFK K ++ G +EKYK RLV QGF+QVKG+ YEE+ S SIR++L+I +A
Sbjct: 126 MSNGTWELMELPPDRKAIGSKWVFKTKYNERGEVEKYKARLVAQGFKQVKGVDYEETFSPVAKLNSIRIILAIASA 201
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: UPI00073A0C34 (uncharacterized protein LOC107063294 n=1 Tax=Solanum tuberosum TaxID=4113 RepID=UPI00073A0C34) HSP 1 Score: 67.8 bits (164), Expect = 2.670e-11 Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = 0
Query: 10 WQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWE 84
W++V+ K K V+G R V+K K DG I+K+K RLV +G+ Q +G+ ++E+ SL ++R V+S+ AA GWE
Sbjct: 412 WEIVDLPKGKKVIGCRWVYKIKYKADGSIDKFKARLVAKGYNQREGLDFQETFSLVVKMVTVRTVISMAAAKGWE 486
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A5N5FXC4_9ROSA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5FXC4_9ROSA) HSP 1 Score: 67.4 bits (163), Expect = 3.680e-11 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 0
Query: 7 RGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR 86
+G W++V + V+G++ V+K K D+DG++ +YK RLV QGF Q G+ YEE+ S ++R+VLS+ A W+ R
Sbjct: 606 QGTWELVPVPPNRNVIGSKWVYKIKKDQDGKVSRYKARLVAQGFSQEHGLDYEETFSPVVRHTTVRLVLSLAAMNKWDLR 685
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A4S4K4Q2_9APHY (Uncharacterized protein n=2 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K4Q2_9APHY) HSP 1 Score: 67.0 bits (162), Expect = 5.110e-11 Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 0
Query: 1 MDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWE 84
++ I W VVER V+G++ V + K D G I+KYK RLV QGF QV G+ Y E+ + ASIR+VL+I A GWE
Sbjct: 986 LESLIRNDTWTVVERPLGVNVVGSKWVLRIKKDATGAIDKYKARLVAQGFTQVYGVDYFETFAPVAKIASIRLVLAIAARNGWE 1069 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig183746.4946.1 ID=prot_H-elongata_contig183746.4946.1|Name=mRNA_H-elongata_contig183746.4946.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bpback to top |