mRNA_H-elongata_contig183746.4946.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A6A3NEQ7_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NEQ7_9STRA) HSP 1 Score: 224 bits (570), Expect = 5.530e-64 Identity = 135/356 (37.92%), Postives = 190/356 (53.37%), Query Frame = 1
Query: 7 PTTLGEAQASSEWLQWKRAIAREMDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR*LDVDMTYLEAGVKEEIYVELPEAYRDSRKKVGVLKKAMYGLVHAGLLW*DQFGIELEAKGFQRSQAGPCVF-RRILHGIVVXXXXXXXDDLLVASATKRDEEQAVGDLCSCFLIKDLGEASYYLGCHITRDRNAGTLKFDQYQYIQTVAERFGVTKTSTI--PSAAGGKALSKSDSPQTDAEVEEMRQIPYRKIVGALMWVATMTRPDISFAAHQLAIFNDNPGPTHLRAAQKALQYLWHTRDLGI 1065
PTT +A AS + QW+ A+ E+ G W +V R +G R VF K D+ GR+ +YK RLVT+GF+Q GI + E+ S SIR+VLS+ AA + LD D +L +G+K+ +Y+E+P ++R L KA+YG A W GF+ CV+ +R +G + DD+++A+ T D + L + F +K+LG A + LG I D AGT Q +YI V ERFG + P AAG K LSK+ SP TDAE MR PYR ++G L+++ T TRPDI+F QL+ F +NPG H AA + L+YL R LG+
Sbjct: 174 PTTHAQAMASGDAAQWRVAMDAELLSHERNGTWTLVPRGTANRTIGCRWVFAEKRDQYGRVVRYKARLVTKGFKQKYGIDFFETYSPVAYMNSIRVVLSVCAAYEYRMEQLDADTAFLNSGLKDRVYMEVPFGIENARDYQCQLNKAIYGSEQAASAWNKTIHRVCLGNGFKSCGVDQCVYVKRSKNGFIYVCLYD--DDMIIAAKTSEDIREVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTHNIKQTRYIDDVVERFGQENAKPVDNPCAAGLK-LSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLKSPRQLGM 526
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A6A3LZL6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LZL6_9STRA) HSP 1 Score: 218 bits (554), Expect = 9.040e-60 Identity = 133/357 (37.25%), Postives = 188/357 (52.66%), Query Frame = 1
Query: 4 EPTTLGEAQASSEWLQWKRAIAREMDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR*LDVDMTYLEAGVKEEIYVELPEAYRDSRKKVGVLKKAMYGLVHAGLLW*DQFGIELEAKGFQRSQAGPCVF-RRILHGIVVXXXXXXXDDLLVASATKRDEEQAVGDLCSCFLIKDLGEASYYLGCHITRDRNAGTLKFDQYQYIQTVAERFGVTKTSTI--PSAAGGKALSKSDSPQTDAEVEEMRQIPYRKIVGALMWVATMTRPDISFAAHQLAIFNDNPGPTHLRAAQKALQYLWHTRDLGI 1065
E L EA + + QW+ A+ E+ G W +V R +G R VF K D+ GR+ +YK RLVT+GF+Q GI + E+ S SIR+VLS+ AA + LD D +L +G+K+ +Y+E+P ++R L KA+YG A W GF+ CV+ +R +G + DD+++A+ T D + L + F +K+LG A + LG I D AGT Q +YI V ERFG + P AAG K LSK+ SP TDAE MR PYR ++G L+++ T TRPDI+F QL+ F +NPG H AA + L+YL R LG+
Sbjct: 630 EDGLLAEAVLAGDAAQWRVAMDAELLSHERNGTWTLVPRGTANRTIGCRWVFAEKRDQYGRVVRYKARLVTKGFKQKYGIDFFETYSPVAYMNSIRVVLSVCAAYEYRMEQLDADTAFLNSGLKDRVYMEVPFGIENARDYQCQLNKAIYGSEQAASAWNKTIHRVCLGNGFKSCGVDQCVYVKRSKNGFIYVCLYD--DDMIIAAKTSEDIREVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTHNIKQTRYIDDVVERFGQENAKPVDNPCAAGLK-LSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLKSPRQLGM 983
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 210 bits (534), Expect = 6.950e-59 Identity = 124/355 (34.93%), Postives = 192/355 (54.08%), Query Frame = 1
Query: 4 EPTTLGEAQASSEWLQWKRAIAREMDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR*LDVDMTYLEAGVKEEIYVELPEAYRDSRKK--VGVLKKAMYGLVHAGLLW*DQFGIELEAKGFQRSQAGPCVF-RRILHGIVVXXXXXXXDDLLVASATKRDEEQAVGDLCSCFLIKDLGEASYYLGCHITRDRNAGTLKFDQYQYIQTVAERFGVTKTSTIPSAAG-GKALSKSDSPQTDAEVEEMRQIPYRKIVGALMWVATMTRPDISFAAHQLAIFNDNPGPTHLRAAQKALQYLWHTRD 1056
+P +L EA S+EW +WK AI +EM + G + +VE K ++G++ VF+ K + + IE YK RLV QGF QV GI + E+ + ASI ++L++ A WE +DV YL ++EEIY++ P + K+ V LK+ +YGL +G + + EL + G RS+ CVF R +++ DD +A TK ++ + F + DLGE + LG + RDR+ TL Q+ YI + RF + ++ + G LS P T + E+M+ IPYR+++G+LM+ A TRPDI++A L+ F NPG H AA++ +YL TR+
Sbjct: 111 DPASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRE 464
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM) HSP 1 Score: 212 bits (539), Expect = 1.250e-57 Identity = 121/354 (34.18%), Postives = 190/354 (53.67%), Query Frame = 1
Query: 7 PTTLGEAQASSEWLQWKRAIAREMDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR*LDVDMTYLEAGVKEEIYVELPEAYRDSRKKVGVLKKAMYGLVHAGLLW*DQFGIELEAKGFQRSQAGPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVGDLCSCFLIKDLGEASYYLGCHITRDRNAGTLKFDQYQYIQTVAERFGVTKTSTIPSAA-GGKALSKSDSPQTDAEVEEMRQIPYRKIVGALMWVATMTRPDISFAAHQLAIFNDNPGPTHLRAAQKALQYLWHTRDLGI 1065
PTT +A S+E +W +A+ E+ G W +V R+ +G R VF +K ++ GR+ +YK RLV +GF+Q G+ + E+ S SIR+VLS++ A + LD D +L + +KE++++E+P ++ + L KA+YGL A W GF A CV+ + V DD+++A+ T ++ ++ L S F +K+LGE + LG I DR A TL Q +YI V RF + + G L+K SP T+AE E+MR PYR ++G L+++ T TRPD+++ QL+ F +NPG H +AA + L+YL T++ GI
Sbjct: 837 PTTYQQAMKSNEASKWIKAMNSELKAHADNGSWTLVRRTSGARPIGCRWVFAKKRNEHGRVVRYKARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKAYVTEQLDADTAFLNSDLKEQVFMEVPYGILNAEHMMCKLDKAIYGLKQAASAWHQTIHAVFMKIGFHSCGADQCVYVKGTKDNYVYVCLYV-DDMIIAAKTNKEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFNQQDAKAVVNPCESGMKLTKMQSPTTNAEREDMRNKPYRSLIGCLLYITTCTRPDVAYIVTQLSRFLENPGQQHWKAAIRVLRYLKTTKEFGI 1189
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE) HSP 1 Score: 205 bits (522), Expect = 2.460e-57 Identity = 129/357 (36.13%), Postives = 193/357 (54.06%), Query Frame = 1
Query: 4 EPTTLGEAQASSEWLQWKRAIAREMDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR*LDVDMTYLEAGVKEEIYVELPEAYRDSRKKVGV-LKKAMYGLVHAGLLW*DQFGIELEAKGFQRSQAGPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVGDLCSCFLIKDLGEASYYLGCHITRDRNAGTLKFDQYQYIQTVAERFGVT--KTSTIPSAAGGKALSKSDSPQTDAEVEEMRQIPYRKIVGALMWVATMTRPDISFAAHQLAIFNDNPGPTHLRAAQKALQYLWHTRDLGI 1065
EP T +A S QW+ A+ EM ++ G W +VE + +G++ V++ K DG IE++K RLV +GF Q G Y E+ + T Q ++R VL++ A R +D+ ++ + + EIY+ PE +R ++ L K++YGL A LW ++ GI + +Q +++ + V DD+ +AS ++ ++ V L F ++DLG SY LG ITR+R L Q QYI E FG+T K +T P LSKS SPQT EVEEM +IPY VG+L+++ATMTRPDI++ A LA FN NPG H +A + L+YL T D+ +
Sbjct: 103 EPVTYRQAITSPNAEQWQEAMIEEMTAHLSNGTWNLVELPPGQKAIGSKWVYRIKHKADGSIERFKARLVAKGFSQRLGFDYSETFASTMRQNTLRTVLALAAVEDLHLRSIDISHAFINSDIDTEIYMTQPEGFRQGGPRIVCRLDKSLYGLKQAPRLWDEKLGIYI----YQNDNV------KVIVPVFV-------DDITLASKSEDMLDEFVAKLSKHFKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGMTDCKPATTPMTPN-LILSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSNPGMDHWKAVKHVLRYLKGTMDIKL 441
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 211 bits (536), Expect = 3.230e-57 Identity = 132/357 (36.97%), Postives = 198/357 (55.46%), Query Frame = 1
Query: 13 TLGEAQASSEWLQWKRAIAREMDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR*LDVDMTYLEAGVKEE--IYVELPE--AYRDSRKKVGVLKKAMYGLVHAGLLW*DQFGIELEAKGFQRSQAGPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEE--QAVGDLCSCFLIKDLGEASYYLGCHITRDRNAGTLKFDQYQYIQTVAERFGVT--KTSTIPSAAGGKALSKSDSPQTDAEVEEMRQIPYRKIVGALMWVATMTRPDISFAAHQLAIFNDNPGPTHLRAAQKALQYLWHTRDL 1059
TL EA+ +W +W AI E++ G W++V+R V+G++ V + K D G I+KYK RLV QGF Q+ GI Y E+ + +SIR++L+I A GW+ + D + YL + + ++ IY+E P A +D + V L+KA+YGL G W + I L GF R+++ VF I + D + S+T E + +G+ + + DLGE S+ LG + RDR A TL Q+ YI ++ RF T K S+IP + L+KS P + A++ MR+IPYR+ +G+LM+ A TRPDISFA LA F+ NPG TH A ++ +YL T++L
Sbjct: 965 TLEEARKRPDWPKWLAAIRAELESLKLNGTWELVDRPSAVNVVGSKWVLRIKKDASGAIDKYKARLVAQGFTQIHGIDYFETFAPVAKLSSIRLILAIAARNGWDIQSFDFNSAYLNSTLDDDEVIYLEQPPDFAEKDPKNYVLRLRKALYGLKQGGRKWYEHLCIALADLGFNRAESDYGVFFAIDANNITVLAIHVDDCAITGSSTPLISEYKRRIGEK---YPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNL 1317
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI) HSP 1 Score: 209 bits (532), Expect = 1.060e-56 Identity = 127/357 (35.57%), Postives = 193/357 (54.06%), Query Frame = 1
Query: 4 EPTTLGEAQASSEWLQWKRAIAREMDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR*LDVDMTYLEAGVKEEIYVELP--EAYRDSRKKVGVLKKAMYGLVHAGLLW*DQFGIELEAKGFQRSQAGPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVGDLCSCFLIKDLGEASYYLGCHITRDRNAGTLKFDQYQYIQTVAERFGVTKTSTIPSAAGG-KALSKSDSPQTDAEVEEMRQIPYRKIVGALMWVATMTRPDISFAAHQLAIFNDNPGPTHLRAAQKALQYLWHTRDLGI 1065
EP+ EA+ +W +W+ AI E+D +A G W++V R V+ ++ V + K + G I+KYK RLV +GF QV G+ Y ++ + +SIR++L+I A GW A D + YL + + E++Y+E P A+ D + V L+KA+YGL G W + L GF R +A VF + G + DD L+ +++R + + + + I DLG S+ LG I+ D AGTL Q+ YI+ + RF T + + LSK+ P++ AEV MR++PYR+ +GALM+ A TRPDI+FA LA F NPG H A ++ +YL TR L +
Sbjct: 798 EPS-YAEAKKRPDWPKWQEAIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVFYKH-EGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSL 1152
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: Q572I3_PHYIN (Putative polyprotein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=Q572I3_PHYIN) HSP 1 Score: 209 bits (531), Expect = 1.460e-56 Identity = 130/355 (36.62%), Postives = 186/355 (52.39%), Query Frame = 1
Query: 7 PTTLGEAQASSEWLQWKRAIAREMDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR*LDVDMTYLEAGVKEEIYVELPEAYRDSRKKVGVLKKAMYGLVHAGLLW*DQFGIELEAKGFQRSQAGPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVGDLCSCFLIKDLGEASYYLGCHITRDRNAGTLKFDQYQYIQTVAERFGVTKTSTI--PSAAGGKALSKSDSPQTDAEVEEMRQIPYRKIVGALMWVATMTRPDISFAAHQLAIFNDNPGPTHLRAAQKALQYLWHTRDLGI 1065
P T EA AS+E +W+RA+ E++ G W +V R +G R VF +K D++GR+ +YK RLV QGF+Q GI + E+ S SIR VL++ G+ LD D +L + + +Y+++P ++ L KA+YGL A W GF+ A CV+ + V DD+++A+ T+ + + L S F +K+LGEA + LG I DR GTL Q +YI + ERF + P AA K LSK SP T+ E EM PYR ++G LM++ T TRPDI++ QLA F ++PG H +AA + LQYL TR GI
Sbjct: 827 PNTYAEAIASNEAGEWRRAMQSELNSHSRNGTWTLVPRGTTTRSIGCRWVFTKKRDENGRVIRYKARLVAQGFKQKFGIDFFETYSPVANMNSIRAVLAVCVTCGYIMEQLDADTAFLNSCLVNLVYMDVPLGLENAEGMKCNLLKAIYGLKQAASAWNKTIHRVFLQNGFKCCGADQCVYVKRSKNAFVYVCLYV-DDMIIAAKTRDEIREVKNALKSAFKMKELGEAKFILGMEIDHDRECGTLMIKQTRYIDDIVERFNQRNAKMVEYPCAANLK-LSKMMSPTTEKERAEMWSRPYRSLIGCLMYITTCTRPDIAYVVTQLARFLEDPGTQHWKAAIRVLQYLKSTRHHGI 1179
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A4S4K4Q2_9APHY (Uncharacterized protein n=2 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K4Q2_9APHY) HSP 1 Score: 208 bits (530), Expect = 2.030e-56 Identity = 136/355 (38.31%), Postives = 191/355 (53.80%), Query Frame = 1
Query: 13 TLGEAQASSEWLQWKRAIAREMDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR*LDVDMTYLEAGVK--EEIYVELPEAY--RDSRKKVGVLKKAMYGLVHAGLLW*DQFGIELEAKGFQRSQAGPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVGDLCSCFLIKDLGEASYYLGCHITRDRNAGTLKFDQYQYIQTVAERFGVT--KTSTIPSAAGGKALSKSDSPQTDAEVEEMRQIPYRKIVGALMWVATMTRPDISFAAHQLAIFNDNPGPTHLRAAQKALQYLWHTRDL 1059
TL EA+ +W +W AI E++ I W VVER V+G++ V + K D G I+KYK RLV QGF QV G+ Y E+ + ASIR+VL+I A GWE + D + YL + + EEIY+E P + +D + V LKKA+YGL G W + I L GF+R++A VF + G + DD ++ + Q L + + DLG S+ LG +TRD A TL Q+ YI ++ RF T K S+IP + L KS P + ++ MR+IPYR+ +G+LM+ A TRPDISFA LA F+ NPG H A ++ +YL T+ L
Sbjct: 965 TLEEARKRPDWAKWLAAIKAELESLIRNDTWTVVERPLGVNVVGSKWVLRIKKDATGAIDKYKARLVAQGFTQVYGVDYFETFAPVAKIASIRLVLAIAARNGWEVQSFDFNSAYLNSVLDDDEEIYLEQPPQFSLKDPKLHVLRLKKALYGLKQGGRKWYEHLCIALADLGFKRAEADYGVFYAKV-GESLVLLAIHVDDCIITGNSSTLISQYKRQLGDKYSLTDLGPVSWLLGIKVTRDLEARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNIQFL-KSQCPTSLIDIARMRKIPYREAIGSLMYAAVGTRPDISFAVSTLAQFSHNPGWIHWEAVKRVFRYLLGTKML 1317
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU) HSP 1 Score: 207 bits (526), Expect = 2.260e-56 Identity = 135/362 (37.29%), Postives = 192/362 (53.04%), Query Frame = 1
Query: 4 EPTTLGEAQASSEWLQWKRAIAREMDGQIAR----GVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFRQVKGIHYEESSSLTPAQASIRMVLSIIAALGWEAR*LDVDMTYLEAGVKEEIYVELPEAYRDSRKKVGVLKKAMYGLVHAGLLW*DQFGIELEAK-GFQRSQAGPCVF-RRILHGIVVXXXXXXXDDLLVASATKRDEEQAVGDLCSCFLIKDLGEASYYLGCHITRDRNAGTLKFDQYQYIQTVAERFGVTKTS--TIPSAAGGKALSKSDSPQTDAEVEEMRQIPYRKIVGALMWVATMTRPDISFAAHQLAIFNDNPGPTHLRAAQKALQYLWHTRDLGI 1065
EP TL EAQA+ EW +WKRA MD +IA+ G + + + +G R V++ K D DGRI +YK RLV QGF Q G+ Y E+ + S+R++L+I A E DV YL A + EEIY+ P Y + + L+KA+YGL AG W L A GFQR + PCV+ ++ G+ + DD+ + T + L + I DLG LG I+RDR TL Q QYIQTV +RF + + T P K + + DA++ EM+ +PY+ ++G+LM+ A TRPDIS+A L+ ++ PG TH AA++ L+YL T+D GI
Sbjct: 14 EPRTLSEAQAAPEWPEWKRA----MDDEIAQLRKLGTYAPADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFDVVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLRKALYGLKQAGXQWNHHINKVLTADLGFQRLNSDPCVYLKKSPKGLTIVGMHV--DDMAALADTPDLMDTLRSGLARHYKITDLGTPRLLLGFEISRDRKKRTLSIKQSQYIQTVLDRFKMADCNPVTTPLDPNVKLCKEPE----DADLSEMKGVPYQALIGSLMYAALGTRPDISYAVQALSQYSARPGITHWTAAKRVLRYLKGTQDFGI 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig183746.4946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig183746.4946.1 >prot_H-elongata_contig183746.4946.1 ID=prot_H-elongata_contig183746.4946.1|Name=mRNA_H-elongata_contig183746.4946.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp MDGQIARGVWQVVERSKRKTVLGTRVVFKRKIDKDGRIEKYKCRLVTQGFback to top mRNA from alignment at H-elongata_contig183746:182..1246+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig183746.4946.1 ID=mRNA_H-elongata_contig183746.4946.1|Name=mRNA_H-elongata_contig183746.4946.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1065bp|location=Sequence derived from alignment at H-elongata_contig183746:182..1246+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig183746:182..1246+ >mRNA_H-elongata_contig183746.4946.1 ID=mRNA_H-elongata_contig183746.4946.1|Name=mRNA_H-elongata_contig183746.4946.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=522bp|location=Sequence derived from alignment at H-elongata_contig183746:182..1246+ (Himanthalia elongata Himel1 dioecious)back to top |