mRNA_H-elongata_contig18339.4930.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.210e-44 Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = 1
Query: 28 QDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDPASKYLQKWLGMSKKTADVTAQLACPAGIQLFSNPLNLLGMDLYNNPNSSAAARGKLIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFASLF 435
+D FTRMF + P P STY LFT RD TV ASFN+P P S++LQ GMSK AD TAQ+ACPA +Q S PL+L+G+DLYNNP S+A R + S+YTSS+ R+ R GPAFGIGGVGNTAFRK + F
Sbjct: 143 KDRAFTRMFGSSAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARF 277
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Match: A0A261XX22_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XX22_9FUNG) HSP 1 Score: 139 bits (350), Expect = 1.770e-38 Identity = 72/130 (55.38%), Postives = 84/130 (64.62%), Query Frame = 1
Query: 28 QDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDPASKYLQKWLGMSKKTADVTAQLACPAGIQLFSNPLNLLGMDLYNNPNSSAAARGKLIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 417
+D FTRMF TV FP +Y LF ARD +TVAASFN P S YLQK +K TAD+ AQL CPA +Q S PL+LLG+DLYN N + R LI EY S + R++R GPAFGIGGVGNT R
Sbjct: 91 KDRAFTRMFGTVASHSFPLPSYALFAARDSLTVAASFNAPQLVSHYLQKHNISTKHTADIVAQLGCPALVQFVSTPLHLLGLDLYNRSNMKLSDRAGLIRREYLKSTLARIARIGPAFGIGGVGNTLLRS 220
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Match: A0A8H7S7R9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S7R9_9FUNG) HSP 1 Score: 139 bits (349), Expect = 5.090e-38 Identity = 72/131 (54.96%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 28 QDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDPASKYLQKWLGMSKKTADVTAQLACPAGIQLFSNPLNLLGMDLYNNPNSSAAARGKLIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 420
+D FTRMF R P TYL F ARD MTVAASFN P + +LQ+ M ++ + VTAQLACPA IQ S P++LLG+DLYN PN+++ R LI EY S + RV R GPAFGIGGVGNT FR +
Sbjct: 124 KDRTFTRMFGVTTTRALPKFTYLCFAARDSMTVAASFNAPTYFASWLQENYSMDQRNSKVTAQLACPALIQFISTPIHLLGLDLYNRPNATSNQRVGLIRKEYFKSALARVGRIGPAFGIGGVGNTYFRGF 254
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Match: A0A8H7U8D9_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U8D9_MORIS) HSP 1 Score: 137 bits (345), Expect = 3.420e-37 Identity = 71/132 (53.79%), Postives = 89/132 (67.42%), Query Frame = 1
Query: 28 QDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDPASKYLQ-KWLGMSKKTADVTAQLACPAGIQLFSNPLNLLGMDLYNNPNSSAAARGKLIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 420
+D FTRMF TV +P P +YLLF +RD +T+ +SFN P SKY+Q + + S K +D AQLACPA +Q S PL+LLG+DLYNN NSS+ R LI EY S++ RV+R PAFGIGGVGN R Y
Sbjct: 140 KDRAFTRMFGTVASKPLPLFSYLLFASRDSLTILSSFNAPPIVSKYIQTEGILNSSKMSDTIAQLACPAVMQFISTPLHLLGLDLYNNSNSSSGQRLSLIRREYVKSVLARVARIAPAFGIGGVGNNYVRSY 271
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Match: A0A8H7PPD2_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PPD2_9FUNG) HSP 1 Score: 134 bits (338), Expect = 3.720e-36 Identity = 69/132 (52.27%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 28 QDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDPASKYLQ-KWLGMSKKTADVTAQLACPAGIQLFSNPLNLLGMDLYNNPNSSAAARGKLIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 420
+D FTRMF TV +P PA +YLLF ARD +T+AASFN P S+++Q + + S K +D +Q+ACPA +Q+ S PL+LLG+DLYNN +S+ R LI EY S++ RV R PAFGIGGVGN R Y
Sbjct: 139 KDRAFTRMFGTVATKPLPALSYLLFAARDSLTIAASFNAPPIVSQWIQTEGILNSTKASDTLSQIACPALMQVLSTPLHLLGLDLYNNSSSTTGQRFSLIRREYVKSVLARVGRIAPAFGIGGVGNNYVRSY 270
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG) HSP 1 Score: 135 bits (340), Expect = 4.300e-36 Identity = 69/130 (53.08%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 28 QDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDPASKYLQKWLGM-SKKTADVTAQLACPAGIQLFSNPLNLLGMDLYNNPNSSAAARGKLIVSEYTSSMILRVSRTGPAFGIGGVGNTAFR 414
+D FTRMF RP P +TY LF +RD +TVAASFN P+ S L ++ + K++ADV AQLACPA +Q S P++LLG+DLYN P SA R L+ EY S I R++R GPAFGIGG+GN FR
Sbjct: 151 KDRAFTRMFGLTAARPLPLATYGLFASRDALTVAASFNAPEVVSATLLRYGAVWDKRSADVVAQLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Match: A0A068RU79_9FUNG (Uncharacterized protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RU79_9FUNG) HSP 1 Score: 131 bits (330), Expect = 4.700e-35 Identity = 70/133 (52.63%), Postives = 85/133 (63.91%), Query Frame = 1
Query: 28 QDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDPASKYL--QKWLGMSKKTADVTAQLACPAGIQLFSNPLNLLGMDLYNNPNSSAAARGKLIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 420
+D F RMF P +YLLF ARD +T+AASF P +++L +K + S K A VTAQLACPA IQ S PL+LLG+DLYN N S A LI +EY S + RV+R GPAFGIGGVGNT FR +
Sbjct: 132 KDRAFARMFGVTASHSLPLMSYLLFAARDSLTIAASFTAPPVVTRWLFEEKQVFSSHKNAAVTAQLACPAAIQFISTPLHLLGLDLYNRSNVSPAQHFSLIRAEYLKSTLARVARIGPAFGIGGVGNTYFRSF 264
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Match: S2JIC1_MUCC1 (Uncharacterized protein n=4 Tax=Mucor TaxID=4830 RepID=S2JIC1_MUCC1) HSP 1 Score: 129 bits (324), Expect = 3.890e-34 Identity = 68/137 (49.64%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 13 FLSCDQDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDPASKYLQK-WLGMSKKTADVTAQLACPAGIQLFSNPLNLLGMDLYNNPNSSAAARGKLIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 420
FL +D F MF + P +YLLF ARD +T+AASF P + LQ + S+K+A+V AQL CPA +QL S P++L +DLYN P +S A RG+LI EY S + R+ R GPAFGIGGVGNT FR Y
Sbjct: 131 FLCVYKDKVFASMFGVSASKALPKLSYLLFAARDSLTIAASFTAPTYIANALQNNSIVSSEKSANVIAQLVCPAAVQLASTPVHLYALDLYNRPGASLAMRGQLIKKEYVKSTLARIGRIGPAFGIGGVGNTFFRSY 267
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 129 bits (323), Expect = 4.420e-34 Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 28 QDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDPASKYLQKWLGMSKKTADVTAQLACPAGIQLFSNPLNLLGMDLYNNPNSSAAARGKLIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFASLF 435
+D F RMF + P FP ++ LF RD +TVAASFN P +K L+ M A AQL CPA +Q S PL+LLG+DLYNN SAA R + EY S+ R+ R GPAFGIGGVGNT FR + F
Sbjct: 126 KDRAFARMFGVIAPAAFPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTF 261
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Match: A0A0B7NP43_9FUNG (Uncharacterized protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NP43_9FUNG) HSP 1 Score: 128 bits (322), Expect = 7.560e-34 Identity = 69/141 (48.94%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 1 CEYSFLSCDQDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDPASKYLQKWLGMS-KKTADVTAQLACPAGIQLFSNPLNLLGMDLYNNPNSSAAARGKLIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 420
C FL +D F MF + P +YLLF ARD +T+AASF P + LQ +S +K+A+V AQL CPA +QL S P++L +DLYN P S A RG+LI EY S + R+ R GPAFGIGGVGNT FR Y
Sbjct: 126 CVNIFLCVYKDKVFASMFGVSVSKSLPKLSYLLFAARDSLTIAASFTAPTYIANALQNSSFVSTEKSANVVAQLVCPAAVQLASTPVHLYALDLYNRPTVSMAMRGQLIKKEYVKSTLARIGRIGPAFGIGGVGNTFFRSY 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18339.4930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18339.4930.1 >prot_H-elongata_contig18339.4930.1 ID=prot_H-elongata_contig18339.4930.1|Name=mRNA_H-elongata_contig18339.4930.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp CEYSFLSCDQDLQFTRMFTTVKPRPFPASTYLLFTARDGMTVAASFNMPDback to top mRNA from alignment at H-elongata_contig18339:1393..2169- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18339.4930.1 ID=mRNA_H-elongata_contig18339.4930.1|Name=mRNA_H-elongata_contig18339.4930.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=777bp|location=Sequence derived from alignment at H-elongata_contig18339:1393..2169- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18339:1393..2169- >mRNA_H-elongata_contig18339.4930.1 ID=mRNA_H-elongata_contig18339.4930.1|Name=mRNA_H-elongata_contig18339.4930.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=888bp|location=Sequence derived from alignment at H-elongata_contig18339:1393..2169- (Himanthalia elongata Himel1 dioecious)back to top |