mRNA_H-elongata_contig183115.4919.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Match: A0A6H5L276_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L276_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.920e-31 Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 1
Query: 1 ADVLCLQDVDFFHRWWRPQLTRAGYDSIFKQRTSKSGKRREGIVIAWKRDIFDLFRSEDMEFNR 192
ADVLCLQDVD FH+WW PQLT AGYDS+FKQRTS++ REG+VIAWKRD+FDLFRS +ME NR
Sbjct: 102 ADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNR 165
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Match: D7G7V5_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V5_ECTSI) HSP 1 Score: 115 bits (289), Expect = 1.330e-28 Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 1
Query: 1 ADVLCLQDVDFFHRWWRPQLTRAGYDSIFKQRTSKSGKRREGIVIAWKRDIFDLFRSEDMEFNR 192
ADVLCLQDVD FH+WW PQLT AGYDS+FKQRTS++ REG+VIAWKRD+FDLFRS +ME NR
Sbjct: 102 ADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNR 165
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Match: A0A7S2ASI2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ASI2_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.570e-20 Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 4 DVLCLQDVDFFHRWWRPQLTRAGYDSIFKQRTSKSGKRREGIVIAWKRDIFDLFRSEDMEFN 189
D++CLQDVD + +WRPQL +GYDSIFKQRTSK EG+++AW R F L RSE +EFN
Sbjct: 29 DLICLQDVDNYDDFWRPQLRISGYDSIFKQRTSKVSPHNEGVLVAWTRTKFQLIRSETLEFN 90
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Match: A0A5D6YJ19_9STRA (Fibronectin type-III domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YJ19_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.530e-13 Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 1 ADVLCLQDVDFFHRWWRPQLTRAGYDSIFKQR---TSKSGKRREGIVIAWKRDIFDLFRSEDMEFN 189
AD+LCLQ+VD + WW QLT GYDS+F R + S EG+V A++RD F LFRS+ ++ N
Sbjct: 99 ADILCLQEVDDYDDWWAAQLTAVGYDSVFAPRPRASDSSDTMDEGLVTAFRRDAFQLFRSKQIDLN 164
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Match: A0A2D4BK15_PYTIN (Fibronectin type-III domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK15_PYTIN) HSP 1 Score: 68.2 bits (165), Expect = 7.980e-12 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 ADVLCLQDVDFFHRWWRPQLTRAGYDSIFKQRTSKSGKRREGIVIAWKRDIFDLFRSEDMEFN 189
ADVLCLQ+ D + +W QLT GYDS+F + SG R +G++IA++R+ F LFRSE ++ N
Sbjct: 73 ADVLCLQEADDYDDFWSVQLTDTGYDSVFA--SHPSGTRDDGLLIAFRRERFQLFRSETIDLN 133
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Match: K3WS66_GLOUD (Fibronectin type-III domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS66_GLOUD) HSP 1 Score: 65.9 bits (159), Expect = 5.210e-11 Identity = 27/63 (42.86%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 1 ADVLCLQDVDFFHRWWRPQLTRAGYDSIFKQRTSKSGKRREGIVIAWKRDIFDLFRSEDMEFN 189
AD++CLQ+VD + WW +L GYDS++ +R+ S +G+V A++RD+F LF S+ +E N
Sbjct: 116 ADIMCLQEVDDYDDWWAAKLISNGYDSVYARRSGSSMD--DGVVTAFRRDVFQLFCSKAVELN 176
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Match: A0A225UKI4_9STRA (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UKI4_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.120e-9 Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 1 ADVLCLQDVDFFHRWWRPQLTRAGYDSIFKQR---TSKSGKRR--EGIVIAWKRDIFDLFRSEDMEFN 189
AD++CLQ+VD + WW +L AGYDSI+ TS S + +G+V A+++ F LFRS ++ N
Sbjct: 76 ADIMCLQEVDEYDDWWAAELAIAGYDSIYATSAAPTSASATKEIDDGLVTAFRKSTFQLFRSTEVHLN 143
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Match: T0PZ96_SAPDV (Fibronectin type-III domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PZ96_SAPDV) HSP 1 Score: 61.6 bits (148), Expect = 1.620e-9 Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 1 ADVLCLQDVDFFHRWWRPQLTRAGYDSIFKQRTSKSGKRREGIVIAWKRDIFDLFRSEDMEFN 189
ADV+CLQ+VD + +W P L GYDS++ R G +G+VIA++R F +FR++ +EFN
Sbjct: 76 ADVVCLQEVDDYELFWIPALNALGYDSVYHCRP---GDHDDGLVIAFRRLNFQIFRTQRIEFN 135
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Match: G4ZS96_PHYSP (Fibronectin type-III domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZS96_PHYSP) HSP 1 Score: 61.6 bits (148), Expect = 1.620e-9 Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 1 ADVLCLQDVDFFHRWWRPQLTRAGYDSIFKQRTSKSGKR-----REGIVIAWKRDIFDLFRSEDMEFN 189
AD++CLQ+VD + WW +L AGYDSI+ + S EG+V A+++ F LFRS ++ N
Sbjct: 81 ADIMCLQEVDEYDDWWAVELATAGYDSIYATSAAPSSAAVAKEIDEGLVTAFRKSTFQLFRSSEVHLN 148
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Match: A0A421FB39_9STRA (Fibronectin type-III domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FB39_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 2.210e-9 Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 1 ADVLCLQDVDFFHRWWRPQLTRAGYDSIFKQRTSKSGKRR-------EGIVIAWKRDIFDLFRSEDMEFN 189
AD++CLQ++D + WW +L AGYDSI+ TS + + EG+V A+++ F LFRSE++ N
Sbjct: 79 ADIMCLQEIDEYDDWWAAELATAGYDSIYA--TSAAPQSAVVVNAIDEGLVTAFRKSTFQLFRSEEVHLN 146 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig183115.4919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig183115.4919.1 >prot_H-elongata_contig183115.4919.1 ID=prot_H-elongata_contig183115.4919.1|Name=mRNA_H-elongata_contig183115.4919.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp ADVLCLQDVDFFHRWWRPQLTRAGYDSIFKQRTSKSGKRREGIVIAWKRDback to top mRNA from alignment at H-elongata_contig183115:805..999- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig183115.4919.1 ID=mRNA_H-elongata_contig183115.4919.1|Name=mRNA_H-elongata_contig183115.4919.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=195bp|location=Sequence derived from alignment at H-elongata_contig183115:805..999- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig183115:805..999- >mRNA_H-elongata_contig183115.4919.1 ID=mRNA_H-elongata_contig183115.4919.1|Name=mRNA_H-elongata_contig183115.4919.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at H-elongata_contig183115:805..999- (Himanthalia elongata Himel1 dioecious)back to top |