mRNA_H-elongata_contig182905.4909.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig182905.4909.1
Unique NamemRNA_H-elongata_contig182905.4909.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 3.650e-122
Identity = 174/227 (76.65%), Postives = 196/227 (86.34%), Query Frame = 1
Query:    1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
            IG+SG++IQTQA K  SEMG  DF AS GWL  FL R+GF H+NLHG+AGDVD+ K E++IA IR+QL+GFDVE IFNMDETGLFFRCFPR TYVT  E AAG+NRKTARGSKAMK KDRC VVACCNTTGSLK PLAVISTAKNPMVFR++R+SPIPYYSQ SAWLDS++ Q+WFD+VF PF K+ TGKKV LLWDNC GH IK+DDPQI IIFLPPNVTSV+QPM
Sbjct:   52 IGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPM 278          
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 1.510e-120
Identity = 174/227 (76.65%), Postives = 196/227 (86.34%), Query Frame = 1
Query:    1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
            IG+SG++IQTQA K  SEMG  DF AS GWL  FL R+GF H+NLHG+AGDVD+ K E++IA IR+QL+GFDVE IFNMDETGLFFRCFPR TYVT  E AAG+NRKTARGSKAMK KDRC VVACCNTTGSLK PLAVISTAKNPMVFR++R+SPIPYYSQ SAWLDS++ Q+WFD+VF PF K+ TGKKV LLWDNC GH IK+DDPQI IIFLPPNVTSV+QPM
Sbjct:  257 IGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPM 483          
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 2.420e-107
Identity = 160/230 (69.57%), Postives = 187/230 (81.30%), Query Frame = 1
Query:    1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLK---GPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
            +G+SG +IQ QA KI ++MG  +FKA+NGWL  FL R+ F+HV LHG+AGDVD+ K+ ++I  IR+QL+ FDV+FIFNMDE GLFFRCFPR TYVT  E AAG+N KTARGSKAMK KDRC VVACCNTTGSL     PLAVIST+K PMVFR+VRK P PY++Q SAWLD++I Q+WFD+VF PF K  T KKVALLWDNC GH IKS+DPQI IIFLPPNV SVYQPM
Sbjct:   86 MGVSGSMIQAQALKIAAQMGKTNFKATNGWLYRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDVDFIFNMDEMGLFFRCFPRGTYVTRGEAAAGVNSKTARGSKAMKAKDRCTVVACCNTTGSLMVPFXPLAVISTSKKPMVFRHVRKPPCPYFAQSSAWLDAAICQRWFDEVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQIVIIFLPPNVNSVYQPM 315          
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JV34_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV34_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 3.450e-105
Identity = 160/260 (61.54%), Postives = 190/260 (73.08%), Query Frame = 1
Query:    1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDV---------------------------------DRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
            +G+SG++I+TQA K  +E+ V +F AS+GWL  FL+R+G  H+NLHG+AGD                                  ++A  EK+IA I +QL+GFDVE IFNM+ETGLF RCFPR TYVT  E AAGLN+KTARGSKAMK KDRC VV+CCNTTGSLK PLAVI TAK+PMVFR+VRK   PYY+Q S WLDSS+ Q+WFD+VF PF K+ TGKKVALLWDNC GH IK+DDPQI IIFLPPNVTSV+QPM
Sbjct:    6 LGLSGIMIRTQATKFAAEINVTNFTASDGWLHRFLSRYGLVHINLHGEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKAAAEKEIAQIWEQLQGFDVELIFNMEETGLFHRCFPRGTYVTRSESAAGLNQKTARGSKAMKAKDRCTVVSCCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYAQKSGWLDSSLCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPM 265          
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5K051_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K051_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 9.550e-105
Identity = 152/227 (66.96%), Postives = 181/227 (79.74%), Query Frame = 1
Query:    1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
            IG+SG +IQ QA KI ++MG  +FKA+NGWL  FL R+ F+HV LHG+AGDVD+ K+ ++I  IR+ L+ FDVEFIF+MDETGLFFRCFPR TYVT  E AAG+N +T RGSKAMK KDRC VVACCNT GSL  PLAVIST+K  +VFR VRK P PY++Q SAWLD++I+Q+WFD+VF PF K  T  KVALLWD   GH IKS+DPQI +IFLPPNV SVYQPM
Sbjct:   65 IGVSGSMIQAQALKIVAQMGKNNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIRKHLQEFDVEFIFDMDETGLFFRCFPRGTYVTKGEAAAGVNSETVRGSKAMKAKDRCTVVACCNTAGSLMVPLAVISTSKKRVVFRLVRKPPCPYFAQDSAWLDAAIYQRWFDEVFVPFVKGKTSTKVALLWDKGPGHKIKSNDPQIVVIFLPPNVPSVYQPM 291          
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5KQ75_9PHAE (HTH CENPB-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ75_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 2.270e-102
Identity = 148/211 (70.14%), Postives = 176/211 (83.41%), Query Frame = 1
Query:    1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQI 633
            +G+SG++IQTQA K  +EM V +F ASNGWL  FL+R+G  H+NLH +AG+V++A  EK+IA IR+QL+GF+ E IFNMDETGLF RCFPR TYVT  E AAGLN+KTARGSKAMK KDRC VVACCNTTGSLK PLAVI TAK+PMVFR+VRK   PYY++ SAWLDS++ Q+WFD+VF PF K+ TGKKVALLWDNC GH IK+DDPQI
Sbjct:  203 LGLSGIMIQTQATKFAAEMNVTNFTASNGWLHRFLSRYGLVHINLHREAGEVNKAAAEKEIAQIREQLEGFEDELIFNMDETGLFHRCFPRGTYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYARKSAWLDSALCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQI 413          
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 4.360e-95
Identity = 164/321 (51.09%), Postives = 191/321 (59.50%), Query Frame = 1
Query:    1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRS--------------------------------------------------------------------------------------------TYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPY--YSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
            +G+SG++IQTQA K  +EM V +F ASNGWL  F +R+G  H+NLHG+AGDV++A  EK+IA IR+QL+GFDVE IFNMDETGLF RCFPR                                                                                             TYVT  E AAGLN+KTARGSKAMK KDRC VVACCNTTGSLK PLA+I TAK+PMVFR VRK   PY  Y+Q SAWLDS++ Q+WFD+VF PF K+ TGKK+ALLWDNC GH IK+DDPQI IIFLPPNVTSV+QPM
Sbjct:  244 LGLSGIMIQTQATKFAAEMNVTNFTASNGWLHRFFSRYGLVHINLHGEAGDVNKAAAEKEIAQIREQLEGFDVELIFNMDETGLFHRCFPRGMYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHXEGFDVELIFNMDETGLFYRCFXXXXXXXXXXXXXXXXXXPRGTYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHTAKDPMVFRQVRKPACPYLYYAQKSAWLDSALCQRWFDEVFVPFVKKTTGKKMALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPM 564          
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JLK3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK3_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 1.030e-88
Identity = 143/227 (63.00%), Postives = 164/227 (72.25%), Query Frame = 1
Query:    1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
            +G+SG++IQTQA K+ +EM V  F ASNGWL  FL+R+G  H+NLHG+AGDV++A  EKKIA IR+QL+GFDVE IFNMDETGLF RC            A GLN+K ARGSKAMK KDRC VVACCNTTGSLK PLAVI TAK+PMVFR+                      +WFD VF PF K+ TGKKVALLWDNC GH IK+DDPQI IIFLPPNV SV+QPM
Sbjct:    6 LGLSGIMIQTQAPKLAAEMNVTHFTASNGWLHRFLSRYGLVHINLHGEAGDVNKAAAEKKIAQIREQLEGFDVELIFNMDETGLFHRC---------SRGAPGLNQKNARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRH----------------------RWFDKVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVMSVFQPM 201          
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5KFG9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG9_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 3.060e-84
Identity = 136/227 (59.91%), Postives = 160/227 (70.48%), Query Frame = 1
Query:    1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
            IG+SG +IQ +A K  SEMG+    ASNGWL   L R    H+NLHG+AGDVD+ K+++KIA   +QL  FDVEFIFNMDET LF+RCFPR TYVT  E AAG+N+ TARGSKAMK                   PLAVI TA NPMVFR VR+ P PYY+Q SAWLD+S+ Q+WFD+VF PF K  T +KV L WDNC GH I ++DPQI IIFLPP VTSV+QPM
Sbjct:   59 IGLSGTMIQHRAVKFASEMGIK-LAASNGWLHRSLKRCQLKHINLHGEAGDVDQEKVQEKIAQTEEQLNEFDVEFIFNMDETALFYRCFPRGTYVTRQEDAAGVNKNTARGSKAMKAXV----------------PLAVIGTAANPMVFRKVRELPCPYYAQASAWLDASLCQRWFDEVFVPFVKSKTARKVTLTWDNCPGHKIINNDPQIVIIFLPPLVTSVFQPM 268          
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JYC6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC6_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 5.250e-84
Identity = 131/179 (73.18%), Postives = 148/179 (82.68%), Query Frame = 1
Query:  145 AGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
            AG   R     KIA  R +L+GFDVE IFNMD+TGLF+RCFPR TYVT  E AAG+N+KTARGSKAMK KD+C VVACCNTTGSLK PLAVI TAK+PMVFR+VRK P PYY+Q SAWLD+SI Q+WFD+VF PF K+ TGKKVALLW+NC GH IK+DDPQI IIFLPP VTSV+QPM
Sbjct:  267 AGLEARLNQWIKIARQRFELEGFDVELIFNMDQTGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDQCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKENTGKKVALLWNNCPGHEIKNDDPQIVIIFLPPKVTSVFQPM 445          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEY2_9PHAE3.650e-12276.65HTH CENPB-type domain-containing protein n=2 Tax=E... [more]
A0A6H5JV64_9PHAE1.510e-12076.65HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JNS8_9PHAE2.420e-10769.57HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JV34_9PHAE3.450e-10561.54HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5K051_9PHAE9.550e-10566.96HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KQ75_9PHAE2.270e-10270.14HTH CENPB-type domain-containing protein (Fragment... [more]
A0A6H5KA74_9PHAE4.360e-9551.09HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JLK3_9PHAE1.030e-8863.00HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KFG9_9PHAE3.060e-8459.91HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JYC6_9PHAE5.250e-8473.18DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig182905contigH-elongata_contig182905:343..1047 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score174.1
Seed ortholog evalue7.7e-41
Seed eggNOG ortholog6669.EFX68856
EggNOG free text desc.Jerky protein homolog-like
EggNOG OGs38HJW@33154,3BCG5@33208,3CXR0@33213,420II@6656,KOG3105@1,KOG3105@2759
COG Functional cat.BD
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size705
Cds size705
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930051.471796-CDS-H-elongata_contig182905:342..10471622930051.471796-CDS-H-elongata_contig182905:342..1047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig182905 343..1047 -
1691679261.8902268-CDS-H-elongata_contig182905:342..10471691679261.8902268-CDS-H-elongata_contig182905:342..1047Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig182905 343..1047 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig182905.4909.1prot_H-elongata_contig182905.4909.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig182905 343..1047 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig182905.4909.1

>prot_H-elongata_contig182905.4909.1 ID=prot_H-elongata_contig182905.4909.1|Name=mRNA_H-elongata_contig182905.4909.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAG
DVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDER
AAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFR
YVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCL
GHIIKSDDPQITIIFLPPNVTSVYQPMPRVLADNL
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mRNA from alignment at H-elongata_contig182905:343..1047-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig182905.4909.1 ID=mRNA_H-elongata_contig182905.4909.1|Name=mRNA_H-elongata_contig182905.4909.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=705bp|location=Sequence derived from alignment at H-elongata_contig182905:343..1047- (Himanthalia elongata Himel1 dioecious)
ATTGGGATTAGTGGTGTCTTGATTCAGACCCAGGCAAAAAAGATCGATTC GGAAATGGGCGTGGCGGACTTCAAGGCGAGTAACGGCTGGCTCCAGGGCT TCCTCACCCGCTTCGGCTTCTCGCACGTCAACCTGCACGGGCAAGCTGGC GACGTTGACAGGGCAAAGATGGAGAAAAAAATTGCAGCCATTCGACAGCA GCTGAAGGGGTTTGACGTCGAGTTCATCTTTAACATGGACGAGACGGGGC TCTTCTTCCGGTGTTTCCCGAGGAGCACGTACGTTACGAGCGACGAGCGT GCTGCCGGGCTGAACAGAAAAACCGCACGAGGTTCCAAAGCCATGAAGAC CAAGGACCGCTGCATGGTTGTCGCCTGCTGCAACACTACCGGCTCGCTCA AGGGGCCGCTCGCCGTCATCAGCACGGCGAAGAACCCGATGGTTTTCCGG TATGTCCGCAAGTCACCAATCCCGTATTACAGCCAACCGAGTGCCTGGCT AGATTCGTCCATCTTCCAACAGTGGTTTGACGATGTCTTCACCCCCTTTG GGAAGCAGGCAACCGGCAAGAAGGTTGCCCTCTTGTGGGACAACTGTCTA GGCCACATTATCAAGAGCGACGATCCGCAAATCACCATCATCTTCTTGCC TCCCAACGTGACATCCGTCTACCAGCCCATGCCCCGAGTATTGGCGGACA ATTTG
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Coding sequence (CDS) from alignment at H-elongata_contig182905:343..1047-

>mRNA_H-elongata_contig182905.4909.1 ID=mRNA_H-elongata_contig182905.4909.1|Name=mRNA_H-elongata_contig182905.4909.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig182905:343..1047- (Himanthalia elongata Himel1 dioecious)
ATTGGGATTAGTGGTGTCTTGATTCAGACCCAGGCAAAAAAGATCGATTC
GGAAATGGGCGTGGCGGACTTCAAGGCGAGTAACGGCTGGCTCCAGGGCT
TCCTCACCCGCTTCGGCTTCTCGCACGTCAACCTGCACGGGCAAGCTGGC
GACGTTGACAGGGCAAAGATGGAGAAAAAAATTGCAGCCATTCGACAGCA
GCTGAAGGGGTTTGACGTCGAGTTCATCTTTAACATGGACGAGACGGGGC
TCTTCTTCCGGTGTTTCCCGAGGAGCACGTACGTTACGAGCGACGAGCGT
GCTGCCGGGCTGAACAGAAAAACCGCACGAGGTTCCAAAGCCATGAAGAC
CAAGGACCGCTGCATGGTTGTCGCCTGCTGCAACACTACCGGCTCGCTCA
AGGGGCCGCTCGCCGTCATCAGCACGGCGAAGAACCCGATGGTTTTCCGG
TATGTCCGCAAGTCACCAATCCCGTATTACAGCCAACCGAGTGCCTGGCT
AGATTCGTCCATCTTCCAACAGTGGTTTGACGATGTCTTCACCCCCTTTG
GGAAGCAGGCAACCGGCAAGAAGGTTGCCCTCTTGTGGGACAACTGTCTA
GGCCACATTATCAAGAGCGACGATCCGCAAATCACCATCATCTTCTTGCC
TCCCAACGTGACATCCGTCTACCAGCCCATGCCCCGAGTATTGGCGGACA
ATTTGATTGGGATTAGTGGTGTCTTGATTCAGACCCAGGCAAAAAAGATC
GATTCGGAAATGGGCGTGGCGGACTTCAAGGCGAGTAACGGCTGGCTCCA
GGGCTTCCTCACCCGCTTCGGCTTCTCGCACGTCAACCTGCACGGGCAAG
CTGGCGACGTTGACAGGGCAAAGATGGAGAAAAAAATTGCAGCCATTCGA
CAGCAGCTGAAGGGGTTTGACGTCGAGTTCATCTTTAACATGGACGAGAC
GGGGCTCTTCTTCCGGTGTTTCCCGAGGAGCACGTACGTTACGAGCGACG
AGCGTGCTGCCGGGCTGAACAGAAAAACCGCACGAGGTTCCAAAGCCATG
AAGACCAAGGACCGCTGCATGGTTGTCGCCTGCTGCAACACTACCGGCTC
GCTCAAGGGGCCGCTCGCCGTCATCAGCACGGCGAAGAACCCGATGGTTT
TCCGGTATGTCCGCAAGTCACCAATCCCGTATTACAGCCAACCGAGTGCC
TGGCTAGATTCGTCCATCTTCCAACAGTGGTTTGACGATGTCTTCACCCC
CTTTGGGAAGCAGGCAACCGGCAAGAAGGTTGCCCTCTTGTGGGACAACT
GTCTAGGCCACATTATCAAGAGCGACGATCCGCAAATCACCATCATCTTC
TTGCCTCCCAACGTGACATCCGTCTACCAGCCCATGCCCCGAGTATTGGC
GGACAATTTG
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