mRNA_H-elongata_contig182905.4909.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE) HSP 1 Score: 367 bits (941), Expect = 3.650e-122 Identity = 174/227 (76.65%), Postives = 196/227 (86.34%), Query Frame = 1
Query: 1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
IG+SG++IQTQA K SEMG DF AS GWL FL R+GF H+NLHG+AGDVD+ K E++IA IR+QL+GFDVE IFNMDETGLFFRCFPR TYVT E AAG+NRKTARGSKAMK KDRC VVACCNTTGSLK PLAVISTAKNPMVFR++R+SPIPYYSQ SAWLDS++ Q+WFD+VF PF K+ TGKKV LLWDNC GH IK+DDPQI IIFLPPNVTSV+QPM
Sbjct: 52 IGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPM 278
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE) HSP 1 Score: 367 bits (941), Expect = 1.510e-120 Identity = 174/227 (76.65%), Postives = 196/227 (86.34%), Query Frame = 1
Query: 1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
IG+SG++IQTQA K SEMG DF AS GWL FL R+GF H+NLHG+AGDVD+ K E++IA IR+QL+GFDVE IFNMDETGLFFRCFPR TYVT E AAG+NRKTARGSKAMK KDRC VVACCNTTGSLK PLAVISTAKNPMVFR++R+SPIPYYSQ SAWLDS++ Q+WFD+VF PF K+ TGKKV LLWDNC GH IK+DDPQI IIFLPPNVTSV+QPM
Sbjct: 257 IGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPM 483
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE) HSP 1 Score: 330 bits (846), Expect = 2.420e-107 Identity = 160/230 (69.57%), Postives = 187/230 (81.30%), Query Frame = 1
Query: 1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLK---GPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
+G+SG +IQ QA KI ++MG +FKA+NGWL FL R+ F+HV LHG+AGDVD+ K+ ++I IR+QL+ FDV+FIFNMDE GLFFRCFPR TYVT E AAG+N KTARGSKAMK KDRC VVACCNTTGSL PLAVIST+K PMVFR+VRK P PY++Q SAWLD++I Q+WFD+VF PF K T KKVALLWDNC GH IKS+DPQI IIFLPPNV SVYQPM
Sbjct: 86 MGVSGSMIQAQALKIAAQMGKTNFKATNGWLYRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDVDFIFNMDEMGLFFRCFPRGTYVTRGEAAAGVNSKTARGSKAMKAKDRCTVVACCNTTGSLMVPFXPLAVISTSKKPMVFRHVRKPPCPYFAQSSAWLDAAICQRWFDEVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQIVIIFLPPNVNSVYQPM 315
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JV34_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV34_9PHAE) HSP 1 Score: 322 bits (824), Expect = 3.450e-105 Identity = 160/260 (61.54%), Postives = 190/260 (73.08%), Query Frame = 1
Query: 1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDV---------------------------------DRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
+G+SG++I+TQA K +E+ V +F AS+GWL FL+R+G H+NLHG+AGD ++A EK+IA I +QL+GFDVE IFNM+ETGLF RCFPR TYVT E AAGLN+KTARGSKAMK KDRC VV+CCNTTGSLK PLAVI TAK+PMVFR+VRK PYY+Q S WLDSS+ Q+WFD+VF PF K+ TGKKVALLWDNC GH IK+DDPQI IIFLPPNVTSV+QPM
Sbjct: 6 LGLSGIMIRTQATKFAAEINVTNFTASDGWLHRFLSRYGLVHINLHGEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKAAAEKEIAQIWEQLQGFDVELIFNMEETGLFHRCFPRGTYVTRSESAAGLNQKTARGSKAMKAKDRCTVVSCCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYAQKSGWLDSSLCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPM 265
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5K051_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K051_9PHAE) HSP 1 Score: 315 bits (808), Expect = 9.550e-105 Identity = 152/227 (66.96%), Postives = 181/227 (79.74%), Query Frame = 1
Query: 1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
IG+SG +IQ QA KI ++MG +FKA+NGWL FL R+ F+HV LHG+AGDVD+ K+ ++I IR+ L+ FDVEFIF+MDETGLFFRCFPR TYVT E AAG+N +T RGSKAMK KDRC VVACCNT GSL PLAVIST+K +VFR VRK P PY++Q SAWLD++I+Q+WFD+VF PF K T KVALLWD GH IKS+DPQI +IFLPPNV SVYQPM
Sbjct: 65 IGVSGSMIQAQALKIVAQMGKNNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIRKHLQEFDVEFIFDMDETGLFFRCFPRGTYVTKGEAAAGVNSETVRGSKAMKAKDRCTVVACCNTAGSLMVPLAVISTSKKRVVFRLVRKPPCPYFAQDSAWLDAAIYQRWFDEVFVPFVKGKTSTKVALLWDKGPGHKIKSNDPQIVVIFLPPNVPSVYQPM 291
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5KQ75_9PHAE (HTH CENPB-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ75_9PHAE) HSP 1 Score: 313 bits (802), Expect = 2.270e-102 Identity = 148/211 (70.14%), Postives = 176/211 (83.41%), Query Frame = 1
Query: 1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQI 633
+G+SG++IQTQA K +EM V +F ASNGWL FL+R+G H+NLH +AG+V++A EK+IA IR+QL+GF+ E IFNMDETGLF RCFPR TYVT E AAGLN+KTARGSKAMK KDRC VVACCNTTGSLK PLAVI TAK+PMVFR+VRK PYY++ SAWLDS++ Q+WFD+VF PF K+ TGKKVALLWDNC GH IK+DDPQI
Sbjct: 203 LGLSGIMIQTQATKFAAEMNVTNFTASNGWLHRFLSRYGLVHINLHREAGEVNKAAAEKEIAQIREQLEGFEDELIFNMDETGLFHRCFPRGTYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYARKSAWLDSALCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQI 413
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE) HSP 1 Score: 302 bits (774), Expect = 4.360e-95 Identity = 164/321 (51.09%), Postives = 191/321 (59.50%), Query Frame = 1
Query: 1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRS--------------------------------------------------------------------------------------------TYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPY--YSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
+G+SG++IQTQA K +EM V +F ASNGWL F +R+G H+NLHG+AGDV++A EK+IA IR+QL+GFDVE IFNMDETGLF RCFPR TYVT E AAGLN+KTARGSKAMK KDRC VVACCNTTGSLK PLA+I TAK+PMVFR VRK PY Y+Q SAWLDS++ Q+WFD+VF PF K+ TGKK+ALLWDNC GH IK+DDPQI IIFLPPNVTSV+QPM
Sbjct: 244 LGLSGIMIQTQATKFAAEMNVTNFTASNGWLHRFFSRYGLVHINLHGEAGDVNKAAAEKEIAQIREQLEGFDVELIFNMDETGLFHRCFPRGMYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHXEGFDVELIFNMDETGLFYRCFXXXXXXXXXXXXXXXXXXPRGTYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHTAKDPMVFRQVRKPACPYLYYAQKSAWLDSALCQRWFDEVFVPFVKKTTGKKMALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPM 564
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JLK3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK3_9PHAE) HSP 1 Score: 278 bits (711), Expect = 1.030e-88 Identity = 143/227 (63.00%), Postives = 164/227 (72.25%), Query Frame = 1
Query: 1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
+G+SG++IQTQA K+ +EM V F ASNGWL FL+R+G H+NLHG+AGDV++A EKKIA IR+QL+GFDVE IFNMDETGLF RC A GLN+K ARGSKAMK KDRC VVACCNTTGSLK PLAVI TAK+PMVFR+ +WFD VF PF K+ TGKKVALLWDNC GH IK+DDPQI IIFLPPNV SV+QPM
Sbjct: 6 LGLSGIMIQTQAPKLAAEMNVTHFTASNGWLHRFLSRYGLVHINLHGEAGDVNKAAAEKKIAQIREQLEGFDVELIFNMDETGLFHRC---------SRGAPGLNQKNARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRH----------------------RWFDKVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVMSVFQPM 201
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5KFG9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG9_9PHAE) HSP 1 Score: 266 bits (679), Expect = 3.060e-84 Identity = 136/227 (59.91%), Postives = 160/227 (70.48%), Query Frame = 1
Query: 1 IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
IG+SG +IQ +A K SEMG+ ASNGWL L R H+NLHG+AGDVD+ K+++KIA +QL FDVEFIFNMDET LF+RCFPR TYVT E AAG+N+ TARGSKAMK PLAVI TA NPMVFR VR+ P PYY+Q SAWLD+S+ Q+WFD+VF PF K T +KV L WDNC GH I ++DPQI IIFLPP VTSV+QPM
Sbjct: 59 IGLSGTMIQHRAVKFASEMGIK-LAASNGWLHRSLKRCQLKHINLHGEAGDVDQEKVQEKIAQTEEQLNEFDVEFIFNMDETALFYRCFPRGTYVTRQEDAAGVNKNTARGSKAMKAXV----------------PLAVIGTAANPMVFRKVRELPCPYYAQASAWLDASLCQRWFDEVFVPFVKSKTARKVTLTWDNCPGHKIINNDPQIVIIFLPPLVTSVFQPM 268
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Match: A0A6H5JYC6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC6_9PHAE) HSP 1 Score: 266 bits (681), Expect = 5.250e-84 Identity = 131/179 (73.18%), Postives = 148/179 (82.68%), Query Frame = 1
Query: 145 AGDVDRAKMEKKIAAIRQQLKGFDVEFIFNMDETGLFFRCFPRSTYVTSDERAAGLNRKTARGSKAMKTKDRCMVVACCNTTGSLKGPLAVISTAKNPMVFRYVRKSPIPYYSQPSAWLDSSIFQQWFDDVFTPFGKQATGKKVALLWDNCLGHIIKSDDPQITIIFLPPNVTSVYQPM 681
AG R KIA R +L+GFDVE IFNMD+TGLF+RCFPR TYVT E AAG+N+KTARGSKAMK KD+C VVACCNTTGSLK PLAVI TAK+PMVFR+VRK P PYY+Q SAWLD+SI Q+WFD+VF PF K+ TGKKVALLW+NC GH IK+DDPQI IIFLPP VTSV+QPM
Sbjct: 267 AGLEARLNQWIKIARQRFELEGFDVELIFNMDQTGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDQCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKENTGKKVALLWNNCPGHEIKNDDPQIVIIFLPPKVTSVFQPM 445 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182905.4909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig182905.4909.1 >prot_H-elongata_contig182905.4909.1 ID=prot_H-elongata_contig182905.4909.1|Name=mRNA_H-elongata_contig182905.4909.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp IGISGVLIQTQAKKIDSEMGVADFKASNGWLQGFLTRFGFSHVNLHGQAGback to top mRNA from alignment at H-elongata_contig182905:343..1047- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig182905.4909.1 ID=mRNA_H-elongata_contig182905.4909.1|Name=mRNA_H-elongata_contig182905.4909.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=705bp|location=Sequence derived from alignment at H-elongata_contig182905:343..1047- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig182905:343..1047- >mRNA_H-elongata_contig182905.4909.1 ID=mRNA_H-elongata_contig182905.4909.1|Name=mRNA_H-elongata_contig182905.4909.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig182905:343..1047- (Himanthalia elongata Himel1 dioecious)back to top |