mRNA_H-elongata_contig182632.4898.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Match: A0A6H5JVG8_9PHAE (Glu_synthase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG8_9PHAE) HSP 1 Score: 141 bits (356), Expect = 7.420e-38 Identity = 70/83 (84.34%), Postives = 73/83 (87.95%), Query Frame = 1
Query: 1 CVGHADEVAALVAAMASKGPGHGPDFFTIDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLTGAGLRDRVKIICSGKVLRKF 249
CVG DEVAALV AM KGPGHGPDFFT+DGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLL GAGLR+ VK+ICSGKV F
Sbjct: 337 CVGQYDEVAALVGAMVEKGPGHGPDFFTVDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLREDVKVICSGKVTSGF 419
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Match: A0A0L0FI59_9EUKA (Glu_synthase domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FI59_9EUKA) HSP 1 Score: 106 bits (264), Expect = 1.380e-26 Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 1
Query: 1 CVGHADEVAALVAAMASKGPGHGPDFFTIDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLTGAGLRDRVKIICSGKVLRKF 249
CVG +E A+LVAAM PDF T+DG+EGGTGAAPPEFSNSVG PL+EGL V+D+LTGAG+RD+VKII +GKV+ F
Sbjct: 5 CVGRPEEFASLVAAMIKTNIA--PDFVTVDGTEGGTGAAPPEFSNSVGMPLIEGLTFVNDILTGAGIRDQVKIITAGKVISGF 85
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Match: A0A830HEV5_9CHLO (Glu_synthase domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HEV5_9CHLO) HSP 1 Score: 106 bits (264), Expect = 6.470e-25 Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 1
Query: 1 CVGHADEVAALVAAMASKGPGHGPDFFTIDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLTGAGLRDRVKIICSGKVLRKF 249
C+G+ +E ALV AM G H PDF TIDG EGGTGAAPPEFSN VG PL+EGLV+VD +L GAGLRD+V++ICSGK++ F
Sbjct: 391 CMGYGEEFMALVHAMVETGI-H-PDFVTIDGGEGGTGAAPPEFSNRVGAPLIEGLVIVDRVLVGAGLRDKVRVICSGKIVTGF 471
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Match: A0A835YM27_9STRA (Glu_synthase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM27_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.180e-24 Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 1 CVGHADEVAALVAAMASKGPGHGPDFFTIDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLTGAGLRDRVKIICSGKVLRKF 249
CVG+ E+A +V AM G G PDF IDG EGGTGAAPPEFSNSVGTPLV+ + L DLL GAG+R+RV +IC+GKVL F
Sbjct: 308 CVGNHVELAGIVRAMQESGSG--PDFINIDGGEGGTGAAPPEFSNSVGTPLVDAVALATDLLIGAGIRERVTVICAGKVLSGF 388
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Match: A0A1Y2D4Y5_9FUNG (FMN-linked oxidoreductase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2D4Y5_9FUNG) HSP 1 Score: 101 bits (252), Expect = 2.720e-23 Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 1 CVGHADEVAALVAAMASKGPGHGPDFFTIDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLTGAGLRDRVKIICSGKVLRKF 249
CVG DE+ AL+ AM S G PDF TIDG EGGTGAAP EFSNSVG P++EGL+LV+ LL GAG+R+ +KII SGK+L F
Sbjct: 393 CVGRVDELTALIHAMQSTGIK--PDFITIDGGEGGTGAAPVEFSNSVGMPMMEGLILVNGLLRGAGIREDIKIIVSGKILSAF 473
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Match: D7FI20_ECTSI (Ferredoxin-dependent glutamate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI20_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 2.340e-22 Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 85 IDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLTGAGLRDRVKIICSGKVLRKF 249
+ GSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLL GAGLRD VK+ICSGKV F
Sbjct: 1 MQGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLRGAGLRDDVKVICSGKVTSGF 55
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Match: A0A0G4FIN9_9ALVE (Glu_synthase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FIN9_9ALVE) HSP 1 Score: 97.4 bits (241), Expect = 8.310e-22 Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 1 CVGHADEVAALVAAMASKGPGHGPDFFTIDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLTGAGLRDRVKIICSGKVLRKF 249
CVG ++ +A+ AM G PDF T+DGSEGGTGAAPPEFS+SVG PL EGL LV+++LTG GLRD+++II SGK+L F
Sbjct: 364 CVGQPEDFSAICHAMIETGIR--PDFVTVDGSEGGTGAAPPEFSDSVGMPLQEGLNLVNNMLTGGGLRDKIRIIASGKILSGF 444
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Match: A0A0M0JJ35_9EUKA (Membrane protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JJ35_9EUKA) HSP 1 Score: 96.3 bits (238), Expect = 2.260e-21 Identity = 55/83 (66.27%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 1 CVGHADEVAALVAAMASKGPGHGPDFFTIDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLTGAGLRDRVKIICSGKVLRKF 249
CVG EVAALV AM G PDF TIDG+EGGTGAAP EF NS+G PL EGL LV+ LLTGAGLR VK+I SGKV F
Sbjct: 1265 CVGQPAEVAALVHAMLDTGIT--PDFITIDGAEGGTGAAPLEFQNSIGFPLAEGLRLVNSLLTGAGLRKEVKLIASGKVYDGF 1345
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Match: A0A0G4J4Y0_PLABS (Glu_synthase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J4Y0_PLABS) HSP 1 Score: 94.7 bits (234), Expect = 7.390e-21 Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 1 CVGHADEVAALVAAMASKGPGHGPDFFTIDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLTGAGLRDRVKIICSGKVLRKF 249
C+G DE ++ A A + G PDF T+DG EGGTGAAPPEFS+ VGTPLVEGL VD++L GA LR R+KII SGKVL F
Sbjct: 365 CIGRFDEF--IMLAHAFQETGIVPDFITVDGGEGGTGAAPPEFSDRVGTPLVEGLRFVDNVLIGADLRHRIKIIASGKVLTGF 445
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Match: A0A7S3ZZJ7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZJ7_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 7.600e-21 Identity = 49/83 (59.04%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 1 CVGHADEVAALVAAMASKGPGHGPDFFTIDGSEGGTGAAPPEFSNSVGTPLVEGLVLVDDLLTGAGLRDRVKIICSGKVLRKF 249
CVG E AAL AM PDF T+DG+EGGTGAAPPEF +S+G PL EGL +VD LTGAGLRD VK+I +GK+ F
Sbjct: 405 CVGQPHEFAALCHAMLDANVA--PDFVTVDGTEGGTGAAPPEFQDSIGMPLAEGLRIVDGFLTGAGLRDEVKVIAAGKIYNGF 485 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182632.4898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig182632.4898.1 >prot_H-elongata_contig182632.4898.1 ID=prot_H-elongata_contig182632.4898.1|Name=mRNA_H-elongata_contig182632.4898.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp CVGHADEVAALVAAMASKGPGHGPDFFTIDGSEGGTGAAPPEFSNSVGTPback to top mRNA from alignment at H-elongata_contig182632:447..1110+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig182632.4898.1 ID=mRNA_H-elongata_contig182632.4898.1|Name=mRNA_H-elongata_contig182632.4898.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=664bp|location=Sequence derived from alignment at H-elongata_contig182632:447..1110+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig182632:447..1110+ >mRNA_H-elongata_contig182632.4898.1 ID=mRNA_H-elongata_contig182632.4898.1|Name=mRNA_H-elongata_contig182632.4898.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=498bp|location=Sequence derived from alignment at H-elongata_contig182632:447..1110+ (Himanthalia elongata Himel1 dioecious)back to top |