prot_H-elongata_contig182431.4892.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig182431.4892.1
Unique Nameprot_H-elongata_contig182431.4892.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length41
Homology
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Match: D7G2M8_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M8_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 7.420e-15
Identity = 31/38 (81.58%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 QAGGCCDCGDPDAWDPSGFCRSHGLDNLDPLKELPPGI 38
            QAGGCCDCGDPDAWD  GFCR HGLDN DPL ELP G+
Sbjct:  256 QAGGCCDCGDPDAWDYRGFCRHHGLDNRDPLLELPQGL 293          
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Match: A0A6H5JTE4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTE4_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 4.830e-14
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 QAGGCCDCGDPDAWDPSGFCRSHGLDNLDPLKELPPGI 38
            QAGGCCDCGDPDAWD  GFC  HGLDN DPL+ELP G+
Sbjct:  257 QAGGCCDCGDPDAWDYRGFCPHHGLDNGDPLQELPQGL 294          
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Match: W7U0V5_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.400e-11
Identity = 26/38 (68.42%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    1 QAGGCCDCGDPDAWDPSGFCRSHGLDNLDPLKELPPGI 38
            QAGGCCDCGD DAWD +GFC  HG D  DPL  LPP  
Sbjct:  298 QAGGCCDCGDDDAWDKAGFCPRHGQDGNDPLSHLPPSF 335          
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Match: A0A5D6XUK7_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUK7_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 7.750e-10
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    1 QAGGCCDCGDPDAWDPSGFCRSH-GLDNLDPLKELPPGIYI 40
            Q+GGCCDCGD +AW P GFC SH G  + DPL+ LPP I +
Sbjct:  185 QSGGCCDCGDTEAWAPEGFCTSHKGAQDADPLRLLPPDILV 225          
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Match: A0A7S0TMJ5_HEMAN (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TMJ5_HEMAN)

HSP 1 Score: 57.8 bits (138), Expect = 1.700e-9
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    2 AGGCCDCGDPDAWDPSGFCRSH-GLDNLDPLKELPP 36
            AGGCCDCGD +AWDPSGFC+ H G  + DPL  +PP
Sbjct:   18 AGGCCDCGDHEAWDPSGFCKRHSGPSDEDPLAAMPP 53          
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Match: A0A8K1C667_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C667_PYTOL)

HSP 1 Score: 60.1 bits (144), Expect = 1.980e-9
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    1 QAGGCCDCGDPDAWDPSGFCRSH-GLDNLDPLKELPPGIYI 40
             +GGCCDCGDP+AW P GFC  H G  ++DPL   PPG+ I
Sbjct:  147 HSGGCCDCGDPEAWAPEGFCTHHRGAQDVDPLLFYPPGLVI 187          
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Match: A0A7S2DRZ5_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRZ5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.950e-9
Identity = 24/35 (68.57%), Postives = 25/35 (71.43%), Query Frame = 0
Query:    1 QAGGCCDCGDPDAWDPSGFCRSHGLDNLDPLKELP 35
            QAGGCCDCGDPDAW   GFC +HG    DPL  LP
Sbjct:   58 QAGGCCDCGDPDAWAADGFCTAHGHALSDPLATLP 92          
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Match: A0A7S1H8G3_HEMAN (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H8G3_HEMAN)

HSP 1 Score: 57.8 bits (138), Expect = 4.640e-9
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    2 AGGCCDCGDPDAWDPSGFCRSH-GLDNLDPLKELPP 36
            AGGCCDCGD +AWDPSGFC+ H G  + DPL  +PP
Sbjct:  134 AGGCCDCGDHEAWDPSGFCKRHSGPSDEDPLAAMPP 169          
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Match: A0A7R9VHK1_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VHK1_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.950e-9
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0
Query:    1 QAGGCCDCGDPDAWDPSGFCRSHGLD 26
            QAGGCCDCGDPDAWDP+GFC  HG+D
Sbjct:  178 QAGGCCDCGDPDAWDPAGFCPRHGVD 203          
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Match: A0A2R5G4R1_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4R1_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.290e-8
Identity = 24/39 (61.54%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    1 QAGGCCDCGDPDAWDPSGFCRSHGLDNL-DPLKELPPGI 38
             AGGCCDCGDP AWDPSGFC  HG  N+ +P   LP  +
Sbjct:  208 DAGGCCDCGDPGAWDPSGFCNKHGESNVPEPKNWLPAAM 246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182431.4892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2M8_ECTSI7.420e-1581.58E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A6H5JTE4_9PHAE4.830e-1478.95E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
W7U0V5_9STRA3.400e-1168.42E3 ubiquitin-protein ligase n=2 Tax=Monodopsidacea... [more]
A0A5D6XUK7_9STRA7.750e-1060.98E3 ubiquitin-protein ligase n=1 Tax=Pythium brassi... [more]
A0A7S0TMJ5_HEMAN1.700e-966.67E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Hem... [more]
A0A8K1C667_PYTOL1.980e-958.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2DRZ5_9STRA2.950e-968.57E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dic... [more]
A0A7S1H8G3_HEMAN4.640e-966.67E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Hem... [more]
A0A7R9VHK1_9STRA4.950e-984.62E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pse... [more]
A0A2R5G4R1_9STRA1.290e-861.54E3 ubiquitin-protein ligase n=1 Tax=Hondaea fermen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.110.30coord: 1..25
e-value: 2.3E-5
score: 26.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig182431contigH-elongata_contig182431:65..187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig182431.4892.1mRNA_H-elongata_contig182431.4892.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig182431 65..187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig182431.4892.1 ID=prot_H-elongata_contig182431.4892.1|Name=mRNA_H-elongata_contig182431.4892.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp
QAGGCCDCGDPDAWDPSGFCRSHGLDNLDPLKELPPGIYI*
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