prot_H-elongata_contig18126.4846.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18126.4846.1
Unique Nameprot_H-elongata_contig18126.4846.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: D8LRD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD0_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 5.140e-44
Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    1 MSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQ 106
            MSTVTA+TVRTLLSSGVVIMFP+VMLLE +GL GV+++QMLALSYPWLG+PIEHLR+ NKP+G FIMGH+MQ     M VFY+VYNACLLAWS WLY KTM T LQ
Sbjct:   59 MSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQ-----MVVFYTVYNACLLAWSYWLYGKTMTTSLQ 159          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A6H5JH19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.700e-41
Identity = 81/109 (74.31%), Postives = 93/109 (85.32%), Query Frame = 0
Query:    1 MSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQAKL 109
            MSTVTA+TVRTLLSSGVVI+FP+VMLLE +GL GV+++QMLALSYPWLG+PIEHLR+ NKP+G FIMGH+MQ     M VFY+VYNACLLAWS WLY KTM T LQ  L
Sbjct:  423 MSTVTALTVRTLLSSGVVIIFPVVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHVMQ-----MVVFYTVYNACLLAWSYWLYGKTMTTSLQVWL 526          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S2AJJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJJ9_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.460e-22
Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 0
Query:    2 STVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQ 106
            STVTA+ VR L+SSGVVIMFPL+  L  LG   +++ Q+L +SYPWLG+P+E LR+ NKP+   I+ H++     R+ V YS+Y AC LAW  WLY K +P+ L+
Sbjct:   69 STVTALIVRMLISSGVVIMFPLLTGLRYLGCSAIDM-QILNMSYPWLGLPVERLRAQNKPVTPLIVAHMV-----RVVVLYSMYEACQLAWGIWLYDKPLPSGLE 167          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S3Y6C3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C3_HETAK)

HSP 1 Score: 96.7 bits (239), Expect = 9.680e-22
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 0
Query:    1 MSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQAKL 109
            MS+VTA+ VR L+SSGVV MFPL   LE  GL G   R +L LSYPWLG P+E L+   KP G F+ GHL+     ++ V+Y++Y A  +AW+ WLY K+ P  L+  L
Sbjct:   75 MSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFNQR-LLRLSYPWLGAPMEELQRRGKPTGPFVAGHLL-----KVVVYYALYEAAQVAWAQWLYGKSTPAGLEVWL 177          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S4DCY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK)

HSP 1 Score: 96.7 bits (239), Expect = 4.460e-21
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 0
Query:    1 MSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQAKL 109
            MS+VTA+ VR L+SSGVV MFPL   LE  GL G   R +L LSYPWLG P+E L+   KP G F+ GHL+     ++ V+Y++Y A  +AW+ WLY K+ P  L+  L
Sbjct:  263 MSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFNQR-LLRLSYPWLGAPMEELQRRGKPTGPFVAGHLL-----KVVVYYALYEAAQVAWAQWLYGKSTPAGLEVWL 365          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A835YR56_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR56_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.480e-19
Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    1 MSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKT 100
            +S+VTA+ VR LLSSGV  MFP   LL  +G   ++ R +LA SYPW+G P++ LR  NKP G FIM HL+Q     + V+Y++YNA  +AW+ WLY K+
Sbjct:   23 LSSVTALVVRMLLSSGVAAMFPFFALLRRMGFTDLDDR-VLAASYPWIGRPMQALRRQNKPTGPFIMAHLVQ-----VVVYYTLYNAVQVAWTMWLYDKS 116          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S2SN08_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SN08_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.820e-15
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    2 STVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 102
            S +TA+ VR L++SGV I FPL  L + LGL     RQ+L+LSYPWLG  IE L ++N+     +  HL       + ++Y++Y AC + WS WLY K+MP
Sbjct:  269 SQITALLVRVLVTSGVAITFPLFNLFQRLGL-NQHRRQLLSLSYPWLGAQIELLHTSNQSSNPLVSAHLFN-----VLLYYTMYEACQIVWSFWLYNKSMP 363          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S0XCD7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCD7_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 8.300e-15
Identity = 44/102 (43.14%), Postives = 68/102 (66.67%), Query Frame = 0
Query:    1 MSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 102
            +ST++A+ VR L+SSGVV++FPL  +++     G+  R +++LSYPW+G+PIE LRS N+ I  FI+ H+      R+ V+Y +Y A  LA+S W Y  + P
Sbjct:  155 LSTISALLVRILISSGVVLLFPLFWIVQRFTSHGISWR-IISLSYPWIGIPIEVLRSRNQSIEPFIIAHIC-----RIVVYYVLYEAAQLAFSVWFYNDSRP 250          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: F0YGC8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGC8_AURAN)

HSP 1 Score: 66.6 bits (161), Expect = 1.870e-10
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 0
Query:    1 MSTVTAMTVRTLLSSGVVIMFPLVMLLESLGL---WGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 102
            MST+TA+ +R L+SSGVV  F L   L S G    +G      L+LSYPWLG P+E LR+  +P   F+  H++     R+ + Y+ Y AC +A+S W Y    P
Sbjct:  264 MSTITALVIRVLVSSGVVAAFLLWYGLTSCGARLDFGA-----LSLSYPWLGAPLELLRAQRRPACPFVASHVV-----RVVLLYAAYEACQVAFSDWFYLGQRP 358          
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S4VIQ3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VIQ3_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.630e-9
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 0
Query:    4 VTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 102
            VTA+ VR L +SGVVIMFPL     + GL G + R +L LSY W+G      R+     G     HL+ A   ++F++Y++Y AC  AWS  LY K++P
Sbjct:  627 VTALIVRVLTTSGVVIMFPLFACFRACGLPGADDR-ILNLSYSWIG----RARNAIDRRGIHTSWHLIAAHMAKIFLYYAMYEACQAAWSVVLYTKSVP 720          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LRD0_ECTSI5.140e-4476.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH19_9PHAE1.700e-4174.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2AJJ9_9STRA1.460e-2251.43Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3Y6C3_HETAK9.680e-2249.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DCY7_HETAK4.460e-2149.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YR56_9STRA5.480e-1950.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2SN08_9STRA1.820e-1544.55Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S0XCD7_9STRA8.300e-1543.14Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
F0YGC8_AURAN1.870e-1040.95Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4VIQ3_9STRA1.630e-942.42Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..113
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 79..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18126contigH-elongata_contig18126:744..2613 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18126.4846.1mRNA_H-elongata_contig18126.4846.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18126 84..2745 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18126.4846.1 ID=prot_H-elongata_contig18126.4846.1|Name=mRNA_H-elongata_contig18126.4846.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
MSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGV
PIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKT
MPTILQAKLLLIE*
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