mRNA_H-elongata_contig18126.4846.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: D8LRD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD0_ECTSI) HSP 1 Score: 196 bits (498), Expect = 2.970e-57 Identity = 104/150 (69.33%), Postives = 124/150 (82.67%), Query Frame = 1
Query: 1 KQTEADWIWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQ 450
K+T +W+WSRDP P+ S L R+L V FK QV++RS+ +FVLMSTVTA+TVRTLLSSGVVIMFP+VMLLE +GL GV+++QMLALSYPWLG+PIEHLR+ NKP+G FIMGH+MQ M VFY+VYNACLLAWS WLY KTM T LQ
Sbjct: 17 KKTGGEWMWSRDPDPS--SGLMRVLSAVAFKSQVLVRSLVAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQ-----MVVFYTVYNACLLAWSYWLYGKTMTTSLQ 159
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A6H5JH19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE) HSP 1 Score: 189 bits (479), Expect = 7.650e-52 Identity = 102/152 (67.11%), Postives = 123/152 (80.92%), Query Frame = 1
Query: 4 QTEADWIWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQAKL 459
+T +W+WSRD P+ S L R+L V FK QVV+RS+ +F+LMSTVTA+TVRTLLSSGVVI+FP+VMLLE +GL GV+++QMLALSYPWLG+PIEHLR+ NKP+G FIMGH+MQ M VFY+VYNACLLAWS WLY KTM T LQ L
Sbjct: 382 KTGGEWMWSRDSDPS--SGLMRVLSAVAFKSQVVVRSLMAFLLMSTVTALTVRTLLSSGVVIIFPVVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHVMQ-----MVVFYTVYNACLLAWSYWLYGKTMTTSLQVWL 526
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S3Y6C3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C3_HETAK) HSP 1 Score: 108 bits (270), Expect = 1.790e-24 Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 7 TEADWIWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQAKL 459
T+ +W W + P P LL R+ K ++ S+ +F LMS+VTA+ VR L+SSGVV MFPL LE GL G R +L LSYPWLG P+E L+ KP G F+ GHL+ ++ V+Y++Y A +AW+ WLY K+ P L+ L
Sbjct: 35 TKEEWSWGKGELP-PAGGYSPLL-RLALKPLALLSSLLAFFLMSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFNQR-LLRLSYPWLGAPMEELQRRGKPTGPFVAGHLL-----KVVVYYALYEAAQVAWAQWLYGKSTPAGLEVWL 177
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S2AJJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJJ9_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.050e-24 Identity = 64/148 (43.24%), Postives = 91/148 (61.49%), Query Frame = 1
Query: 7 TEADWIWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQ 450
T+ W W+ +L + K VV+RS+ +F STVTA+ VR L+SSGVVIMFPL+ L LG +++ Q+L +SYPWLG+P+E LR+ NKP+ I+ H++ R+ V YS+Y AC LAW WLY K +P+ L+
Sbjct: 26 TKEAWSWTESTLALGYQNKRGVLEYLKAKAIVVLRSLLAFFFTSTVTALIVRMLISSGVVIMFPLLTGLRYLGCSAIDM-QILNMSYPWLGLPVERLRAQNKPVTPLIVAHMV-----RVVVLYSMYEACQLAWGIWLYDKPLPSGLE 167
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S4DCY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK) HSP 1 Score: 108 bits (270), Expect = 1.470e-23 Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 7 TEADWIWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMPTILQAKL 459
T+ +W W + P P LL R+ K ++ S+ +F LMS+VTA+ VR L+SSGVV MFPL LE GL G R +L LSYPWLG P+E L+ KP G F+ GHL+ ++ V+Y++Y A +AW+ WLY K+ P L+ L
Sbjct: 223 TKEEWSWGKGELP-PAGGYSPLL-RLALKPLALLSSLLAFFLMSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFNQR-LLRLSYPWLGAPMEELQRRGKPTGPFVAGHLL-----KVVVYYALYEAAQVAWAQWLYGKSTPAGLEVWL 365
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A835YR56_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR56_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 6.310e-19 Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 109 RSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKT 432
R++ +F ++S+VTA+ VR LLSSGV MFP LL +G ++ R +LA SYPW+G P++ LR NKP G FIM HL+Q + V+Y++YNA +AW+ WLY K+
Sbjct: 15 RALLTFAVLSSVTALVVRMLLSSGVAAMFPFFALLRRMGFTDLDDR-VLAASYPWIGRPMQALRRQNKPTGPFIMAHLVQ-----VVVYYTLYNAVQVAWTMWLYDKS 116
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S2SN08_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SN08_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 9.430e-17 Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 22 IWSRDPKPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 438
IWS D + L + + K+ SI SF L+S +TA+ VR L++SGV I FPL L + LGL RQ+L+LSYPWLG IE L ++N+ + HL + ++Y++Y AC + WS WLY K+MP
Sbjct: 232 IWSWDKRDFDYLNYG-LFRKAVRKLAAFFMSILSFALVSQITALLVRVLVTSGVAITFPLFNLFQRLGL-NQHRRQLLSLSYPWLGAQIELLHTSNQSSNPLVSAHLFN-----VLLYYTMYEACQIVWSFWLYNKSMP 363
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S0XCD7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCD7_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 9.660e-16 Identity = 49/119 (41.18%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 82 VIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 438
+ F++ V+ S SF ++ST++A+ VR L+SSGVV++FPL +++ G+ R +++LSYPW+G+PIE LRS N+ I FI+ H+ R+ V+Y +Y A LA+S W Y + P
Sbjct: 138 ITFRLMVLFVSFFSFFMLSTISALLVRILISSGVVLLFPLFWIVQRFTSHGISWR-IISLSYPWIGIPIEVLRSRNQSIEPFIIAHIC-----RIVVYYVLYEAAQLAFSVWFYNDSRP 250
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: F0YGC8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGC8_AURAN) HSP 1 Score: 73.2 bits (178), Expect = 3.600e-11 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 85 IFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGL---WGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 438
+F+ V +S+ +F MST+TA+ +R L+SSGVV F L L S G +G L+LSYPWLG P+E LR+ +P F+ H++ R+ + Y+ Y AC +A+S W Y P
Sbjct: 248 VFRFGVAAKSLIAFFFMSTITALVIRVLVSSGVVAAFLLWYGLTSCGARLDFGA-----LSLSYPWLGAPLELLRAQRRPACPFVASHVV-----RVVLLYAAYEACQVAFSDWFYLGQRP 358
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Match: A0A7S4VIQ3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VIQ3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.560e-10 Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 4 QTEADWIWSRDP-KPAPLSRLERLLWRVIFKIQVVIRSITSFVLMSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVPIEHLRSNNKPIGSFIMGHLMQARDERMFVFYSVYNACLLAWSSWLYAKTMP 438
+T+ W W +D +P + + KI + +I SF L+ +VTA+ VR L +SGVVIMFPL + GL G + R +L LSY W+G R+ G HL+ A ++F++Y++Y AC AWS LY K++P
Sbjct: 580 KTKERWSWRKDLLEPTWKEEGSFFTYWCLSKIGNLALAILSFFLIMSVTALIVRVLTTSGVVIMFPLFACFRACGLPGADDR-ILNLSYSWIG----RARNAIDRRGIHTSWHLIAAHMAKIFLYYAMYEACQAAWSVVLYTKSVP 720 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18126.4846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18126.4846.1 >prot_H-elongata_contig18126.4846.1 ID=prot_H-elongata_contig18126.4846.1|Name=mRNA_H-elongata_contig18126.4846.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp MSTVTAMTVRTLLSSGVVIMFPLVMLLESLGLWGVELRQMLALSYPWLGVback to top mRNA from alignment at H-elongata_contig18126:84..2745- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18126.4846.1 ID=mRNA_H-elongata_contig18126.4846.1|Name=mRNA_H-elongata_contig18126.4846.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2662bp|location=Sequence derived from alignment at H-elongata_contig18126:84..2745- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18126:84..2745- >mRNA_H-elongata_contig18126.4846.1 ID=mRNA_H-elongata_contig18126.4846.1|Name=mRNA_H-elongata_contig18126.4846.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig18126:84..2745- (Himanthalia elongata Himel1 dioecious)back to top |