prot_H-elongata_contig180478.4805.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5L663_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L663_9PHAE) HSP 1 Score: 116 bits (291), Expect = 5.440e-29 Identity = 51/132 (38.64%), Postives = 88/132 (66.67%), Query Frame = 0
Query: 1 MVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL 132
MV+G ++V ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD+E G L I+ + ++M+ ++ + + S IPASPG+DLGP+ + GG + +GS+MW+S +RPD++ A+
Sbjct: 57 MVDGVVVMIVVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDFEAGTLRISHAAYIDSMVKRFDVQSASRIPASPGVDLGPKRDDMKGGE---WPVKEAIGSMMWVSTFSRPDVSLAV 185
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.110e-27 Identity = 51/132 (38.64%), Postives = 89/132 (67.42%), Query Frame = 0
Query: 1 MVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL 132
MV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP ++ G+ + + GCA ERD E G L+I+Q + ++M+ ++ + + S IPASPG+DLGP+ + E GG R +GS+MW+S +RPD++ A+
Sbjct: 651 MVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDNENGGE---WPVREAIGSMMWVSTFSRPDVSFAV 779
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE) HSP 1 Score: 115 bits (288), Expect = 2.840e-27 Identity = 53/132 (40.15%), Postives = 86/132 (65.15%), Query Frame = 0
Query: 1 MVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL 132
MV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD E G L I+Q + ++M+ ++ + + S IPA+PG DLGP E E GG R +GS+MWMS +RPD++ A+
Sbjct: 807 MVDEVVVMIIVIYADDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPGADLGPIREDEEGGE---WPVREAIGSMMWMSTFSRPDVSFAV 935
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 115 bits (287), Expect = 3.760e-27 Identity = 51/132 (38.64%), Postives = 87/132 (65.91%), Query Frame = 0
Query: 1 MVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL 132
MV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP K+ + + + GCA ERD E G L I+Q + ++M+ ++ + + S IPASPG+DLGP+ + E GG R +GS+MW+S +RPD++ A+
Sbjct: 475 MVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE---WPVREAIGSIMWVSTFSRPDVSFAV 603
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5KYI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI5_9PHAE) HSP 1 Score: 115 bits (287), Expect = 3.890e-27 Identity = 51/132 (38.64%), Postives = 87/132 (65.91%), Query Frame = 0
Query: 1 MVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL 132
MV+ +++ ++ DD++V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD E G L I+Q + ++M+ ++ + S IPASPG+DLGP+ + E GG R +GS+MW+S +RPD++ A+
Sbjct: 878 MVDEVVVMIIAIYVDDLLVAGSDEDCEELLASLNKKFPPKYLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLIRFDEQSTSRIPASPGVDLGPKRDDEKGGE---WSVREAIGSMMWVSTFSRPDVSFAV 1006
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE) HSP 1 Score: 114 bits (286), Expect = 5.180e-27 Identity = 51/132 (38.64%), Postives = 87/132 (65.91%), Query Frame = 0
Query: 1 MVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL 132
MV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD + G L I+Q + ++M+ ++ + + S IPA+PG DLGP+ E + GG R VGS+MW+S +RPD++ A+
Sbjct: 512 MVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGE---WPVREAVGSMMWVSTFSRPDVSFAV 640
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5K616_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K616_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.460e-26 Identity = 49/125 (39.20%), Postives = 83/125 (66.40%), Query Frame = 0
Query: 8 LMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL 132
+++ ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ER E G L I+Q + ++M+ ++ + S IPASPG+DLGP+ + E GG R +GS+MW+S +RPD++ A+
Sbjct: 109 MIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERGVEAGTLRISQTAYIDSMVKRFEAQSTSLIPASPGVDLGPKRDDENGGE---WPVREAIGSMMWVSTFSRPDVSFAV 230
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE) HSP 1 Score: 113 bits (282), Expect = 1.800e-26 Identity = 51/132 (38.64%), Postives = 85/132 (64.39%), Query Frame = 0
Query: 1 MVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL 132
MV+ +++ +H DDI+V+G ++ C+E L+ KRFP K+ G+ + + GCA ERD + G L+I+Q + ++M+ ++ + S IPASPG+DLGP+ + E G R +GS+MW+S +RPD+ A+
Sbjct: 491 MVDEVVVMIIVIHVDDILVAGSDEDCEELLASFNKRFPSKNLGECEWFDGCAIERDVDAGALKISQTAYIDSMVKRFDVQWTSRIPASPGVDLGPKRDDEKAGE---WPVRETIGSMMWVSTFSRPDVLFAV 619
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5K123_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K123_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.930e-26 Identity = 49/131 (37.40%), Postives = 83/131 (63.36%), Query Frame = 0
Query: 1 MVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANA 131
MV+ +++ ++ D I+V G ++ C E L+ L K+FP K+ G+ + + CA +RD E G L I++ + ++M+ ++ + + S IPASPG+DLGPR + E GG R +GS+MW+S +RPD++ A
Sbjct: 1 MVDEVVVMIIVIYVDIILVDGSDEDCKELLASLNKKFPTKNLGECEWFDRCAIDRDVEAGTLNISETAYIDSMVKRFDVQSTSRIPASPGIDLGPRRDDEKGGE---WPVREAIGSMMWVSAFSRPDVSFA 128
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5JVN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN4_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.590e-25 Identity = 53/134 (39.55%), Postives = 85/134 (63.43%), Query Frame = 0
Query: 2 VNGKF---SLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL 132
VNG S + ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD E G L I+Q + ++M+ ++ + + IPA+PG DLGP+ E E GG R +GS+MW+S +RPD++ A+
Sbjct: 626 VNGLMGVPSRXIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDMHSTPLIPATPGADLGPKREDEEGGE---WPVREAIGSMMWVSTFSRPDVSFAV 756 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig180478.4805.1 ID=prot_H-elongata_contig180478.4805.1|Name=mRNA_H-elongata_contig180478.4805.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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