mRNA_H-elongata_contig180478.4805.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 286 bits (732), Expect = 2.980e-89 Identity = 145/326 (44.48%), Postives = 210/326 (64.42%), Query Frame = 1
Query: 1 IFRKMVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL*VCVCHSHNPTARHW*ALLRIAAYVNATKEIGLRFVRGSGLSLPVFADADYAAASNDRRSVSGLAVLLGDTAISWKSSTQKCVTTATCEAEYVALCDAAKEAIFERAFLVFLQPQLAGVCVGIFGDNEGAIAIANNPSSASRNKHFDVKFHFIQGLVRSGDIRILNVGTKDQHVDILTKALWRKKFMVHR 978
+FRKM + D I+V+G +D C E L+ L K FP K G+ + GCA ERD E G L I+Q + ++++ ++ + + S+IPASPG+D+GP+ + E+GG R +GS+MW+S +RPDI+ A+ H+H P RHW A+++I AY+ T+++G+ + RGSGL L V+ DA YA A DRRSVSGLA +G T IS S TQ V+ ++ EAEY+A + KEA+F RA L F+ P+ +G + + DN+GA+A+ NP S++R+KH DV++HFI+GL RSGDI I V T +QH D+LTKAL + HR
Sbjct: 180 VFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGE---WPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAE-DRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHR 501
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE) HSP 1 Score: 289 bits (740), Expect = 2.310e-88 Identity = 142/326 (43.56%), Postives = 212/326 (65.03%), Query Frame = 1
Query: 1 IFRKMVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL*VCVCHSHNPTARHW*ALLRIAAYVNATKEIGLRFVRGSGLSLPVFADADYAAASNDRRSVSGLAVLLGDTAISWKSSTQKCVTTATCEAEYVALCDAAKEAIFERAFLVFLQPQLAGVCVGIFGDNEGAIAIANNPSSASRNKHFDVKFHFIQGLVRSGDIRILNVGTKDQHVDILTKALWRKKFMVHR 978
+FRKMV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD E G L I+Q + ++M+ ++ + + S IPA+PG DLGP+ E E GG R +GS+MW+S +RPD++ A+ H+H P RHW A+ +I Y+ T+++G+ + RGSGL L V+ DA YA + DRRSVSGLA +G T +S S TQ V+ ++ EAEY+A + KEA+F RA L+F+ P+ G + + DN+GA+A+ NP S+ R H DV+FHFI+GL SGDI + V T +QH D+LTKAL + HR
Sbjct: 428 VFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVARFDVQSTSRIPATPGADLGPKREDEEGGE---WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSMEAEYIAAGEGVKEALFVRAVLLFVAPETRGSSIQVLEDNQGAMALVQNPLSSGRTTHIDVRFHFIRGLFGSGDISVKFVPTTEQHADLLTKALRKASLQYHR 749
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 294 bits (753), Expect = 2.680e-87 Identity = 145/326 (44.48%), Postives = 214/326 (65.64%), Query Frame = 1
Query: 1 IFRKMVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL*VCVCHSHNPTARHW*ALLRIAAYVNATKEIGLRFVRGSGLSLPVFADADYAAASNDRRSVSGLAVLLGDTAISWKSSTQKCVTTATCEAEYVALCDAAKEAIFERAFLVFLQPQLAGVCVGIFGDNEGAIAIANNPSSASRNKHFDVKFHFIQGLVRSGDIRILNVGTKDQHVDILTKALWRKKFMVHR 978
+FRKMV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD E G L I+Q + ++M+ ++ + + S IPA+PG DLGP+ E E GG R +GS+MW+S +RPD++ A+ H+H P RHW A+ +I Y+ T+++G+ + RGSGL L V+ DA YA + DRRSVSGLA +G T +S S TQ V+ ++ EAEY+A + KEA+F RA L F+ P+ +G + + DN+GAIA+ NP S+ R KH DV++HFI+GL RSGDI + V T +QH D+LTKAL R HR
Sbjct: 917 VFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE---WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHR 1238
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 294 bits (753), Expect = 1.120e-86 Identity = 145/326 (44.48%), Postives = 214/326 (65.64%), Query Frame = 1
Query: 1 IFRKMVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL*VCVCHSHNPTARHW*ALLRIAAYVNATKEIGLRFVRGSGLSLPVFADADYAAASNDRRSVSGLAVLLGDTAISWKSSTQKCVTTATCEAEYVALCDAAKEAIFERAFLVFLQPQLAGVCVGIFGDNEGAIAIANNPSSASRNKHFDVKFHFIQGLVRSGDIRILNVGTKDQHVDILTKALWRKKFMVHR 978
+FRKMV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD E G L I+Q + ++M+ ++ + + S IPA+PG DLGP+ E E GG R +GS+MW+S +RPD++ A+ H+H P RHW A+ +I Y+ T+++G+ + RGSGL L V+ DA YA + DRRSVSGLA +G T +S S TQ V+ ++ EAEY+A + KEA+F RA L F+ P+ +G + + DN+GAIA+ NP S+ R KH DV++HFI+GL RSGDI + V T +QH D+LTKAL R HR
Sbjct: 1296 VFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE---WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHR 1617
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 294 bits (753), Expect = 1.220e-86 Identity = 145/326 (44.48%), Postives = 214/326 (65.64%), Query Frame = 1
Query: 1 IFRKMVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL*VCVCHSHNPTARHW*ALLRIAAYVNATKEIGLRFVRGSGLSLPVFADADYAAASNDRRSVSGLAVLLGDTAISWKSSTQKCVTTATCEAEYVALCDAAKEAIFERAFLVFLQPQLAGVCVGIFGDNEGAIAIANNPSSASRNKHFDVKFHFIQGLVRSGDIRILNVGTKDQHVDILTKALWRKKFMVHR 978
+FRKMV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD E G L I+Q + ++M+ ++ + + S IPA+PG DLGP+ E E GG R +GS+MW+S +RPD++ A+ H+H P RHW A+ +I Y+ T+++G+ + RGSGL L V+ DA YA + DRRSVSGLA +G T +S S TQ V+ ++ EAEY+A + KEA+F RA L F+ P+ +G + + DN+GAIA+ NP S+ R KH DV++HFI+GL RSGDI + V T +QH D+LTKAL R HR
Sbjct: 1459 VFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE---WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHR 1780
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 290 bits (743), Expect = 2.610e-85 Identity = 143/319 (44.83%), Postives = 212/319 (66.46%), Query Frame = 1
Query: 1 IFRKMVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL*VCVCHSHNPTARHW*ALLRIAAYVNATKEIGLRFVRGSGLSLPVFADADYAAASNDRRSVSGLAVLLGDTAISWKSSTQKCVTTATCEAEYVALCDAAKEAIFERAFLVFLQPQLAGVCVGIFGDNEGAIAIANNPSSASRNKHFDVKFHFIQGLVRSGDIRILNVGTKDQHVDILTKALWR 957
+FRKMV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD E G L I+Q + ++M+ ++ + + S IPA+PG DLGP+ E E GG R +GS+MW+S +RPD++ A+ H+H P RHW A+ +I Y+ T+++G+ + RGSGL L V+ DA YA + DRRSVSGLA +G T +S S TQ V+ ++ EAEY+A + KEA+F RA L F+ P+ +G + + DN+GAIA+ NP S+ R KH DV++HFI+GL RSGDI + V T +QH D+LTKAL R
Sbjct: 1316 VFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE---WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSR 1630
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE) HSP 1 Score: 280 bits (715), Expect = 4.790e-84 Identity = 140/326 (42.94%), Postives = 209/326 (64.11%), Query Frame = 1
Query: 1 IFRKMVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL*VCVCHSHNPTARHW*ALLRIAAYVNATKEIGLRFVRGSGLSLPVFADADYAAASNDRRSVSGLAVLLGDTAISWKSSTQKCVTTATCEAEYVALCDAAKEAIFERAFLVFLQPQLAGVCVGIFGDNEGAIAIANNPSSASRNKHFDVKFHFIQGLVRSGDIRILNVGTKDQHVDILTKALWRKKFMVHR 978
+FRKMV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD + G L I+Q + ++M+ ++ + + S IPA+PG DLGP+ E + GG R VGS+MW+S +RPD++ A+ H+H P RHW A+ +I Y+ T+++G+ + RGSGL L V+ DA YA + DRRSVS LA +G T +S S + V+ ++ EAEY+A + KEA+F RA L F+ P+ G + + DN+GAIA+ NP S+ KH DV+FHFI+GL RSGD + V T +QH DILT+AL R HR
Sbjct: 508 VFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGE---WPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDARYAD-TEDRRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAIALVQNPLSSGGMKHIDVRFHFIRGLFRSGDTSVKFVPTTEQHADILTQALSRASLQYHR 829
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE) HSP 1 Score: 283 bits (725), Expect = 2.560e-83 Identity = 141/326 (43.25%), Postives = 211/326 (64.72%), Query Frame = 1
Query: 1 IFRKMVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL*VCVCHSHNPTARHW*ALLRIAAYVNATKEIGLRFVRGSGLSLPVFADADYAAASNDRRSVSGLAVLLGDTAISWKSSTQKCVTTATCEAEYVALCDAAKEAIFERAFLVFLQPQLAGVCVGIFGDNEGAIAIANNPSSASRNKHFDVKFHFIQGLVRSGDIRILNVGTKDQHVDILTKALWRKKFMVHR 978
+FRKMV+ +++ ++ DDI+V+G ++ C+E L+ L K+FP K+ G+ + + GCA ERD + G L I+Q + +M+ ++ + + S IPA+PG+DL P+ E E GG R +GS+MW+S + PD++ A+ H+H P RHW A+ + Y+ T+++G+ + RGSGL L ++ DA YA + DRRSVSGLA +G T +S S TQ V+ ++ EAEY+A + KEA+F RA L F+ P+ +G + + DN+GAIA+ NP S+ R KH DV FHFI+GL RSGDI + V T +QH D+LTKAL R + HR
Sbjct: 946 VFRKMVDEVAVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVKGGTLRISQTAYIGSMVKRFDVQSTSRIPATPGVDLVPKREDEEGGE---WPRREAIGSMMWVSTFSLPDVSFAVRAVARHAHAPAKRHWDAIQKTLGYLKETRDLGIAYQRGSGLGLAMYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVTFHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRASLLYHR 1267
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 281 bits (719), Expect = 4.430e-82 Identity = 143/326 (43.87%), Postives = 209/326 (64.11%), Query Frame = 1
Query: 1 IFRKMVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL*VCVCHSHNPTARHW*ALLRIAAYVNATKEIGLRFVRGSGLSLPVFADADYAAASNDRRSVSGLAVLLGDTAISWKSSTQKCVTTATCEAEYVALCDAAKEAIFERAFLVFLQPQLAGVCVGIFGDNEGAIAIANNPSSASRNKHFDVKFHFIQGLVRSGDIRILNVGTKDQHVDILTKALWRKKFMVHR 978
+FRK+V+GK ++ ++ DDI+ G + +E L+ L+K PVK G+ Y GCA ERD E G ++QK + ++ ++GIT ++ PA P DLGP+ + E G + R +G LMW + TRPDIA AL ++H PT R W AL++I +Y+NAT ++G+ +VRGSGL L V+ DA YA RRSV+G+AV +G T +S S TQ+ V+ +T EAEY+A + KEA+F RA L F+ P+ +G + + DN+GAI++ NP S++R+KH DV+FHFI+ L +SG I + + T +QH D+LTKAL R K HR
Sbjct: 1469 VFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDDEPGVDKPV---RQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHR 1791
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 280 bits (715), Expect = 5.240e-82 Identity = 142/326 (43.56%), Postives = 209/326 (64.11%), Query Frame = 1
Query: 1 IFRKMVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGCAFERDWENGILEINQKTFAENMITQYGITAVSNIPASPGMDLGPRVEGETGGNDEFGDYRALVGSLMWMSVMTRPDIANAL*VCVCHSHNPTARHW*ALLRIAAYVNATKEIGLRFVRGSGLSLPVFADADYAAASNDRRSVSGLAVLLGDTAISWKSSTQKCVTTATCEAEYVALCDAAKEAIFERAFLVFLQPQLAGVCVGIFGDNEGAIAIANNPSSASRNKHFDVKFHFIQGLVRSGDIRILNVGTKDQHVDILTKALWRKKFMVHR 978
+FRK+V+GK ++ ++ DDI+ G + +E L+ L+K PVK G+ Y GCA ERD E G ++QK + ++ ++GIT ++ PA P +LGP+ + E G + R +G LMW + TRPDIA AL ++H PT R W AL++I +Y+NAT ++G+ +VRGSGL L V+ DA YA RRSV+G+AV +G T +S S TQ+ V+ +T EAEY+A + KEA+F RA L F+ P+ +G + + DN+GAI++ NP S++R+KH DV+FHFI+ L +SG I + + T +QH D+LTKAL R K HR
Sbjct: 916 VFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPV---RQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHR 1238 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig180478.4805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig180478.4805.1 >prot_H-elongata_contig180478.4805.1 ID=prot_H-elongata_contig180478.4805.1|Name=mRNA_H-elongata_contig180478.4805.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp MVNGKFSLMVGVHFDDIIVSGENDVCDEFLSELKKRFPVKHQGKLKMYTGback to top mRNA from alignment at H-elongata_contig180478:2..979+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig180478.4805.1 ID=mRNA_H-elongata_contig180478.4805.1|Name=mRNA_H-elongata_contig180478.4805.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=978bp|location=Sequence derived from alignment at H-elongata_contig180478:2..979+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig180478:2..979+ >mRNA_H-elongata_contig180478.4805.1 ID=mRNA_H-elongata_contig180478.4805.1|Name=mRNA_H-elongata_contig180478.4805.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=798bp|location=Sequence derived from alignment at H-elongata_contig180478:2..979+ (Himanthalia elongata Himel1 dioecious)back to top |